SHORT COMMUNICATION: Effect of Salt Stress on Peruvian Germplasm of Chenopodium quinoa Willd.: A Promising Crop

Soil salinity is a major problem in today’s agriculture. Quinoa has become an important crop because it exhibits high levels of salinity tolerance. In addition, its seeds contain an excellent balance of carbohydrates, lipids, amino acids and proteins for human nutrition. The quinoa germplasm includes almost 2500 accessions, some of which have been tested under salt stress. Here, we report the effect of NaCl on the germination of 182 previously untested accessions. When seeds were irrigated with saline water at 30 dS m^?1 EC, the stress appeared to be too high: all accessions showed less than 60 % germination. In contrast, irrigation with 25 dS m^?1 EC saline water allowed over 60 % germination in 15 accessions. These latter accessions’ agricultural traits were then evaluated. The overall coefficients of variation indicated that quinoa genotype and salt treatment dramatically influence root dry mass per plant, but do not noticeably affect the length of the plant’s life cycle. Unexpectedly, salt treatment resulted in increased plant height, leaf dry mass and grain yield. Using Euclidean distance for the simultaneous selection of these five agricultural traits, accessions 100, 136, 127 and 105 proved to be the best performing genotypes under salt stress.     

Variation among Andean races of maize for cold tolerance during heterotrophic and early autotrophic growth

Cold in the initial growth stages is an important stressfactor for maize grown in regions with a temperate climate,particularly in case of early sowing. Sources of tolerancehave been identified in adapted genotypes, but promisinggenes for cold tolerance should also be found in materialdeveloped under the lower-temperature margins of the cropdistribution. This research was conducted in order to testAndean maize accessions for cold tolerance expressed duringboth the heterotrophic and early autotrophic growth stages.Experiments were conducted in controlled environments tostudy cold tolerance traits (germination %, germinationindex and plant growth rate) at continuous 10^°C (heterotrophic growth) and at varying 10–16^°C (autotrophic growth). An experiment was also performed inthe field with early sowing (both heterotrophic and autotrophic growth). In each experiment, a control trialwas conducted in more favourable conditions (i.e. continuous25^°C in a controlled environment or late planting inthe field) so that cold tolerance traits could also beexamined as the ratio between the stress and the controltrial. None of the accessions was superior for all coldtolerance traits. However, several Andean maize accessionsoutperformed the US Corn-belt hybrid checks for one or moretraits, both in heterotrophic and autotrophic growth. Overall, BOZM 855, PMS 636, Poblacion D, Poblacion E andBOZM 696 were the best accessions, suggesting that they canbe a promising source of genes for improving cold toleranceof adapted maize genotypes.     

Biplot analysis of trait relations of white lupin in Spain

A 2-year study of autumn-sown white lupin (Lupinus albus L.) was conducted under rainfed Mediterranean conditions in southern Spain. 108 landraces were evaluated for yield and major phonological and plant structural characteristics. Path coefficient and Genotype-Trait (GT) biplot analysis were used. Applying both types of analyses to the multiple trait data revealed that GT biplot graphically displayed the interrelationships among traits and facilitated visual comparison of accessions and selection. Wide variation was observed for trait phenology (dates of flowering and maturity), plant structure (plant and first order inflorescence height) and yield characters (first order branches, first order inflorescence and total yield). It was found that the accessions with the highest yields were the tallest and the latest to flower, both on the mainstem and on the lowest first order branch, and also were the latest to mature. GT biplots also had suggested as the accessions have been displayed according to their origins. The results showed that foreign germplasm may be an important material for improving some yield components such as number of pods and seeds per plant of locally adapted lupins in Spain. This revised version was published online in July 2006 with corrections to the Cover Date.     

Germplasm diversity and estimate of genetic advance of four morpho-physiological traits in a world collection of jute

Summary To improve jute productivity, locating of sources of suitable quantitative-trait genes in the recently acquired world jute collection was needed. Two hundred sixteen accessions of Corchorus capsularis and 192 accessions of C. olitorius were evaluated at a jute seed research station (87°60\s'E, 23°80\s'N) for four yield and quality linked morpho-physiological traits. The objectives were to estimate the germplasm diversity, phenotypic (PCV) and genetic (GCV) coefficients of variation, broad sense heritability (h²) and genetic advance (GA) with respect to origins and traits. Irrespective of origins all the traits showed more than 60–80% diversity in both species. Trait means of diversity were significant but not the origin means. Generally, only slightly higher PCV values than GCV were obtained for all the traits in both the species. High h² values ranging from 50% to more than 98% were also found. All the traits can be simultaneously utilized for genetic gain. Most of the C. olitorius accessions with two times higher GA estimates than those of the C. capsularis are likely to be more successful for that matter. Maximum genetic gain is expected from Mutants > China > Brazil > India > Thailand > Nepal > Burma in C. capsularis while from Thailand > Tanzania > Mutants > Kenya > Other countries in C. olitorius. C. capsularis mutants with high heterogenity for most of the traits should be useful for finding many rare alleles.     

Stability of cassava plants at the DNA level after retrieval from 10 years of in vitro storage

Summary Cassava (Manihot esculenta Crantz) germplasm collections are conventionally maintained by continuous vegetative propagation in the field. Tissue culture techniques provide a more convenient way to conserve germplasm. The cassava in vitro gene bank held in trust at CIAT comprises nearly 6000 accessions. A study was carried out to determine whether any DNA rearrangements resulting from in vitro storage under slow growth could be detected by molecular analysis in retrieved plants. RFLPs with homologous probes, RAPDs with twenty primers and DNA fingerprinting with M13 probe were tested to detect variation at DNA level in cassava plants after ten-years in vitro storage. The molecular marker data obtained in this study supports the stability of the cassava germplasm under the in vitro storage conditions described in this work.     

Molecular characterization of genetic diversity in European germplasm of perennial ryegrass

Summary Perennial ryegrass (Lolium perenne L.) is the most important grass species for temperate grassland agriculture. The level and distribution of genetic variation in gene bank ecotype collections is still largely unknown but of great interest for the planning of breeding programs. The objectives of this study were to (i) assess the molecular diversity of Polish ecotypes of perennial ryegrass, and (ii) compare the relationship between this group and German ecotypes and European cultivars investigated previously. A total number of 166 polymorphic marker bands were detected among the 171 individual plants of the 9 Polish ecotypes. In a joint analysis with 9 Polish and 22 German ecotypes, and 22 European cultivars 172 polymorphic RAPD markers could be found. Genetic distance among the Polish ecotypes ranged from 0.31 to 0.51, while for all 53 populations a broader range was detected (0.25–0.67). An analysis of molecular variance (AMOVA) revealed a much larger variation within populations (71%) than among them (29%). The Polish ecotypes contained the highest within population variation (74%). The largest among group difference (15%) was found between the Polish ecotypes versus all other accessions. We conclude that the Polish ecotypes represent a valuable genetic resource for enlarging the genetic variation in the West European germplasm pool of perennial ryegrass.     

Influence of high temperature on the performance of some Phaseolus species at different developmental stages

Summary The effect of short term high temperature exposure on the performance of five Phaseolus species and of long term (continuous) exposure on the performance of P. vulgaris was studied at three growth stages. Phaseolus species subjected to 26.7, 32.2 or 37.3°C for two days showed small differences in the number of pods produced and in visual leaf damage, but large differences in leaf heat killing time, as measured by conductivity. P. coccineus had the shortest heat killing time (20–60 minutes) and P. acutifolius and P. lunatus the longest times (180 and 153 minutes), respectively. The P. vulgaris genotypes were intermediate in killing times to P. acutifolius and P. coccineus. Species response was not consistent with temperature within developmental stage. On average, the number of pods decreased as temperature increased from 32.2 to 37.3°C. Heat killing time and leaf damage also increased with temperature. CO₂ exchange rates of plants grown at prolonged high temperatures (30–40°C/20–30°C, day/night) decreased with the age of the plant. Shoot lenght was decreased as high temperature. P. vulgaris genotypes differed on the basis of either short term exposure or of continuous exposure. These results suggest that there may be useful germplasm in Phaseolus for improving heat tolerance.Scientific Journal Series Paper Number 13,8000 of the Minnesota Agricultural Experiment Station, USA.     

Genetic variation and phylogenetic relationships based on RAPD analysis in section Caulorrhizae, genus Arachis (Leguminosae)

Wild Arachis germplasm includes potential forage species, such as the rhizomatous Arachis glabrata and the stoloniferous A. pinto and A. repens. Commercial cultivars of A. pintoi have already been released in Australia and in several Latin American countries, and most of these cultivars were derived from a single accession of A. pintoi (GK 12787). Arachis repens is less productive as a forage plant than is A. pintoi. However, it can be crossed with A. pintoi, and thus has good potential as germplasm for the improvement of A. pintoi. Arachis repens is also used as an ornamental plant and ground cover. Many new accessions of these two stoloniferous species are now available, and they harbor significant genetic variability beyond that available in the few older accessions, previously available. Therefore, these new accessions need to be conserved, documented and considered in terms of their potential for crop improvement and direct commercial use. Sixty-four accessions of this new germplasm were analyzed using RAPD analysis. Most of the accessions of A. repens grouped together into a clearly distinct group. In general, the accessions from the distinct valleys of the Jequitinhonha, São Francisco and Paranã rivers did not group together, suggesting there is not a tight relation between dispersion by rivers and the geographic distribution of genetic variation in these species.     

早熟禾种质资源形态多样性及主成分分析

旨在利用形态学指标探讨早熟禾(Poa L.)种质资源遗传多样性,为早熟禾品种改良和选择亲本提供科学依据。研究了不同地理来源的34份早熟禾种质资源的14项形态指标,利用主成分分析和聚类方法,了解其形态多样性。结果表明:不同早熟禾种质的植物形态学特征存在广泛变异,其中以茎秆节数最大,小花数和叶长变异次之,而返青—成熟期生长天数为1.86%,变异最小;主成分分析结果显示叶长、叶宽、草层高、生殖高4个性状是造成早熟禾种质表型差异的主要因素;以14个形态性状为基础的聚类分析将所研究的34份种质材料分为3类,第一类与第三类差别明显。     

Patterns of RFLP-based genetic diversity in germplasm pools of common wheat with different geographical or breeding program origins

A set of 292 accessions of common wheat (Triticum aestivum L.) representing 21 germplasm pools based on geographical or breeding program origins was assayed for RFLP diversity. Thirty cDNA and genomic DNA probes and the HindIII restriction enzyme were employed for RFLP analysis. About 61% of all 233 scored bands were present in 75% or more of the accessions. All but one of the 30 probes revealed polymorphism, and the average number of distinct patterns per probe over all accessions was 9.5.Polymorphic Information Content (PIC) values within a pool varied from 0 to 0.9 and depended on the identities of both the germplasm pool and the probe. Rare banding patterns with a relative frequency of ≤0.2 within a pool were detected. These rare patterns were more likely to occur in pools exhibiting high levels of heterogeneity. The highest level of polymorphism was observed in the Turkish landraces from Southwest Asia. The Eastern U.S. soft red winter wheat germplasm pool was more genetically diverse than the other advanced germplasm pools, and nearly as diverse as the Turkish landrace pool. RFLP-based genetic relationships between germplasm pools generally tracked expectations based on common geographical origin, breeding history and/or shared parentages. The Chinese wheat landraces from Sichuan, Tibet, and Yunnan provinces were distinct from other pools. Similarity matrices for among-pool genetic distance estimates based on either band frequencies or banding pattern frequencies showed good correlation with matrices derived from Nei and Li's mean genetic similarity estimates (r=−0.82^** and r=−0.73^**, respectively. This revised version was published online in July 2006 with corrections to the Cover Date.     

Breeding transgressive lines of pepper for resistance to Phytophthora capsici in a recurrent selection system

Summary In order to increase the resistance level of pepper (Capsicum annuum) to Phytophthora capsici the main sources of genetic resistance were intercrossed. The parents included 7 varieties from different origins of partial resistance to P. capsici and to other soilborne pathogens. Two cycles of recurrent selection were performed by 7 plant breeders who screened the plants at two developmental stages with various isolates and at two temperatures. Analysis of data revealed a strong influence of the testing conditions on the evaluation of the plants. The level of resistance of the progenies further depended on the pathogen isolate used to screen the plants. Improvement of the whole population was more significant during the first cycle and lines with enhanced level of resistance as compared to the parents i.e. transgressive lines were fixed from the two cycles. These lines were resistant to much higher inoculum concentrations than the original parents and the expression of resistance was stable at high temperature (32°C). These new sources of polygenic resistance were included into a new breeding program to improve the agronomic characters.     

Genetic diversity of Brassica napus L. Germplasm from China and Europe assessed by some agronomically important characters

Summary The genetic diversity and relationships among 63 rapeseed accessions, including 34 Chinese, 22 Czech, 2 Swedish, 2 German, one French and 2 Canadian accessions, were evaluated by nine agronomically important characters in the field at Yangling, Shaanxi, China. Significant differences between Chinese and European group in plant height, setting position of the first primary branch, number of siliques of the terminal raceme, thousand seed weight and seed yield per plant were detected. There were significant variations in nine agronomic characters among the tested rapeseed accessions. Ward’s minimum variance cluster analysis based on Mahalanobis distances on the raw data of nine agronomic characters clearly separated the European accessions from the Chinese ones. However, the Chinese accessions with erucic acid free and/or low glucosinolates could not be separated from those Chinese accessions with both high erucic acid and glucosinolates. In general, cluster analysis of the 63 accessions based on the selected agronomic characters was consistent with known pedigree information and geographic origin, as well as the previous RAPD results of these accessions. The European rapeseed could be important germplasm resources for enriching the genetic background of Chinese rapeseed, and vice versa.     

Artificial neural networks as a tool for plant identification: a case study on Vietnamese tea accessions

Seventeen tea accessions belonging to Chinese (Camellia sinensis), Assamic (C. sinensis var. assamica), and Shan tea (C. sinensis var. pubilimba) groups, which are either commercially planted or new promising tea germplasm, were morphologically described at Phu Tho province (Viet Nam) and assessed for their diversity. Fourteen phyllometric parameters were qualitatively and quantitatively investigated using digital image analysis. The accessions were then discriminated by a dedicated artificial neural network for univocal plant identification and a hierarchical cluster analysis was performed in order to build a dendrogram reporting the relationships among them. Results proved the diversity of investigated tea morphotypes from Phu Tho province based on a morphological screening. More, the artificial neural network was able to perform a correct identification for almost all the accessions using simple dedicated instruments.     

An efficient method to produce segregating populations in quinoa (Chenopodium quinoa)

Quinoa offers a promising alternative for staple food, considering its outstanding nutritional value and tolerance to abiotic stresses. To develop breeding programmes in quinoa, a reliable crossing method for increasing the genetic variation is required. In the following study, we aimed to develop segregating populations in quinoa. We tested the efficiency of three different crossing methods (hand emasculation, warm water emasculation and no emasculation). Moreover we developed a two-stage selection strategy based on morphological traits and molecular markers for the selection of hybrid plants. We reported hand emasculation to be the most efficient crossing method, followed by warm water emasculation and no emasculation. Our results demonstrated that crosses in quinoa can be successfully performed, despite its complicated flower structure and high self-pollination rate. Additionally, we developed 30 segregating populations from crosses between accessions of different origins with varying phylogenetic relationship, which offers a promising perspective for quinoa breeding programmes in the future.     

Genetic variation of a safflower germplasm collection grown as a winter crop in southern Spain

Summary A germplasm collection containing 23 accessions of safflower (Carthamus tinctorius L.) was sown in 1993/94 as a winter crop in southern Spain to perform a comparative evaluation. Morphological, physiological and chemical characters were evaluated. Considerable diversity was found in the group. Only one Mexican accession was dwarf (40 cm tall). Most accessions were spiny but there were two spineless Iranian accessions and others with few spines. Variations were also evident for head and seed size. Seed yield per plant varied from 2.5 to 103.5 g and it was correlated with the number of heads, number of branches and plant height. Cultivars with oil content over 35% were identified. Most accessions were of the high linoleic type but there were two with high or intermediate levels of oleic acid, corresponding to the cultivars Ole and Oleic leed. Sowing in November in southern Spain has produced a long growing period (180–240 days) but earliness is common in Indian accessions. A Chinese phenotype with a prolonged rosette stage could be better adapted for cold tolerance. Red flowered spineless cultivars were present in the collection and will be preferred for ornamental or dye purposes.     

Analysis of bulked and redundant accessions of Brassica germplasm using assignment tests of microsatellite markers

This study was conducted to determine if Brassica germplasm bulks created and maintained by the USDA-ARS North Central Plant Introduction Station (NCRPIS) were made with genetically indistinguishable component accessions and to examine newly identified putative duplicate accessions to determine if they can be bulked. Using ten microsatellite primer pairs, we genotyped two bulks of B. rapa L. ssp. dichotoma (Roxb.) Hanelt comprising four accessions and three bulks of B. rapa L. ssp. trilocularis (Roxb.) Hanelt comprising fourteen accessions, as well as four pairs of putatively duplicate accessions of B.␣napus L. Assignment tests on ten individual plants per accession were conducted using a model-based clustering method to arrive at probabilities of likelihood of accession assignment. The assignment tests indicated that one of the two bulks of B. rapa ssp. dichotoma involves genetically heterogeneous accessions. It was observed in the B. rapa ssp. trilocularis bulks that the component accessions could be differentiated into groups, with misassignments observed most frequent within groups. In B. napus, only one of the four pairs of putative duplicates showed significant genetic differentiation. The other three pairs of putative duplicates lack differences and support the creation of bulks. The results of the assignment tests were in agreement with cluster analyses and tests of population differentiation. Implications of these results in terms of germplasm management include the maintenance and/or re-creation of some Brassica germplasm bulks by excluding those accessions identified as being unique in this study.     

Associations of some characters with seed yield in chickpea collections

Summary Three thousand two hundred and sixty-seven kabuli chickpea (Cicer arietinum L.) germplasm accessions were grown during the spring season of 1980 at Tel Hadya, the main research station of ICARDA, Syria to determine the components of seed yield. Observations were recorded on seed yield and 14 other characters. Correlation and path coefficient analyses were done to find out associations among characters and to assess the direct and indirect contribution of each character to seed yield.Large variation was observed for all the characters studied except days to flowering, days to maturity and protein content. Correlation and path coefficient analyses showed that biological yield and harvest index were the major direct contributors to seed yield. The 100-seed weight, plant height, days to flowering and maturity, canopy width, and protein content contributed to seed yield mainly through indirect effect via biological yield and harvest index. The 100-seed weight and seed yield were major contributors to biological yield. Major contributor to protein content was days to maturity. Results indicated that selection for high biological yield and harvest index would lead to high seed yield; and selection for large seed size would lead to high biological yield. Therefore, these characters should receive the highest priority in selecting high yielding plants in chickpea breeding.