多重PCR技术对沙门菌毒力因子检测

为了检验多重PCR技术在沙门菌毒力鉴定中的临床应用效果,评价沙门菌在陕西关中地区的流行情况,从该地区多家养殖场分离获得19株细菌,分别利用生化试验与小鼠攻毒试验和多重PCR技术鉴定和检验了沙门菌及其毒力。结果表明,多重PCR技术对分离沙门菌的鉴定结果和生化试验鉴定结果一致,符合率达100%;毒力质粒携带情况与小鼠攻毒结果一致;同时鉴定出陕西省多家养殖场中存在携带毒力基因菌株,值得关注其对畜禽养殖的潜在威胁。多重PCR技术能够快速、简便、灵敏度高和特异性强的鉴定沙门菌,并可鉴定出其毒力,可以用于致病性沙门菌的流行病学检测,值得在兽医临床和畜产品沙门菌污染的检测中推广应用。     

副猪嗜血杆菌毒力菌株和猪支气管败血波氏杆菌毒力菌株双重PCR检测方法的建立及应用

为建立一种能同时检测副猪嗜血杆菌(Hps)毒力菌株和猪支气管败血波氏杆菌(Bb)毒力菌株快速、准确的诊断方法,依据毒力血清型Hps OMP P2和Bb DNT基因序列分别设计合成引物,通过优化反应条件,成功建立了同时检测Hps毒力菌株和Bb毒力菌株的双重PCR方法。本试验建立的双重PCR法特异性强,重复性好,最低可检测核酸质量浓度分别达到1.79×10-3 g/L及8.3×10-3 g/L。使用该方法对来自四川地区部分猪场的36份猪呼吸综合征(PRDC)病料进行检测,结果检出率分别是33.33%和5.56%,与单一PCR结果一致,但高于细菌分离鉴定的准确率。试验结果表明该方法具有临床实用性,为四川地区Hps和Bb的诊断和预防奠定基础。     

6株副猪嗜血杆菌基因组DNA的PCR指纹图谱研究

根据肠道菌基因闻重复一致序列，设计了一对特异性引物，采用ERIC-PCR和RAPD技术，研究了副猪嗜血杆菌6个分离菌株的指纹图谱和DNA多态性。结果表明，6个分离株的PCR指纹图谱与15个标准血清型指纹图谱相比较可分辨出4种血清型；6个分离株的RAPD研究结果均表现出多态性。有意义的是，6个菌株的多态性DNA片段也能明显将其分为4种类型的副猪嗜血杆菌，与特异性引物PCR结果相一致。该研究可作为流行病学调查和该菌的分子分型快速诊断方法的基础。     

Virulence-associated trimeric autotransporters of Haemophilus parasuis are antigenic proteins expressed in vivo

Glässer’s disease is a re-emerging swine disease characterized by a severe septicaemia. Vaccination has been widely used to control the disease, although there is a lack of extended cross-protection. Trimeric autotransporters, a family of surface exposed proteins implicated in host-pathogen interactions, are good vaccine candidates. Members of this family have been described in Haemophilus parasuis and designated as virulence-associated trimeric autotransporters (VtaA). In this work, we produced 15 recombinant VtaA passenger domains and looked for the presence of antibodies directed against them in immune sera by immunoblotting. After infection with a subclinical dose of H. parasuis Nagasaki, an IgG mediated antibody response against 6 (VtaA1, 5, 6, 8, 9 and 10) of the 13 VtaA of the Nagasaki strain was detected, indicating that they are expressed in vivo. IgA production against VtaA was detected in only one animal. VtaA were more likely to be late antigens when compared to early (Omp P5 and Omp P6) and late (YaeT) defined antigens. Antibody cross-reaction with two orthologs of Nagasaki’s VtaA5 and 6, VtaA15 and 16 of strain HP1319, was also detected. No antibodies against VtaA were detected in the sera of animals immunized with a bacterin of the Nagasaki strain, suggesting poor expression in the in vitro conditions used. Taken together, these results indicate that VtaA are good candidate immunogens that could be used to improve H. parasuis vaccines. However, their capacity to confer protective immunity needs to be further studied.     

猪胸膜肺炎放线杆菌、多杀性巴氏杆菌和副猪嗜血杆菌复合PCR检测方法的建立

目的建立可以同时检测猪胸膜肺炎放线杆菌、多杀性巴氏杆菌和副猪嗜血杆菌的快速而可靠的PCR检测方法。方法和结果根据胸膜肺炎放线杆菌的Apx-VIA基因序列、多杀性巴氏杆菌和副猪嗜血杆菌的16SrRNA基因序列设计5条引物。猪胸膜肺炎放线杆菌、多杀性巴氏杆菌和副猪嗜血杆菌模板的PCR扩增产物大小分别为342bp,485bp和1258bp。复合PCR对1～12型猪胸膜肺炎放线杆菌标准株,6株多杀性巴氏杆菌标准株,1～15型副猪嗜血杆菌以及25株经生化鉴定确认为上述三种细菌的分离株的基因组DNA作为模板进行检测,均获得预期大小的扩增产物。以猪放线杆菌、吲哚放线杆菌等14种常见细菌作为阴性对照进行PCR检测,结果仅有支气管败血波氏杆菌产生了可以和上述三个特异性条带明显区分的PCR产物。复合PCR针对胸膜肺炎放线杆菌、多杀性巴氏杆菌和副猪嗜血杆菌的敏感性分别为14pg、34pg和37pg。结论本研究建立的复合PCR特异性好,敏感性高,可以用于猪胸膜肺炎放线杆菌、多杀性巴氏杆菌和副猪嗜血杆菌的快速检测。     

副猪嗜血杆菌、多杀性巴氏杆菌和胸膜肺炎放线杆菌多重PCR检测方法的建立及应用

在已建立的副猪嗜血杆菌(HPS)、多杀性巴氏杆菌(Pm)、胸膜肺炎放线杆菌(APP)的单重PCR检测方法的基础上,通过对扩增条件的优化,利用一次PCR反应可同时扩增出APP的256 bp、Pm的457 bp、HPS的822 bp的特异性片段,建立了HPS、Pm、APP的多重PCR实验室诊断方法。该复合PCR可检测60 pg的HPS、120 pg的Pm、50 pg的APP。利用该方法检测猪繁殖与呼吸综合征病毒(PRRSV)阳性猪体内分离到的39株细菌,结果显示HPS、Pm、APP分别为12、16、2株,对39份病料的检测与常规细菌分离鉴定结果一致,可见该方法适用于HPS、APP、Pm的临床快速检测。     

猪链球菌的鉴定及其主要毒力基因的多重PCR检测

通过革兰氏染色镜检、生化试验及PCR鉴定,对分离的猪源链球菌进行初步研究.同时根据猪链球菌主要毒力因子基因Sly、MRP、EF的核苷酸序列,设计并合成了3对特异性引物,通过体系和条件优化,建立多重PCR检测方法,对实验菌株及阴性对照菌株进行检测分析.结果从不同地区分离到的30株猪源链球菌中,确认16株为猪链球菌.多重PCR检测结果显示,Sly检出率为5/16,MRP检出率为4/16,EF检出率为2/16,阴性对照菌株毒力因子检测结果均为阴性.分析结果表明,该多重PCR体系可用于猪链球菌毒力相关因子Sly、MRP、EF的基因检测,特异性和敏感性较好.     

副猪嗜血杆菌PCR诊断试剂盒的研制及初步应用

在特异性和敏感性试验的基础上,组装副猪嗜血杆菌PCR诊断试剂盒,进行批间和批内试剂盒的检测、试剂盒在不同温度条件下的保存期试验等.结果表明,试剂盒特异性好、敏感性高,批内和批间的试剂盒无差异,试剂盒在-20℃可保存30个月,4℃可保存12个月.适用于不同地区、不同条件的实验室快速检测副猪嗜血杆菌.     

副猪嗜血杆菌的分离与鉴定

从福建省龙岩市l例临床症状、病理剖检变化疑似副猪嗜血杆菌病的患病猪的关节液中分离到1株革兰氏染色阴性可疑菌株,经卫星现象、生化鉴定等实验室诊断,进一步以副猪嗜血杆菌的16S rRNA基因设计特异性引物进行PCR鉴定,确定该分离菌为副猪嗜血杆菌。药敏试验结果表明,分离株对环丙沙星、卡那霉素、强力霉素、氨苄西林、阿米卡星、庆大霉素药物敏感;对泰妙菌素、诺氟沙星有抵抗力。     

2012～2014年江西地区副猪嗜血杆菌分离株ERIC-PCR指纹图谱分析

在对15种副猪嗜血杆菌血清型参考株鉴定获得15种不同ERIC-PCR指纹的基础上,对2012~2014年分离自江西地区41株副猪嗜血杆菌临床分离菌株进行指纹鉴定。结果表明,41株副猪嗜血杆菌产生20种不同的指纹图谱,相同血清型的菌株表现出不同的指纹图谱,无法进行血清分型的副猪嗜血杆菌应用该方法可得到充分区分。该方法证实副猪嗜血杆菌ERIC-PCR指纹图谱存在丰富的多样性,可适用于副猪嗜血杆菌的快速基因分型及分子流行病学调查。     

副猪嗜血杆菌的分离鉴定

副猪嗜血杆菌(Hps)为猪呼吸道疾病综合征(PRDC)的重要病原之一。在对广西65个猪场281份病猪组织样品进行PRDC病原学调查的基础上,对PCR检测的Hps阳性样品进行了细菌分离,并进行了生化特性、药敏试验、16 S RNA基因片段序列分析和基因组DNA的PCR指纹图谱分析。结果显示,11份(3.91%)检测样品为Hps阳性,且均为混合感染;从南宁市四塘、桂林市永福、玉林市容县和钦州市浦北分离出5株Hps,分离菌株的生化鉴定结果均符合Hps生化特性,且对头孢噻呋和头孢菌素高度敏感;其中3株为血清5型,1株为血清12型,另1株未能定型;分离菌株16 S RNA基因片段之间及与GenBank其他一些代表菌株的核苷酸同源性在99%以上。     

副猪嗜血杆菌PCR检测方法的建立与初步应用

根据副猪嗜血杆菌16 S rRNA基因设计了一对引物,通过最佳条件摸索扩增出大小为821 bp的特异目的基因片段,建立了快速检测副猪嗜血杆茵的PCR方法,该方法最低检出量达10-3 ng,且对大肠埃希茵、金黄色葡萄球菌、传染性胸膜肺炎放线杆菌和巴氏杆茵等均无交叉反应.用该PCR方法从门诊送检的病料中检测出4株副猪嗜血杆菌,并对分离株SH0854P的PCR扩增产物进行测序与对比分析,其与已发表的GenBank中的相关菌株的同源性为97.3%～100%.     

副猪嗜血杆菌PCR检测方法的建立与应用

为了快速检测临床上副猪嗜血杆菌(Haemophilus parasuis,Hps)感染,根据Gen Bank中Hps的16S rRNA基因保守区序列,设计1对特异性引物,利用PCR方法检测Hps,并进行特异性、敏感性及临床检测。结果显示:PCR反应选择58℃为最适退火温度,0.5μL(20μmol/L)为最适引物量,模板浓度为7.2×10~(-6)μg/mL时即可扩增出814 bp特异性目的片段,与细菌分离结果一致。结果表明:该方法敏感、快速、特异,可用于临床上Hps感染的快速检测。     

Development of a PCR test to diagnose Haemophilus parasuis infections.

A polymerase chain reaction (PCR) test was developed in order to improve the accuracy and speed of diagnosis of Haemophilus parasuis, an economically important respiratory pathogen that affects swine. The gene sequence of the 16S small subunit ribosomal RNA of H. parasuis (GenBank M75065) was compared with 56 16S sequences of related bacteria, including those frequently isolated from pig tissues. Two species-specific primers were designed: HPS forward and HPS reverse. The predicted size of the amplified PCR product was 821 bp. The PCR test could detect a minimum of 102 bacteria and 0.69 pg of DNA. Thirty-one H. parasuis isolates, including 12 different serovars and 19 field isolates, were positive using the PCR test. No amplification was observed when the test was run using DNA from 15 other bacterial species commonly isolated from swine tissues. A weak band was observed when the PCR test was performed using Actinobacillus indolicus DNA as template. Clinical samples tested by PCR included tissues and swabs from 5 animals naturally infected with H. parasuis and 1 experimentally infected animal. The PCR was positive in 26 of 30 clinical samples. Four samples showed weak bands, and these results were not considered positive. Haemophilus parasuis was isolated from 18 of 30 of these samples. Tissues from specific pathogen-free (SPF) pigs and from unrelated species were negative for H. parasuis isolation and PCR. The developed PCR was successfully used in the diagnosis of H. parasuis infection, especially when compared with traditional microbiology techniques.     

副猪嗜血杆菌及巴氏杆菌双重荧光定量PCR检测方法的建立

为建立副猪嗜血杆菌(Hps)、多杀性巴氏杆菌(Pm)的双重荧光定量PCR检测方法,本研究基于Hps的Omp P2基因,Pm的PlpE基因设计两对特异性引物及探针,通过对反应条件优化,建立了一种同时检测Hps及Pm的双重荧光定量PCR方法。该方法能够特异性地检测Hps和Pm,其对重组质粒标准品的最低检测浓度分别为5.60×10^2拷贝/μL、7.58×10^2拷贝/μL。双重与单一荧光定量PCR最低检测限相同,且均是常规PCR的100倍。重复性试验结果显示,该方法的组内和组间变异系数均小于2.5%。临床应用结果显示:该方法对阳性样品的检出率为53.57%,明显优于常规PCR和细菌分离鉴定。该方法能够用于两种疾病的同时检测和快速排查疾病。为两种疾病的防治提供有效检测工具。     

Development of an improved species specific PCR test for detection of Haemophilus parasuis

A PCR test for identification of Haemophilus parasuis was optimized using the 16S rDNA sequences of the 15 serotype reference strains of H. parasuis. The test was evaluated on a collection of 218 Danish field isolates as well as on 81 representatives of 27 other species, including genetically affiliated species within Pasteurellaceae. In addition, DNA preparations from 56 H. parasuis isolates from North America were included. To obtain a test that was specific for H. parasuis, a multiplex PCR using 3 different primers was developed. The PCR test produced an amplicon of approximately 1090 bp only with representatives of H. parasuis. The test was further evaluated on 55 clinical samples from 16 Danish pigs suspected for being infected with H. parasuis, showing polyserositis or septicemia at autopsy as well as on 492 nasal swabs. The test was compared with the performance of a PCR test earlier published by Oliveira et al. [Oliveira, S., Galina, L., Pijoan, C., 2001. Development of a PCR test to diagnose Haemophilus parasuis infections. J. Vet. Diagn. Invest. 13, 495-501]. The sensitivity of the present PCR test was found to be slightly lower when applied on clinical samples from diseased pigs and 10-fold lower when tested on pure cultures of H. parasuis (5CFU and 0.5CFU/PCR reaction, respectively). Addition of 1.4 x 10(5) Escherichia coli to each PCR tube did not alter the sensitivity of the tests. No difference in sensitivity of the tests was observed when tested on purified DNA. On the other hand, the present PCR test was found to be 100% species specific for H. parasuis, in contrast to the PCR test of Oliveira et al., which also tested positive for strains belonging to A. indolicus, A. porcinus, and A. minor, species commonly occurring in the upper respiratory tract. However, when the PCR test of Oliveira et al. is used on samples from systemic locations the chances for false positive results are apparently low. The present PCR test represents a rapid and reliable method for genetically based identification of H. parasuis. The high species specificity of the test makes it suitable for detection of H. parasuis in clinical samples, regardless of the presence of affiliated species and contaminating flora. As the two PCR tests differ in sensitivity and specificity, the use of both PCR tests for different purposes is a possibility.     

副猪嗜血杆菌Shandong2007株的分离与鉴定

对1例临床症状、病理剖检变化疑似副猪嗜血杆菌病的仔猪病料进行实验室诊断,进行了细菌形态观察、培养特性和生化特性等鉴定,根据副猪嗜血杆菌的16 S rRNA基因设计特异性引物进行PCR扩增,将822 bp片段连入T-载体后测序,再通过GenBank进行比对分析.生化试验结果为接触酶阳性,氧化酶和H2S阴性;生长需要NAD,发酵果糖、半乳糖和蔗糖等,不分解D-甘露醇和D-山梨醇.药敏试验显示,对氨苄青霉素、丁胺卡那霉素等药物敏感.PCR鉴定结果与国外副猪嗜血杆菌菌株16 S rRNA序列的同源性为99%以上,初步鉴定该分离菌株为副猪嗜血杆菌(Haemophilus parasuis,Hps).     

副猪嗜血杆菌荧光定量PCR方法的建立及初步应用

为建立一种快速、敏感、特异的副猪嗜血杆菌(Haemophilus parasuis,HPS)荧光定量PCR(Fluorescence Quantitative PCR,FQ-PCR)检测方法,根据Gen Bank登录的HPS 16S rRNA基因序列,设计1对特异性引物和1条特异性Taq Man-MGB探针,建立了HPS荧光定量PCR检测方法,并对方法的敏感性、特异性以及重复性和稳定性进行了验证。结果显示:本研究建立的HPS FQ-PCR方法在10~1~10~6拷贝/μL模板范围内有很好的线性关系,所得相关系数为0.998;检测灵敏度可达10拷贝/μL,是常规PCR的10倍;特异性好,对pGEM-T/HPS重组质粒扩增呈现阳性反应曲线,而对4个对照病原的扩增曲线均呈现阴性反应;对不同浓度的pGEM-T/HPS重组质粒分别重复扩增3次,重复结果良好。对30份临床疑似HPS感染的组织样品进行应用检测,检出19份阳性,比商品化的HPS FQ-PCR检测试剂盒及常规PCR方法的阳性检出率高。结果表明,本研究建立的HPS FQ-PCR方法具有敏感性高、特异性好、稳定性强的优点,可用于临床HPS感染猪的早期检测,对HPS的快速诊断、综合防控具有重要意义。     

致犊牛腹泻肠毒素大肠杆菌多重PCR检测方法的建立

肠毒素大肠杆菌((Ent erot oxi geni c E.col i,ETEC)是引起犊牛腹泻的主要病原之一。本试验建立了多重PCR检测ETEC毒力因子F41菌毛、K99菌毛和STa、LT肠毒素相关基因的技术方法。试验对影响PCR扩增的dNTP、引物浓度以及退火温度等因素进行优化,确定了多重PCR的特异性和灵敏性。结果表明:所建立的多重PCR方法快速、特异、灵敏,在2.5h-3h内就可以完成,为致犊牛腹泻肠毒素大肠杆菌的快速准确检测提供另一种选择。