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1.
In the last decade, the cabbage seedpod weevil (Ceutorhynchus obstrictus (Marsham)) has become a major insect pest of canola (Brassica napus L.) in Canada reducing seed yields up to 35%. Therefore, the benefits of developing weevil resistant germplasm to canola breeders and the industry would reduce input costs, pesticide use, environmental degradation and increase yield. Yellow mustard (Sinapis alba L.) is resistant to C. obstrictus (CSPW), although the exact mechanism is not known (McCaffrey et al. 1999). A unique canola population was generated at the University of Guelph from a cross between B. napus and S. alba through embryo rescue and backcrossed to canola several times prior to double haploid (DH) production. Approximately one-half of this DH population had canola quality glucosinolate concentration (<16 μmol/g) and was used for further breeding. The hypothesis was that some DH progeny from this cross inherited resistance to CSPW from S. alba. Weevil infestation levels were assessed for the B. napus × S. alba BC2 and BC3 DH populations in the field over 7 years in Alberta where weevil pressure is strong to establish the resistant or susceptible status of these lines. The basic objectives for this study were to confirm field resistance in the B. napus × S. alba germplasm in Ontario and to identify any biochemical markers associated with resistance/susceptibility. Canola doubled haploid lines derived from BC2 or BC3 families were field screened for resistance (R) followed by chemical analysis of glucosinolates to detect biochemical polymorphisms correlated with CSPW resistance using High Performance Liquid Chromatography (HPLC). Two polymorphic peaks were found, one each, from extracts of upper cauline leaves and Stage 3 pod seed, with retention times of ~23 and 19 min, respectively. These HPLC peaks consistently correlated with larval infestation data and the peak differences between R and S DH lines were significant. Therefore, these two peaks can be considered as biochemical markers in this breeding germplasm and may play a role in rapid and early detection of CSPW resistance.  相似文献   

2.
Knowledge of genetic relationships in crop breeding programs provides valuable information that can be used by plant breeders as a parental line selection tool. In Upland cotton (Gossypium hirsutum L.), the Pee Dee germplasm program represents one of the most historically significant Upland cotton breeding programs and is known as a key source of fiber quality genes for commercial cultivars. The foundation of the Pee Dee germplasm is known to represent an array of genetic diversity involving the hybridization of G. hirsutum L., G. barbadense L., and triple hybrid strains (G. arboreum L. × G. thurberi Todaro × G. hirsutum L.). In this study, we characterized genetic relationships within the Pee Dee germplasm collection using molecular marker and field performance data. Molecular marker and field performance data showed the Pee Dee germplasm collection still maintains useful amounts of genetic diversity. The methods described provide plant breeders of cotton and other crops a strategy to develop a parental line selection tool based on genotypic and phenotypic information. Cotton breeders can directly use the information provided to select specific Pee Dee germplasm parental line combinations based on genotypic (molecular marker) and phenotypic (field performance) information rather than relying on pedigree and phenotypic information alone.  相似文献   

3.
Jatropha (Jatropha curcas L.) is widely distributed in the tropics with a promise for use as an oil crop for biodiesel. Understanding population genetic structure and diversity of J. curcas is important for germplasm collection and planning for breeding programs. Twelve 5′-anchored simple sequence repeat primers were selected and used for evaluation of population genetic structure and genetic diversity of J. curcas accessions collected from different regions within Thailand and introduced from other countries. A moderate level of genetic variation was found in all accessions studied. Cluster analysis did not reflect geographical distance in general as revealed by the Mantel test. An analysis of molecular variance showed that the majority (83.3%) of genetic diversity was within populations, indicating a high level of overlap and little population subdivision with respect to geographic area. An absence of subpopulation structure among neighboring regions may be caused by exchanging germplasm with vegetative propagation. This study provides a basis for breeders on selection of parental material to maximize genetic polymorphism in J. curcas breeding programs.  相似文献   

4.
Genetic similarities (GS) based on molecular markers are well suited for direct exploration of relationships within a germplasm pool. The objectives of this study were to: (i) assess the genetic diversity in the European winter triticale germplasm by using AFLP markers, and (ii) compare the GS estimates of AFLP markers, simple sequence repeat (SSR) markers and MALÉCOT's coancestry coefficient (f). A representative set of 127 European winter triticale varieties and breeding lines, previously investigated with SSR, was assessed with 10 PstI/TaqI primer combinations (PC). AFLP analysis identified 344 polymorphic fragments with an average polymorphic information content per PC of 0.25 and a marker index of 8.56. GS‐values between genotypes (calculated after DICE) averaged 0.61 for AFLP and 0.43 for SSR. The mean f‐value was 0.06. Dendrograms based on ‘unweighted pair‐group method and arithmetic average’ showed no clear groupings within the triticale germplasm pool, but smaller clusters were consistently found. Both molecular marker systems were superior to the coancestry coefficient for genetic diversity assessment within the elite triticale germplasm.  相似文献   

5.
The use of molecular markers to detect polymorphism at DNA level is one of the most significant developments in molecular biology techniques. With the development of new next-generation sequencing technologies, the discovery of SNP became easier and faster, and the costs of data point were reduced. The development and use of SNP markers for coffee have provided new perspectives for the evaluation of genetic diversity and population structure via different statistical approaches. In this study, 72 Coffea canephora genotypes were analyzed to identify the SNP markers and apply them to genetic studies and selection of parents/hybrids in genetic breeding. As many as 117,450 SNP were identified using the RAPiD Genomics platform. After quality analyses, 33,485 SNP were validated for analyses of genetic diversity and population structure. Genotypes were separated based on their varietal groups, and Hybrids were differentiated using the clustering and Bayesian approach. Coffee accessions mistakenly identified in the germplasm and breeding program were detected. The Conilon varietal group presented the lowest genetic dissimilarity values, suggesting the introduction of new accessions in the germplasm bank. The highest genetic distances values were observed among genotypes of the heterotic groups (Conilon and Robusta). The markers were efficient in evaluating the genetic diversity and population structure of C. canephora. Promising crosses were selected within and between the varietal groups. Hybrids with greater genetic distances were selected, which were important for C. canephora breeding programs.  相似文献   

6.
Semi‐hybrids between genetically distant alfalfa (Medicago sativa subsp. sativa) populations may display heterosis whose extent is affected by the structure of genetic diversity across populations. This study aimed to assess the genetic diversity across three putative heterotic populations, one Italian, one Egyptian and one of semi‐erect germplasm from Eastern Europe, Canada and Spanish Mielga (EECM population). Each population was bred from ten parents after various selection cycles. Fifteen genotypes per population were characterized by 20 polymorphic SSR markers. The among‐population variance was over eightfold smaller than the average within‐population variance (2.05 vs. 17.24) and accounted for 10.6% of the total variation. GST = .090 across markers indicated modest population differentiation. Various diversity measures, multidimensional scaling, and cluster analysis of the genetic structure indicated that the Italian population was more distant from the EECM population than the Egyptian one. The EECM and Egyptian populations were the most distant geographically and genetically. EECM displayed widest intrapopulation variation, accordingly to its constitutive geographical diversity. In conclusion, this study indicates modest genetic differentiation between alfalfa populations even for geographically distant germplasm.  相似文献   

7.
The primitive, upland cotton landrace collection represents one of the untapped genetic resources in cotton breeding programs. Efforts to utilize these resources have been slow, but the development of day-neutral converted germplasm lines offers tremendous potential for broadening the genetic base in upland cotton. Using topcross hybrids involving elite germplasm from the unique Pee Dee germplasm enhancement program, we evaluated the breeding potential of a select number of day-neutral converted racestocks. The mean performance of parental lines and F2 topcross hybrids along with genetic effect estimates indicate that day-neutral converted germplasm lines decreased agronomic performance while increasing fiber quality performance. Results suggest that crosses between day-neutral converted racestocks and elite Pee Dee germplasm lines result in new allelic combinations associated with improved fiber quality performance that interact in a non-additive way. However, it appears that converted racestocks transmit negatively correlated alleles for agronomic performance and fiber quality. These negatively correlated allelic combinations present a major challenge for cotton breeding programs. Future efforts that incorporate DNA based selection methods to identify and fix introgressed segments from converted racestocks and their offspring should enhance the use of the genetic variation present in the primitive racestock germplasm accessions.  相似文献   

8.
Summary A crop's ability to productively exploit its environment depends on many adaptive features which are controlled by multiple genes, interacting among themselves and with the environment in complex ways.To promote widespread adoption, breeders frequently seek to develop broad adaptation in their varieties, often through the use of genes having a large effect on a single adaptive feature. Such genes may occur within the crop, its wild relatives, or unrelated taxa. Genes for many adaptive features (e.g. temperature tolerance) may be found in extreme environments. Others (e.g. photoperiod insensitivity) may have evolved away from primary centres of origin.Well characterized and documented ex situ germplasm collections aim to serve plant breeders' need for genes. Molecular marker and geographic information system (GIS) techniques are proving useful for locating and characterizing genetic diversity. New techniques (e.g. core collections and electronic information systems) are adding to the value of collections. Ex situ and in situ conservation of wild crop relatives are receiving increased attention. With all organisms becoming a potential source of genes for breeding, in situ ecosystem conservation is assuming added significance.Farmers, particularly in diverse, marginal environments in developing countries, continue to breed landraces adapted to their specific circumstances. In areas of high ecological diversity, a multitude of adaptive gene complexes have been selected within small geographic areas. Conventional breeding frequently neglects such farmers, and participatory methods based on locally adapted diversity, coupled with appropriate technical and policy support, may prove more effective in meeting their needs. Such dynamic, on-farm conservation and management systems would also enable genetic diversity to continue to evolve as a resource for conventional breeding.For genetic resources to remain a foundation for future sustainable agricultural development, complementary conservation and breeding strategies are needed.  相似文献   

9.
H.S. Kim  R.W. Ward 《Euphytica》2000,115(3):197-208
A set of 292 accessions of common wheat (Triticum aestivum L.) representing 21 germplasm pools based on geographical or breeding program origins was assayed for RFLP diversity. Thirty cDNA and genomic DNA probes and the HindIII restriction enzyme were employed for RFLP analysis. About 61% of all 233 scored bands were present in 75% or more of the accessions. All but one of the 30 probes revealed polymorphism, and the average number of distinct patterns per probe over all accessions was 9.5.Polymorphic Information Content (PIC) values within a pool varied from 0 to 0.9 and depended on the identities of both the germplasm pool and the probe. Rare banding patterns with a relative frequency of ≤0.2 within a pool were detected. These rare patterns were more likely to occur in pools exhibiting high levels of heterogeneity. The highest level of polymorphism was observed in the Turkish landraces from Southwest Asia. The Eastern U.S. soft red winter wheat germplasm pool was more genetically diverse than the other advanced germplasm pools, and nearly as diverse as the Turkish landrace pool. RFLP-based genetic relationships between germplasm pools generally tracked expectations based on common geographical origin, breeding history and/or shared parentages. The Chinese wheat landraces from Sichuan, Tibet, and Yunnan provinces were distinct from other pools. Similarity matrices for among-pool genetic distance estimates based on either band frequencies or banding pattern frequencies showed good correlation with matrices derived from Nei and Li's mean genetic similarity estimates (r=−0.82** and r=−0.73**, respectively. This revised version was published online in July 2006 with corrections to the Cover Date.  相似文献   

10.
Summary Utilization of exotic germplasm is one way to broaden genetic variation in breeding populations. This approach has recently been adopted in Sweden and Finland, where experimental barley populations has been established for research and pre-breeding purposes. The aim of the project is threefold: (1) to increase overall genetic diversity of Nordic barley breeding material; (2) to develop breeding material which possesses a high level of resistance for various barley diseases; and (3) to study effects of exotic germplasm on adaptation and agronomic performance. Both the Finnish and the Swedish barley populations include the same exotic material i.e. unadapted landraces from different parts of Asia and wild barley (Hordeum vulgare ssp. spontaneum) accessions. Locally adapted high-yielding barley lines were included in the populations. The establishment of these populations involved six crossing generations in order to promote recombination and enhance the break-up of linkage blocks. The paper discusses the third aim of the project. Studies on agronomic performance and adaptation showed that (1) agronomically valuable genotypes can be constructed through recombination using exotic germplasm for Nordic conditions, (2) that incorporation of exotic material is most successful when made in a local genetic base and (3) that exotic germplasm has an effect on adaptation.  相似文献   

11.
124 wheat cultivars and breeding lines were screened with 19 microsatellite (SSR) loci generating 160 scorable bands which were used to construct a genetic distance (GD) matrix. A distance matrix based on coefficient of parentage (COP) scores was also generated for the cultivars for which good pedigree records were available. The SSR and COP data for 101 of the wheat cultivars were compared with genetic distance scores obtained using1898 scorable restriction fragment length polymorphism (RFLP) bands previously generated. Phylograms were generated based on the SSR, RFLP,combined SSR and RFLP and COP data. The standardised Mantel's Z test showed that the distance matrices generated from all of the data sets were significantly correlated. Bootstrap analysis showed that, although the SSR and RFLP data were correlated, a large number of SSR loci are required for determining robust genetic relationships between large numbers of cultivars. In addition, accurate pedigree records are needed to determine genetic relatedness using COP. The molecular data were also used to determine the level of genetic variability within breeding programs and to assess the impact of the introduction of semidwarf and other germplasm. The results showed that the level of genetic diversity in Australian wheat cultivars has increased over time and that in particular, the introduction of semidwarf germplasm resulted in an increase in the overall diversity. This revised version was published online in August 2006 with corrections to the Cover Date.  相似文献   

12.
Fifteen amplified fragment length polymorphism (AFLP) EcoRI/MseI‐based primer combinations with five selective bases (Eco RI‐ANN, MseI‐CN) were used to estimate genetic diversity among 45 line varieties of cultivated cornsalad and 19 genebank accessions classified into nine different species related to cornsalad. Polymorphic fragments were scored for calculation of Jaccard's coefficient of genetic similarity (GS). The average GS estimate in elite germplasm (GS = 0.90) was substantially higher than in exotic germplasm (GS = 0.47). UPGMA‐cluster analysis revealed genetic relationships among recently bred varieties, old varieties and genebank accessions. Analysis of molecular variance indicated almost threefold variability within sets compared with between sets due to a high level of polymorphism among wild species. Sources for increasing genetic diversity in elite germplasm of cornsalad were suggested and a duplicate among the genebank accessions was detected. AFLPs could be considered a powerful tool for genetic diversity estimation in cornsalad germplasm and are recommended for systematic fingerprinting of remaining cornsalad species.  相似文献   

13.
N. M. Cowen  K. J. Frey 《Euphytica》1987,36(2):413-424
Summary Eight oat cultivars and experimental lines from four germplasm sources were crossed in a diallel mating design without reciprocals. F1 heterosis for grain yield was evaluated in two experiments, and 48 F2-derived lines from each of the 28 matings were evaluated for bundle weight, grain yield, straw yield, harvest index, height, and heading date in two experiments. Number of transgressive segregates per trait and generalized genetic variance were calculated for each mating. Genealogical distance for each mating was obtained by using coefficient of kinship based on the pedigree of the parents. The relationship between genealogical distance and the three types of breeding behaviour was examined via correlation and regression. Significant correlations occurred only for genealogical distance with numbers of transgressive segregates for height and with generalized genetic variances. Both were positive. Significant heterosis was observed for matings of more distantly related parents. Regressions on genealogical distance, when significant, were linear. Genealogical distance between parents was positive associated with diversity on the basis of breeding behavior.Journal Paper No. J-11874 of the Iowa Agriculture and Home Economics Station, Iowa State Univ., Ames, IA 50011. Project 2447.  相似文献   

14.
Genetic diversity of 18 Brassica nigra accessions was estimated using amplified fragment length polymorphism (AFLP) marker technology. Two B. rapa and two B. juncea accessions were selected as outliers in the study. Eight AFLP primer combinations generated a total of 426 bands, of which 79% were polymorphic. The UPGMA method was employed to construct a dendrogram based on the Jaccard's similarity coefficient. The accessions of B. rapa separated from those of B. nigra at a genetic similarity coefficient of 0.27 while those of B. juncea did so at 0.5. The genetic similarity coefficients within the B. nigra accessions ranged from 0.58 to 0.86. Based on these coefficients it was concluded that the B. nigra accessions show high levels of genetic variation. These results have significant implications in the crop improvement programmes for the agronomically important crop B. juncea, an amphidiploid of B. nigra and B. rapa. Two incorrectly labelled B. nigra accessions were also identified. These accessions were found to cluster with those of B. juncea accessions. This result demonstrates the great value of AFLP markers in the management of genebanks.  相似文献   

15.
Two glasshouse and two field experiments were conducted in 2013 and 2014 to compare the relative importance of four physiological traits: osmotic adjustment (OA), leaf proline concentration, canopy temperature depression (CTD) and root depth on drought performance of canola quality B. juncea (juncea canola). Glasshouse experiments were conducted at The University of Melbourne, Parkville, and field experiments were conducted at Horsham, Victoria. The experiments used juncea canola hybrids and their parental lines and were laid out in a randomised complete block design with three replications. The glasshouse experiments consisted of two treatments, well watered and water deficit from first open flower to maturity, whereas the field experiments were sown at a site that received 266 mm annual rainfall in 2014. In the glasshouse, canopy temperature depression was the only trait to show a positive and consistent association with drought performance of juncea canola. Cooler canopy temperature was also associated with improved yield in field experiments. Root depth was positively correlated with CTD in 2014 in glasshouse, whereas no correlation of root depth with OA and leaf proline was observed. The results indicated that CTD was the only reliable trait among those tested to screen juncea canola for drought tolerance. Root depth of juncea canola hybrids was a constitutive trait and probably was a result of hybrid vigour.  相似文献   

16.
Plant breeders disrupt Hardy–Weinberg equilibrium through selection, non‐random mating, drift, migration and mutation. Sustainable plant breeding can be defined as productive and competitive breeding that is achieved without loss of genetic diversity in the elite breeding population during the professional career of the breeder. Breeding is often productive but not sustainable. From 1974 to 2000, the animal breeding programme Meatlinc in the United Kingdom had effective population size of 95, population inbreeding of 0.19% per year and generation interval of 2.15 years. Genetic progress in Meatlinc tripled in the 8 years following introduction of best linear unbiased prediction (BLUP) selection (based on the information from relatives) in 1992. Canola breeding in Australia from 1970 to 2000 had longer generation interval (6 years), smaller effective population size (<11) and higher rates of inbreeding (>0.7% per year). BLUP selection in canola was first reported in 2010. Neither programme replaced genetic diversity lost through selection and drift. Most breeding programmes violate conditions of the infinitesimal model, thereby reducing predictability of selection, but breeders can minimize these limitations to sustainable plant breeding.  相似文献   

17.
Summary Lentil is a self-pollinating diploid (2n = 14 chromosomes) annual cool season legume crop that is produced throughout the world and is highly valued as a high protein food. Several abiotic stresses are important to lentil yields world wide and include drought, heat, salt susceptibility and iron deficiency. The biotic stresses are numerous and include: susceptibility to Ascochyta blight, caused by Ascochyta lentis; Anthracnose, caused by Colletotrichum truncatum; Fusarium wilt, caused by Fusarium oxysporum; Sclerotinia white mold, caused by Sclerotinia sclerotiorum; rust, caused by Uromyces fabae; and numerous aphid transmitted viruses. Lentil is also highly susceptible to several species of Orabanche prevalent in the Mediterranean region, for which there does not appear to be much resistance in the germplasm. Plant breeders and geneticists have addressed these stresses by identifying resistant/tolerant germplasm, determining the genetics involved and the genetic map positions of the resistant genes. To this end progress has been made in mapping the lentil genome and several genetic maps are available that eventually will lead to the development of a consensus map for lentil. Marker density has been limited in the published genetic maps and there is a distinct lack of co-dominant markers that would facilitate comparisons of the available genetic maps and efficient identification of markers closely linked to genes of interest. Molecular breeding of lentil for disease resistance genes using marker assisted selection, particularly for resistance to Ascochyta blight and Anthracnose, is underway in Australia and Canada and promising results have been obtained. Comparative genomics and synteny analyses with closely related legumes promises to further advance the knowledge of the lentil genome and provide lentil breeders with additional genes and selectable markers for use in marker assisted selection. Genomic tools such as macro and micro arrays, reverse genetics and genetic transformation are emerging technologies that may eventually be available for use in lentil crop improvement.  相似文献   

18.
Elaeis oleifera or ‘caiaué’, a close relative of oil palm (E. guineensis), has some agronomic traits of great interest for the oil palm genetic breeding such as slow growth, oil quality (mostly unsaturated) and disease resistance. An analysis of a Brazilian oil palm germplasm collection was carried out using RAPD (Random Amplified Polymorphic DNA) markers with the objective of understanding the genetic variation of ‘caiaué’ accessions collected in the Amazon Forest in the last two decades. A sample of 175 accessions obtained along the Amazon River Basin was analyzed and compared to 17 accessions of oil palm from Africa. Ninety-six RAPD markers were used in the analysis, of which fourteen were shown to be specific to oil palm, while twelve were specific to ‘caiaué’. Results showed that the Brazilian ‘caiaué’ accessions studied have moderate levels of genetic diversity as compared to oil palm accessions. The data allowed the establishment of similarity groups for ‘caiaué’ accessions, which is useful for selecting parental plants for population breeding. Cluster analysis showed that, in general, genetic similarities are not correlated to geographical distances, but consistent with geographical dispersal along the Amazon River network. AMOVA showed that most of the genetic variation is found within populations, as expected for anallogamous and long-lived perennial species. The study provides important information to define strategies for future collection expeditions, for germplasm conservation and for the use of E. oleifera in breeding programs. This revised version was published online in August 2006 with corrections to the Cover Date.  相似文献   

19.
Random amplified polymorphic DNA (RAPD) markers were used to develop genetic fingerprints and analyse genetic relationships among 29 Ipomoea accessions from different geographical locations around the world, including unique wild species, and reproducible profiles were obtained for all accessions using random decamer primers. The primers generated 46 polymorphic markers, one primer alone having 10 products, enabling the discrimination of all 29 accessions. A high level of genetic variability in sweet potato collections was suggested by the degree of polymorphism. Half of the Japanese land races were closely related while accessions from Papua New Guinea and The Philippines were distinct and exhibited the greatest genetic diversity. The wild species Ipomoea gracilis and Ipomoea tiliacea formed a group distinct from the cultivated sweet potato. The wild tetraploid accession K233 and the species Ipomoea trifida were progressively more related genetically to the cultivated sweet potato and are the probable progenitors of Ipomoea batatas, and may be suitable as germplasm for genetic enhancement. RAPDs proved to be useful for sweet potato systematics and should be valuable for germplasm management, gene tagging and efficient choice of parents in breeding programmes.  相似文献   

20.
Summary We examined the inheritance, heritability, and breeding behaviour of resistance to Septoria tritict in the spring wheat cultivars Seabreeze, Veranopolis, and IAS-20 in crosses to the susceptible Australian spring cultivar Gamenya. Resistance in Seabreeze was higher than that in Veranopolis and IAS-20. Inheritance of resistance in Seabreeze seems to be determined by at least three recessive genes. Resistance in Veranopolis and IAS-20 might be due to a single gene. Similarity of inheritance patterns and breeding behaviour of the resistance from Veranopolis and IAS-20 and the common ancestry of these two cultivars suggest that they may carry the same gene. Standard unit heritabilities of Septoria scores, as measured by correlation of F2 plant with F3 family mean data, were high (57–68%). Parent offspring genetic correlations confirmed previously reported associations between resistance and lateness and resistance and tall plant height, but correlations were not sufficiently high to be a major obstacle to selection. Resistance in Veranopolis and IAS-20 were easily recovered in first backcrosses while that in Sea breeze was more difficult to recover.Contribution from the Department of Agriculture Western Australia.  相似文献   

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