Native soil organic matter as a decisive factor to determine the arbuscular mycorrhizal fungal community structure in contaminated soils

The present study of arbuscular mycorrhizal (AM) fungi is focused on the identification of AM ecotypes associated with different plants species (Poa annua, Medicago polymorpha, and Malva sylvestris) growing in three contaminated soils with different organic matter, phosphorus, and trace element (TE; Cu, Cd, Mn, and Zn) contents. Soils were amended with biosolid and alperujo compost. Shifts in AM fungal community structure, diversity, richness, root colonization, and plant TE uptake were evaluated. Soil properties and plant species had a significant effect on AM fungal community composition as well as on root colonization. However, AM fungal diversity and richness were only affected by soil properties and especially by soil organic matter that was a major driver of AM fungal community. As soil quality increased, Glomeraceae decreased in favor of Claroideoglomeraceae in the community, AM fungal diversity and richness increased, and root colonization decreased. No effect due to amendment (exogenous organic matter) addition was found either in AM fungal parameters measured or TE plant uptake. Our results revealed that the role of TE contamination was secondary for the fungal community behavior, being the native organic matter content the most significant factor.     

等碳投入的有机肥和生物炭对红壤微生物多样性和土壤呼吸的影响

施用有机肥是快速培育瘠薄土壤的一个重要措施。针对中亚热带第四纪红黏土发育的红壤旱地,建立了玉米和花生单作系统等碳量投入有机肥和生物炭的田间试验,利用聚合酶链式反应—变性梯度凝胶电泳(polymerase chain reaction-denaturing gradient gel electrophoresis,PCR-DGGE)方法研究了土壤细菌和真菌群落组成和多样性的变化,分析了土壤呼吸速率(CO2通量)的变化及其与微生物多样性的关系。两年的试验表明,不同施肥方式导致微生物群落结构显著分异,施用有机肥和生物炭显著增加了细菌多样性,但施肥第二年真菌多样性有下降趋势。秸秆和猪粪配施显著增加了土壤呼吸速率,土壤呼吸速率与细菌和真菌多样性呈显著正相关,细菌多样性对土壤呼吸的影响(相对贡献率为71%)显著高于真菌(29%)。土壤磷素(全磷和速效磷)含量的变化是驱动红壤微生物多样性变化的主导因素,其对细菌和真菌多样性的相对贡献率分别为44.8%和47.4%。因此,合理配施秸秆和猪粪可以快速提高瘠薄红壤的生物功能。     

Dwarf mistletoe effects on soil basidiomycete community structure, soil fungal functional diversity, and soil enzyme function: Implications for climate change

We used a combination of molecular, culture and biochemical methods to test the hypothesis that severe infection of pine by dwarf mistletoe (genus Arceuthobium) has significant effects on structure and function of soil fungal communities, and on carbon cycling in soils. PCR and DNA sequencing of the basidiomycete communities in paired blocks of uninfected and infected trees revealed: (1) that the top, organic soil layer in this system is inhabited almost exclusively by ectomycorrhizal fungi; (2) no difference in species richness (6 species core⁻¹ in both) or Shannon-Wiener evenness (0.740 and 0.747 in uninfected and infected blocks respectively), however Shannon-Wiener diversity was significantly greater in infected blocks (1.19 vs 1.94 in uninfected and infected blocks respectively, P < 0.05); (3) significant differences in basidiomycete species composition, with nearly complete absence of two system co-dominant Russula species in infected blocks, and replacement of one co-dominant Piloderma species with another in infected plots, indicating physiological variability within the genus. Soil fungal physiological diversity measured using the Fungilog system was significantly greater in terms of both number of carbon substrates used by culturable soil fungi (both ascomycetes and basidiomycetes) in infected blocks, and the rate at which these substrates were used. Soil enzyme assays revealed greater laccase, peroxidase, and cellulase activities in soils associated with infected trees. Thus, event cascades associated with severe dwarf mistletoe infection not only significantly affected soil fungal species composition and increased species diversity, but also impacted on carbon-related function and functional diversity. Given the geographic range of this pathogen, and forecasts that epidemics of this disease will increase in range in severity with global climate change, these effects have the potential to significantly impact local and global carbon budgets.     

生草栽培对南丰蜜橘园土壤微生物群落结构与功能特征的影响

为探究橘园生草对土壤微生物群落结构与功能特征的影响,本研究以南丰蜜橘(Citrus reticulita Blanco cv.Kinokuni)为研究对象,设置行间播种白三叶草(Trifolium repens)、黑麦草(Lolium multiflorum)、自然生草和清耕4个处理,采用荧光定量PCR技术和Illum...     

Nitrogen and water addition regulate soil fungal diversity and co-occurrence networks

Purpose

A field experiment was conducted to assess the role of nitrogen (N) and water addition in shaping soil fungal communities and co-occurrence networks in temperate grassland, northern China.

Materials and methods

We measured soil fungal and plant community compositions, and also soil properties including available N, phosphorus, potassium concentrations, soil pH, and soil moisture. Soil fungal co-occurrence networks were constructed using a random matrix theory–based network inference approach.

Results and discussion

Plant species richness was decreased by N addition but increased by water addition, whereas fungal richness was decreased by N addition. The fungal community composition was significantly changed by both N addition and water addition. Soil fungal α diversity and β diversity were explained by a combination of variations in plant species richness and plant functional composition, and also by changes in soil pH via the soil acidification pathway induced by N and water addition. The fungal co-occurrence networks were more complex and clustered under water addition than that in ambient precipitation.

Conclusions

Our results suggested that plant functional composition, plant species richness, and soil acidification should be incorporated into ecosystem models for predicting soil fungal communities under future climate changes in terrestrial ecosystems.

     

Habitat selective factors influencing the structural composition and functional capacity of microbial communities in agricultural soils

Key physicochemical factors associated with microbial community composition and functions in Australian agricultural soils were identified. Soils from seven field sites, with varying long-term agricultural management regimes, were characterised physicochemically, on the basis of their bacterial and fungal community structures (using PCR-DGGE), and by assessing potential catabolic functions (MicroResp?). Soil type, rather than agricultural management practice, was the key determinant of microbial community structure and catabolic function (P<0.05). Following multivariate analysis, soil pH was identified as the key habitat-selective physicochemical soil property associated with variation in biological diversity and profiles of organic substrate utilisation. In particular, the capacity of soils to catabolise different C-substrates was closely correlated (ρ=0.604, P=0.001) to pH. With decreasing pH, the catabolism of common low molecular weight organic compounds (especially cysteine and aspartic acid) declined, however catabolism of two others (lysine and arginine) increased. Shifts in the capacity of soil microbiota to cycle common organic compounds have implications for overall geochemical cycling of C and N in acidifying soils. The genetic structure of the bacterial communities in soil strongly correlated with pH (ρ=0.722; P=0.001) and that of soil fungi with pH and % sand (ρ=0.323; P=0.006). Catabolic function was more closely associated with the structure of the bacterial than fungal communities. This work has shown that soil pH is a primary driver of microbial diversity and function in soil. Agricultural management practices thereby act to selectively shift populations and functions against this background.     

嘎隆拉山铁杉林土壤线虫群落结构与多样性研究

为了解西藏墨脱嘎隆拉山铁杉林土壤生态系统线虫群落的结构及多样性特征,采用种类组成、个体密度、多样性指数、功能性指数等特征值分析土壤线虫群落结构及多样性特点,并通过冗余分析及线性相关性分析探讨线虫群落与土壤理化性质间的关系.结果显示,嘎隆拉山铁杉林土壤线虫隶属于5目29科34属,个体密度介于0～1231条?100 g–1...     

高速公路路域土壤特性分析及其质量评价

为深入研究不同扰动方式对路域土壤理化特性的影响,及路域不同部位土壤的特性,以高速公路路基、路堑、弃渣场、路肩、取土场5个部位的土壤为研究对象,对采集土壤样品的理化指标进行测定和分析。结果表明:挖和填两种扰动方式对土壤质地影响不显著,含水量及容重表现为:挖方>填方>自然;路域不同部位土壤含水量、容重呈现出取土场>路堑>路基>路肩>弃渣场>自然,土壤有机质和全氮的含量呈现为:自然>路肩>路基>路堑>弃渣场>取土场;扰动土壤的有机质、全氮和速效钾含量低于自然土壤,速效磷和全磷含量高于自然土壤;扰动土壤的机质和全氮极显著相关,全氮与无机氮显著相关,与速效钾极显著相关、与速效磷负相关、容重和无机氮负相关;路域土壤有机质、全氮、全磷缺乏,土壤肥力低。     

硒砂瓜连作对土壤真菌群落结构的影响

硒砂瓜是宁夏地区重要的经济作物,其连作严重影响硒砂瓜产量和品质。目前硒砂瓜连作对土壤真菌群落结构的影响尚不清楚。本研究采用Illumina MiSeq高通量测序技术,探讨硒砂瓜连作对土壤真菌群落结构的影响。研究发现,硒砂瓜连作土壤中真菌群落多样性指数和丰富度指数随连作年限的增加先上升后下降。供试土壤样本中共检测到真菌8门、25纲、244属,其中子囊菌门（Ascomycota）、接合菌门（Zygomycota）是优势菌门,占90%以上。与对照相比,连作30年土壤中子囊菌门丰度下降32.51%,接合菌门丰度上升29.89%。供试土壤中真菌主要的优势属为被孢霉属（Mortierella）、绿僵菌属（Metarhiziun）、假霉样真菌属（Pseudallescheria）、镰刀菌属（Fusarium）和青霉属（Penicillium）。与对照相比,连作5年土壤中假霉样真菌属丰度增加45.81%,连作10年土壤中镰刀菌属丰度增加26.74%,连作15年土壤中绿僵菌属下降26.83%,连作20年土壤中青霉属增加29.68%,连作25年土壤中绿僵菌属减少18.30%,连作30年土壤中被孢霉属丰度上升29.89%。土壤理化性质与硒砂瓜连作年限间无显著相关性,而与土壤真菌群落结构存在显著的相关性。土壤全磷、碱解氮、有效磷含量是影响土壤真菌群落最主要的因素。研究结果表明,导致硒砂瓜连作障碍的主要原因不是土壤理化性质变化,而是土壤真菌群落结构的改变。研究结果可为硒砂瓜土传病害的生物防治提供参考依据。     

Successional changes in soil,litter and macroinvertebrate parameters following selective logging in a Mexican Cloud Forest

The environmental and vegetation shifts associated with logging disturbance and secondary succession in Tropical Montane Cloud Forests have been studied in detail, however little is known about the consequences that these changes have for the soil system. The present study was undertaken to determine the impact of selective logging and subsequent secondary succession on soil microenvironmental conditions, leaf litter quality and quantity, soil nutrient concentration and soil and litter macroinvertebrate community composition. The study was carried out in three successional chronosequences, two recently logged sites and two pristine tropical mountain cloud forest sites in Oaxaca, Mexico. Results showed that selective harvesting of Quercus spp. trees caused an increase in soil temperature of ca. 4 °C that is not completely reversed after 100 years of succession. During 100 years of secondary succession litter diversity increased and soil organic matter accumulated (16.4% increase in total C). The availability of cations (Ca, Mg, Na, and K) in the topsoil decreased by more than 50% as a result of logging, and only Mg increased again between 75 and 100 years after disturbance.Pristine cloud forests sustain a diverse litter and soil macroinvertebrate community, but its composition and diversity was negatively affected by logging. The effect of Quercus harvesting activities on the litter community was apparent within 2 months of disturbance (total abundance declined by ca. 65%, higher taxa richness by ca. 10% and diversity by ca. 35%). For the soil community there was a time-lag in the effect of logging. Two months after disturbance there was no significant effect on the soil community but 15 years after abandonment, total macroinvertebrate abundance in the soil was ca. 80% lower and higher taxa richness ca. 30% lower compared to undisturbed sites. Full recovery of the macroinvertebrate community composition appeared to take more than 100 years both in the litter and soil. Reduced abundances of Coleoptera and Enchytraeidae were apparent even after 100 years of succession. The endemic earthworm Ramiellona wilsoni was found almost exclusively in the pristine forests and therefore its abundance could be used as a sensitive indicator of disturbance in these forests.     

棉秆生物质炭添加对棉田土壤理化性质及根际微生物群落结构的影响

以新疆滴灌棉田为研究对象,研究生物质炭施用对棉田土壤理化性质和棉花根际土壤微生物群落特征的影响。试验采集了不施生物质炭(CK)、施生物质炭3 t/hm²(BC1)、施生物质炭6 t/hm²(BC2)和施生物质炭9 t/hm²(BC3)4种处理棉花根际土壤,分析土壤理化性质和根际土壤微生物群落结构和组成的变化。结果表明,生物质炭施用后土壤pH和电导率分别下降了5.58% ~ 9.18%和5.38% ~ 18.04%;与CK相比,生物质炭施用使土壤有机质、全氮、全磷、碱解氮和有效磷含量均显著增加,且BC3增加效果最好,但生物质炭施用导致土壤钾含量显著降低。生物质炭施用显著降低了浮霉菌门(Planctomycetota)、芽单胞菌门(Gemmatimonadota)、厚壁菌门(Firmicutes)和被孢霉门(Mortierellomycota)相对丰度,但增加了子囊菌门(Ascomycota)、斯克尔曼氏菌属(Skermanella)、苔藓杆菌属(Bryobacter)、毛壳菌属(Chaetomium)、头束霉菌属(Cephalotrichum)、金孢属(Chrysosporium)和拟棘壳孢属(Pyrenochaetopsis)的相对丰度。另外,生物质炭施用降低了根际土壤微生物多样性和细菌丰富度,但根际土壤真菌的丰富度提高。生物质炭施用显著影响根际土壤微生物特别是真菌的群落结构,电导率、速效钾和pH是根际土壤微生物群落的主要影响因子。研究表明,生物质炭施用可以改善棉田土壤理化性质进而影响根际土壤微生物群落组成和结构,9 t/hm²为本试验的推荐施用量。     

Modelling the Fate of Chromated Copper Arsenate in a sandy Soil

Afforestation of former agricultural land changes soil characteristics such as pH and organic matter content, which may affect heavy metal solubility in the soil. In this study the effects of different tree species on heavy metal solubility were investigated at four 34 years old adjacent stands of beech (Fagus sylvatica L.), grand fir (Abies grandis Lindl.), Norway spruce (Picea abies (L.) Karst.) and oak (Quercus robur L.) planted on former agricultural land at four different sites in Denmark. The sites differ in soil characteristics and represent two texture classes (loamy sand and sandy loam). Soil pH and soil organic matter content was measured in the 16 stands and soil solution was isolated by centrifugation from three depths at four different occasions. Dissolved organic carbon (DOC), pH in the soil solution and the soil solution concentrations (availability) of Cd, Cu, Ni, Pb and Zn were determined. Analysis of variance showed that the tree species affects soil pH and organic matter content in the topsoil, but not in the lower horizons. Norway spruce and grand fir acidify more than beech and oak, and the highest amount of accumulated soil organic matter is in the topsoil under Norway spruce. The effects of tree species on soil solution pH and DOC resemble the effect on soil pH and organic matter content. Grand fir enhances the solubility of Cd and Zn in the topsoil with the lower solubility found under beech and oak and Norway spruce enhances the solubility of Cu, Ni and Pb in the top horizons. The lowest solubility of Ni and Pb is found under beech and oak, whereas the lowest Cu concentrations in the soil solution are found under grand fir. After 34 years of afforestation no effects of tree species on the concentrations of heavy metals in the soil solution from the C-horizons were found. The tree species effect on the concentration of Cd, Cu and Ni in the soil solution depends on the soil characteristics with the higher concentrations found in sandy loam soils, whereas no effect of site on the solution concentration was found for Pb and Zn. It was not possible to find a clear correlation between the soil solution concentrations of heavy metals, pH and DOC concentration.     

长期施肥对农田土壤真菌的影响

不合理施肥所引发的土壤环境问题逐渐成为制约我国农业可持续发展的重要因素之一,而土壤真菌作为一类重要的土壤微生物,研究施肥措施对真菌群落的影响对促进农业生产具有重要意义。本研究以有20年历史的长期定位试验田为研究对象,利用末端限制性片段长度多态性分析技术,对长期定位施肥农田生态系统中不同施肥方式对土壤真菌群落的影响以及时间变化规律进行了系统研究。长期施肥定位试验包括EM堆肥(EM)、传统堆肥(OF)、化肥(CF)和不施肥(CK)处理。主要研究结果如下:在0~20 cm土层,施肥处理对土壤真菌多样性有显著影响,Shannon-Weiner多样性指数为2.64~3.53,Simpson集中性指数为0.03~0.08;EM和OF处理的Shannon-Weiner多样性指数均显著高于CF和CK;在3月、6月和10月,EM和OF处理与CF和CK处理相比,有较高的真菌多样性;Simpson集中性指数最高的是3月的CK处理,最低的是10月的EM和OF处理。冗余分析结果表明,土壤pH、有机质、总氮、有效磷和有效钾等对真菌影响显著。因此,长期施用有机肥与化肥相比可以提高土壤真菌多样性,改变其群落结构;与化肥处理相比,施用EM堆肥,不仅可以保持土壤可持续利用性,同时改善0~20 cm土层土壤真菌的生存环境;3种施肥处理对土壤真菌群落结构影响程度由强到弱:EMOFCF。     

Forest floor development and biochemical properties in reconstructed boreal forest soils

Following resource extraction by surface mining in the oil sands region of northeastern Alberta, sites are reclaimed by reconstructing soils using a variety of salvaged organic and mineral materials, and planted to native tree species. This study assessed the influence of three distinct stand types (Populus tremuloides Michx., Pinus banksiana Lamb., and Picea glauca (Moench) Voss) on forest floor development (thickness, morphology, total carbon and nitrogen contents), soil organic matter composition, and associated soil microbial communities. Forest floor and top mineral soil (0–5 cm) samples were collected from 32 sites reclaimed 16–33 years ago. Soil organic matter composition was measured using ramped-cross-polarization ¹³C nuclear magnetic resonance, and microbial communities were characterized using phospholipid fatty acid analysis. Morphological characteristics indicated little mesofaunal or fungal activities within the forest floors. Stands dominated by P. tremuloides fostered more rapid forest floor development than the coniferous (P. banksiana and P. glauca) stands, and showed a significant increase in forest floor thickness with time since reclamation. Within the P. tremuloides stands, forest floor development was accompanied by temporal changes in soil organic matter composition that reflected inputs from the canopy. Soil microbial community composition differed among reclamation treatments of the reconstructed soils, specifically as a function of their subsoil mineral textures, when canopy cover was below 30%. Above 30%, significant differences became apparent among stand types. Taken together, our results document how canopy cover and stand type were both important factors for the reestablishment of plant–soil relationships at these sites. Furthermore, achieving a canopy cover of 30% emerged as a critical threshold point during soil reclamation.     

Effects of ecological restoration on microbial activity,microbial functional diversity,and soil organic matter in mixed-oak forests of southern Ohio,USA

As a result of many decades of fire suppression and atmospheric deposition the deciduous forests of eastern North America have changed significantly in stem density, basal area, tree size-frequency distribution, and community structure. Consequently, soil organic matter quality and quantity, nutrient availability, and microbial activity have likely been altered. This study evaluated the effects of four alternative forest ecosystem restoration strategies on soil microbial activity, microbial functional diversity, soil organic C, and soil N status in two mixed-oak (Quercus spp.) forests in southern Ohio, USA. The soils of these forests were sampled during the fourth growing season after application of (1) prescribed fire, (2) thinning of the understory and midstory to pre-settlement characteristics, (3) the combination of fire and thinning, and (4) an untreated control. Prescribed fire, with or without thinning, resulted in increased bacterial but not fungal activity when assessed using Biolog^®. In contrast, assays of acid phosphatase and phenol oxidase activity indicated greater microbial activity in the thinning treatment than in the other three treatments. Functional diversity of both bacteria and fungi was affected by restoration treatment, with the bacterial and fungal assemblages present in the thin + burn sites and the fungal assemblage present in the thinned sites differing significantly from those of the control and burned sites. Treatments did not result in significant differences in soil organic C content among experimental sites; however, the soil C:N ratio was significantly greater in thinned sites than in sites given the other three treatments. Similarly, there were no significant differences in dissolve inorganic N, dissolved organic N, or microbial biomass N among treatments. Bacterial and fungal functional diversity was altered significantly. Based on Biolog^® utilization treatments the bacterial assemblage in the thin-only treatment appeared to be relatively N-limited and the fungal assemblage relatively C-limited, whereas in the thin + burn treatment this was reversed. Although effects of restoration treatments on soil organic matter and overall microbial activity may not persist through the fourth post-treatment year, effects on microbial functional diversity are persistent.     

Do bacterial and fungal communities in soils of the Bolivian Altiplano change under shorter fallow periods?

Traditional fallow periods in the Bolivian highlands are being shortened in an effort to increase short-term crop yields, with potential long-term impacts on soil microbial communities and their functions. In addition, native vegetation, such as Parasthrephia sp. or Baccharis sp. (both locally known as ‘thola’) are often removed as a fuel for cooking. We evaluated the effects of fallow period and thola on soils in 29 farmers' fields in two municipalities in the Bolivian Altiplano (Umala and Ancoraimes). Soil fungal and bacterial community responses were characterized using 454-pyrosequencing. Soils in Ancoraimes had significantly higher levels of organic matter, nitrogen and other macronutrients compared to Umala. Ancoraimes soils also supported more diverse fungal communities, whereas Umala had more diverse bacterial communities. Unexpectedly, the longer fallow periods were associated with significantly lower fungal diversity in Umala and lower bacterial diversity in Ancoraimes. Fungi assigned to genera Bionectria, Didymella, and Alternaria, and bacteria assigned to genera Paenibacillus, Segetibacter, and Modestobacter decreased in frequency with longer fallow period. The presence of thola was not associated with significantly different overall soil fungal or bacterial diversity, but was associated with higher frequency of some genera, such as Fusarium and Bradyrhizobium. Our results indicate that fallow period has a range of effects on soil communities, and that the removal of thola may impact the dynamics of these communities.     

吉兰泰盐湖周边不同沙化程度植被群落与土壤养分特征研究

选取吉兰泰盐湖周边4种不同程度的沙化土壤,对其植被群落特征与土壤养分含量进行测定,分析不同沙化程度植被群落特征、土壤养分含量垂直分布特征以及植被群落与土壤养分含量之间的相关性。结果表明:(1)随着沙化程度的加剧,Shannon-Wiener多样性指数、Simpson优势度指数与Margalef丰富度指数均不断下降,植被群落结构趋于简单化;(2)随着沙化程度的加剧,土壤有机质与速效养分含量总体呈降低趋势;(3)土壤有机质、速效磷、速效钾均与Shannon-Wiener多样性指数呈显著正相关;碱解氮与Margalef丰富度指数呈显著正相关。对不同沙化程度植被群落特征和土壤养分的研究为吉兰泰盐湖区天然植被恢复与重建及盐湖保产、高产提供科学依据。     

Diversity of arbuscular mycorrhizal fungi in red tangerine (Citrus reticulata Blanco) rootstock rhizospheric soils from hillside citrus orchards

Root colonization, abundance of spores and hyphae, as well as species diversity of arbuscular mycorrhizal (AM) fungi were analyzed in citrus orchards along an altitudinal gradient. The citrus trees were heavily colonized (50.87–77.45%) by native AM fungi. In citrus orchards located at <600 m above sea level (asl), we recorded more extensive hyphal and arbuscular colonization, and higher spore and hyphal length density. AM fungal colonization, spore density, and hyphal length density were closely correlated with edaphic factors such as available phosphorus, pH, and organic matter. A total of 18 AM fungal species belonging to 3 different orders, Archaeosporales (1 species), Diversisporales (7 species) and Glomerales (10 species), were identified on the basis of spore morphological characteristics. In orchards located at higher altitudes (≥700 m asl), we observed a significant decrease in species richness and Shannon–Wiener index values. However, in all of the surveyed orchards, Glomus aggregatum, Funneliformis mosseae and Rhizophagus intraradices were the dominant species. Isolate frequency and relative abundance of AM fungi exhibited clearly distinct distribution patterns among taxonomic families. Canonical correspondence analysis revealed that the AM fungal community structure was significantly influenced by environmental factors, especially altitude, pH, soil moisture, and available nitrogen. Our data indicated that environmental factors are important in determining AM fungal root colonization, propagule numbers, and species diversity in citrus orchards.     

The functional structure of ectomycorrhizal communities in an oak forest in central France witnesses ancient Gallo-Roman farming practices

The activities of nutrient-mobilising enzymes secreted by ectomycorrhizas of sessile oak (Quercus petraea) have been measured in 24 plots in a forested area in central France where many rural Gallo-Roman settlements (first to fifth centuries AD) have been discovered. Data have been related with tree growth and soil chemical properties. Although soil near the past settlements is still enriched in N and P, this does not always correspond to the higher productivity of oak trees. However, when this is the case, the ectomycorrhizal community displays higher chitinase, protease and phosphatase activities (involved in N and P mobilisation from soil organic matter). A few specialised ectomycorrhizal fungal species are responsible for this adaptation to the long-lasting modification of soil conditions.     

设施种植模式对土壤细菌多样性及群落结构的影响

为了研究有机和常规设施种植模式及轮作对土壤细菌多样性和群落结构的影响,本研究采用Illumina平台Hiseq 2500高通量测序技术,于2016年6月(作物处于收获期)对北京市顺义区不同设施种植模式(分别为有机设施种植模式和常规设施种植模式下的叶菜连作、茄果连作和叶茄轮作)下土壤细菌进行16S r RNA测序。测序质控后共获得17 278个操作分类单元(operational taxonomic units,OTUs),共计318 851条有效序列。比较不同种植模式和轮作下土壤细菌多样性、细菌群落结构组成、相对丰度及土壤理化性质与细菌群落多样性关系的差异性。结果表明:土壤微生物群落结构在有机和常规设施种植模式下差异明显,有机设施种植土壤细菌多样性高于常规设施种植;有机设施种植下轮作与连作土壤细菌群落结构表现出明显差异,而常规设施种植下,两者没有明显差异;有机种植模式下,轮作土壤细菌群落多样性高于连作土壤;设施种植土壤细菌群落主要属于鞘氨醇单胞菌属(Sphingomonas,5.05%)和芽孢杆菌属(Bacillus,4.84%),相对丰度大于0.5%的共有14个属。有机设施种植土壤含有较多促进植物生长、有机质分解的细菌,常规设施种植土壤中降解化学杀虫剂、防治土壤病害、促进硝化过程的细菌较多。RDA分析结果显示土壤细菌群落主要受全磷、速效磷、有机质的影响。Tumebacillus、Candidatus Solibacter和Acidothermus都是分解有机质、利用碳源的细菌属,与土壤有机质含量呈正相关关系。由此可见,设施条件下,有机和常规种植土壤微生物群落结构的差异性主要源于肥料使用、有害生物防治措施和管理方式的不同。有机设施种植模式下,轮作更有利于发挥其改良土壤营养循环和防治土壤病虫害的作用。上述结果为在微生物水平上研究设施条件下不同种植模式的土壤生态质量差异提供了参考。