共查询到20条相似文献，搜索用时 15 毫秒
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The cultivation of soft‐seeded pomegranate is an important direction in pomegranate breeding. To comprehensively understand the molecular mechanisms involved in the formation of soft‐seeded pomegranate (Punica granatum. var. Hongmanaozi), we established an expressed sequence tag (EST) resource. Two thousand valid sequences were generated, from which 907 unigenes were obtained after initial assembly using the clustalx program. Among these unigenes, 51 showed no similarity to any protein in the public databases, 433 matched with proteins of unknown function, and 423 matched with proteins of known or putative functions. The 423 unigenes were further classified into 13 categories. Among these categories, protein synthesis, cell structure, protein destination and storage, secondary metabolism, signal transduction and transporters accounted for 8%, 8%, 4%, 7%, 6% and 17%, respectively. We also successfully developed 10 highly polymorphic expressed sequence tag‐simple sequence repeat (EST‐SSR) markers for pomegranate. The results provide a new tool for future activities in pomegranate breeding. 相似文献
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A set of simple sequence repeat (SSR or microsatellite) markers was used to discriminate a collection of 33 Spinacia oleracea hybrid cultivars from seven different breeding stations all over the world. All SSR markers were genic microsatellite markers located in coding or non-coding regions of genes of known function. Cluster analysis based on 13 of the SSR markers showed that the spinach hybrids grouped into three clusters. The first two clusters consisted of European spinach types, which were well discriminated according to their origin from different breeding stations. The third cluster was a mixture of Asian as well as European types of spinach. Subclusters in this group did not reflect differences in morphology, earliness or company origin. The data show that genic microsatellites are a powerful tool for discrimination of spinach cultivars. 相似文献
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R. K. Saxena C. Prathima K.B. Saxena D. A. Hoisington N. K. Singh R. K. Varshney 《Plant Breeding》2010,129(2):142-148
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Y. A. S. Hamdan M. J. García‐Moreno J. Redondo‐Nevado L. Velasco B. Pérez‐Vich 《Plant Breeding》2011,130(2):237-241
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Wild soybean (Glycine soja), as the progenitor of soybeans (G. max), is widely distributed in China and has been collected as a supplementary germplasm pool of soybeans. In this study, 375 wild soybean accessions from a set of genebank core collection were analysed for genetic diversity by using 42 simple sequence repeat primer pairs. The mean allele number per locus was 19.62. Ten‐percent unique alleles involving 35 or 83.33% loci differentiated among the geographical regions. The mean gene diversity (h) per locus was 0.89. A very low mean coefficient of gene differentiation (GST = 0.08) for geographical regions and a high mean within‐region gene diversity (HS = 0.81) were observed, indicating that most genetic diversity existed within the regions. There was an obvious relationship between genetic distance and geographical distance. The results showed multiple centers of genetic diversity for Chinese wild soybean in North China, the Huanghe River Valley, and Central China as well as the Changjiang River Valley, implicating multiple site origins of soybeans within China. 相似文献
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A total of 140 Indian accessions of Papaver somniferum were raised under the subtropical conditions of Lucknow, India. They were screened for major alkaloids present in the capsules and peduncles, using a TLC-densitometry procedure. An accession containing the narcotic alkaloid morphine at as low a concentration as 0.05% in its capsules has been identified. The accession has good agronomic traits. 相似文献
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Jing‐yi Wang Bing‐zhi Huang Ye‐yuan Chen Su‐ping Feng Yao‐ting Wu 《Plant Breeding》2011,130(5):584-590
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Tsuneki Tanaka Hiroyuki Tamaki Kazunori Ashikaga Hiroki Fujii Toshihiko Yamada 《Plant Breeding》2013,132(2):144-148
Molecular marker technologies may provide a tool to overcome the forage yield plateau in timothy (Phleum pratense L.). Therefore, a study was designed to investigate the relationship between marker‐based genetic distance (GD) estimates and yield. Genetic distances were estimated using Dice coefficients framed by 28 simple sequence repeat markers. In Experiment 1, parents with high general combining ability (GCA) from two contrasting first‐generation synthetic strains (exhibiting high and low yields) were compared. Average GDs of each strain were 0.74 (high) and 0.68 (low). These differences indicated that GD may be partially the basis for contrasting yields. In Experiment 2, GDs among 40 parents of a polycross were used for calculating general genetic distance (GGD), which is indicative of their allelic complementation. Analyses revealed a significant (P < 0.01) moderate correlation (r) between GGD and GCA for yield (r = 0.45) and a significant (P < 0.01) residual mean square for the regression of yield on GGD, suggesting that considerable non‐additive effects were associated with GCA. The results are indicative of the potential use of GD estimation for yield improvement in timothy. 相似文献
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Bringing wild relatives back into the family: recovering genetic diversity in CIMMYT improved wheat germplasm 总被引：6，自引：0，他引：6
M. L. Warburton J. Crossa J. Franco M. Kazi R. Trethowan S. Rajaram W. Pfeiffer P. Zhang S. Dreisigacker M. van Ginkel 《Euphytica》2006,149(3):289-301
Summary The dangers of a narrow genetic base of the world's major domesticated food crops have become a great global concern in recent decades. The efforts of the International Maize and Wheat Improvement Center (CIMMYT) to breed common wheat cultivars for resource poor farmers in the developing world (known as the Green Revolution wheats) has met with notable success in terms of improved yield, yield stability, increased disease resistance and utilization efficiency of agricultural inputs. However, much of the success was bought at the cost of an overall reduction in genetic diversity in the species; average Modified Roger's distances (MRD) within groups of germplasm fell from 0.64 in the landraces to a low of 0.58 in the improved lines in the 1980s. Recent efforts by CIMMYT breeders to expand the genetic base of common wheat has included the use of landraces, materials from other breeding programs, and synthetic wheats derived from wild species in the pedigrees of new advanced materials. The result, measured using SSR molecular markers, is a highly significant increase in the latent genetic diversity of recently developed CIMMYT breeding lines and cultivars compared to the original Green Revolution wheats (average MRD of the latest materials (0.63) is not significantly different from that of the landraces, as tested using confidence intervals). At the same time, yield and resistance to biotic and abiotic stresses, and end-use quality continue to increase, indicating that the Green Revolution continues to this day. 相似文献
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Raghvendra K. Mishra Baniekal H. Gangadhar Akula Nookaraju Sushil Kumar Se W. Park 《Plant Breeding》2012,131(1):118-124
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For the purposes of genetics and application the number of simple sequence repeat (SSR) markers in rye has to be increased significantly to cover the entire genome. To this end, more than 8000 publicly accessible rye cDNA sequences from anthers, cold‐stressed leaves, and aluminium‐stressed and unstressed roots were exploited as a resource for SSR marker development. A total of 157 Secale cereale micro‐satellite (SCM) loci out of 528 SSRs comprising di‐, tri‐ and tetra‐nucleotide motifs could be assayed on automated sequencers. One‐hundred expressed sequence tag (EST)‐derived SCM loci displayed a length polymorphism among a sample of 15 rye accessions. Of the SCM, 45% could be associated with proteins of known or unknown function. Recently published ESTs from different rye tissues proved to be a valuable resource for SSR marker development in rye. 相似文献
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Guineagrass ( Panicum maximum Jacq.) is one of the major forage grasses in tropical and semitropical regions, largely apomictic and predominantly exist as tetraploid. Non-availability of polymorphic molecular markers has been a major limitation in its characterization and improvement. We report isolation and characterization of microsatellites in P. maximum and cross-species results with other five Panicum species. Based on microsatellite-motifs, 15 functional and polymorphic simple sequence repeat (SSR) primer-pairs were designed, validated and employed in estimating genetic relationship among 34 guineagrass accessions. Thirteen primer-pairs amplified single locus and remaining two generated more than two loci with an average of 3.57 bands per locus amounts to 63 bands with 34 guineagrass accessions. Average expected heterozygosity ( H E ) of 0.35 (maximum 0.97) and observed heterozygosity ( H O ) of 0.37 (maximum 0.91) established the efficiency of developed markers for discriminating guineagrass accessions. Dice's similarity coefficients-based unweighted pair group with arithmetic average method-clustering supported with high bootstrap values (≥40) indicated its significance and distinguished all accessions except IG97-93 and IG97-6. Utility of these new SSR loci in genetic diversity study of P. maximum and other cross–amplified species is discussed. 相似文献
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旨在为龙眼资源的分子鉴定和变异分析提供技术支持。以85份龙眼种资资源为试材,利用荧光标记的毛细管电泳技术对龙眼资源进行SSR检测、群体多样性和指纹图谱分析。7对SSR引物检测到29个等位基因,每对引物的等位基因数在3～7之间,平均为4.14个。有效等位基因数(Ne)范围在1.52～3.133之间,平均2.175,有效等位基因所占比例为52.49%。群体平均Shannon遗传多样性指数(I)为0.877;观测杂合度(Ho)的变化范围为0.341～0.782,平均值为0.51,期望杂合度(He)的变化范围为0.342～0.681,平均值为0.514,He的平均值大于0.5。85份龙眼资源遗传距离范围为0.00～0.635,平均为0.299。85份龙眼资源指纹图谱的构建,为生产上同名异物或同物异名的乱象鉴定提供了有效手段。 相似文献
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Short sequence repeats (microsatellite,SSR) and expressed sequence tags-SSR (EST-SSR) markers were employed to analyze the genetic diversity of natural colored cotton varieties.About 490 pairs of SSR markers spanning the 26 chromosomes were selected from the cotton microsatellite database,they were composed of the NAU,BNL,MUSS,and CIR markers,and there was one marker every 5 cM on average. 相似文献
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Moriyuki Shoda Naoya Urasaki Sumisu Sakiyama Shingo Terakami Fumiko Hosaka Narumi Shigeta Chikako Nishitani Toshiya Yamamoto 《Breeding Science》2012,62(4):352-359
We developed 18 polymorphic simple sequence repeat (SSR) markers in pineapple (Ananas comosus) by using genomic libraries enriched for GA and CA motifs. The markers were used to genotype 31 pineapple accessions, including seven cultivars and 11 breeding lines from Okinawa Prefecture, 12 foreign accessions and one from a related species. These SSR loci were highly polymorphic: the 31 accessions contained three to seven alleles per locus, with an average of 4.1. The values of expected heterozygosity ranged from 0.09 to 0.76, with an average of 0.52. All 31 accessions could be successfully differentiated by the 18 SSR markers, with the exception of ‘N67-10’ and ‘Hawaiian Smooth Cayenne’. A single combination of three markers TsuAC004, TsuAC010 and TsuAC041, was enough to distinguish all accessions with one exception. A phenogram based on the SSR genotypes did not show any distinct groups, but it suggested that pineapples bred in Japan are genetically diversed. We reconfirmed the parentage of 14 pineapple accessions by comparing the SSR alleles at 17 SSR loci in each accession and its reported parents. The obtained information will contribute substantially to protecting plant breeders’ rights. 相似文献