Genetics of seed coat colour in lentil

Summary Four grey mottled seed coat colour lentil lines/cultivars were crossed to one brown seed coat colour cultivar. The F₁ hybrids were brown seeded in all the crosses. Segregation pattern for seed coat colour in F₂ and F₃ generations revealed that it is under control of a single dominant gene, which is present in the parent UPL 175 while a recessive gene is responsible for grey mottled seed coat colour in Pant L 406, Pant L 639, LG 120 and Rau 101.     

Genetic analysis and linkage study of seed weight in lentil

Summary The genetics of seed weight was studied in crosses between the cultivated lentil L. culinaris and the wild species L. orientalis and L. ervoides. Seed weight was found to be under polygenic control with additive and dominant gene action and with partial dominance of low seed weight alleles. High heretability estimates were obtained in the analysed crosses. Nuclear-cytoplasmic interaction was found to affect seed weight in crosses involving accession No.138 of L. orientalis. Factors affecting seed weight were linked to morphological and DNA markers distributed over several linkage groups. High seed weight in segregating generations were usually associated with alleles of marker loci originated from the cultivated parent. Factors enhancing seed weight were detected in accession No.138 of L. orientalis, indicating the potential of wild genetic resources for seed weight improvement in lentil.     

Response to conventional and organic environment of thirty-six lentil (<Emphasis Type="Italic">Lens culinaris</Emphasis> Medik.) varieties

Thirty-six lentil varieties were evaluated under organic and conventional environment for three consecutive years in order to see whether the promising genetic material for an organic plant breeding program are different from those of a conventional system. The genetic material studied originated from various countries. In the conventional trial plots standard cultural practices (P mineral fertilization & pest control) were applied throughout the growing season, while in the organic ones no fertilizers or pest agrochemicals were applied. Significant regression, but of low value, between grain yield ranking and earliness or harvest index ranking was detected. Combined ANOVA indicated significant differences between genotypes, years, environments and genotype × environmental interactions (GEI). It was observed that under conventional management most of the genotypes had a higher yield compared to the organic one. The mean grain yield ranking of the genotypes in each of the environments revealed that some of the genotypes occupied the same ranking position at both the organic and the conventional environment (non-crossover GEI), while others exhibited a significant alteration in their ranking (crossover GEI) under the two environments. Crossover GEI and non-cross over GEI revealed two types of lentil varieties. Varieties with specific adaptation and varieties with broad adaptation. It was concluded that grain yield was in general higher when lentil varieties were grown under a conventional environment compared to the grain yield produced under an organic environment. Yet, there are lentil genotypes with a higher yielding ability under the organic management and therefore should be targeted by the breeder.     

Association of isozyme markers with quantitative trait loci in random single seed descent derived lines of lentil (Lens culinaris Medik.)

Summary Polymorphism at isozyme loci was used to locate factors responsible for variation in quantitative traits of lentil. Eight sets of random single seed descent (RSSD) derived lines were developed by advancing individual F₃ plants of interspecific (L. culinaris Medik. × L. orientalis Boiss.) hybrids to the F₆. The RSSD lines in each of the eight sets differed for alleles at 2–8 isozyme loci. In each set, association of isozyme loci with variation in seven quantitative traits (days to flower, days to mature, plant height, biomass, seed yield, harvest index, seed weight) was determined for each pairwise combination of a quantitative trait with a marker locus. Loci affecting variation in all seven quantitative traits were detected by their association with 14 isozyme markers (Aat-c, Aat-m, Aat-p, Adh-1, Fk, Gal-1, Gal-2, Lap-1, Lap-2, Pgd-p, Pgi, Pgm-c, Pgm-p, Skdh). The known position of 10 the 14 isozyme loci on the lentil genetic map was used to mark the genomic regions for possible location of associated quantitative trait loci (QTL). Detected QTL were found to be located in six of the seven linkage groups on lentil genetic map. Regions of the genome represented by linkage groups, 1, 5 and 7 appeared to affect a greater number of traits than other genomic regions represented by linkage groups 2, 3 and 4. Results indicated that the mean expression of quantitative traits at segregating marker locus classes can be used to locate the genetic factors in lentil which influence the behavior of economically important traits.     

Genetics of allozyme variants and linkage groups in lentil

Summary The genetics of 8 electrophoretically detectable enzymes in lentil was examined. The enzyme systems glutamic-oxaloacetic transaminase, malic enzyme, phosphoglucomutase, alcohol dehydrogenase, 6-phosphogluconate dehydrogenase, shikimic dehydrogenase and isocitrate dehydrogenase were assayed. The allozymes at each of the studied loci behaved in a codominant manner and segregated in the expected Mendelian fashion. Linkage tests between these loci and an additional morphological trait revealed two linkage groups that involved 5 loci, the rest were independent of each other.     

The origin of lentil and its wild genepool

Summary Following hybridization experiments and cytogenetic analysis of interspecific hybrids three chromosome interchanges were found between the cultivated lentil L. culinaris and L. nigricans, and only one between the cultivated species and L. orientalis. This indicates that the latter species is more likely to be wild progenitor of lentil. The partial fertility of the interspecific hybrids indicate further that both L. nigricans and L. orientalis should be included in the wild genepool of lentil, and their variation can be exploited by relatively simple hybridization techniques. The wild lentils L. orientalis and L. nigricans are morphologically very similar but reproductively strongly isolated from one another by the albino seedling of their hybrids. It has been suggested that the populations of L. orientalis that gave rise to the cultivated lentil still possess a similar chromosome arrangement as in L. culinaris and are also capable of forming normal hybrids with L. nigricans. According to these considerations it is unlikely that lentil originated from populations at the south western corner of the distribution area of L. orientalis.     

Inheritance of new genetic markers in lentil (Lens Miller)

Summary We report on the inheritance of 11 morphological markers and 17 isozymes in lentil (Lens culinaris). The monogenic inheritance of 11 morphological markers and 11 isozymes is confirmed. The inheritance of six isozymes (Aco-2, Enp, Est-3, Est-4, Lap-3, and Mdh-m) is reported for the first time in lentil. This brings the total number of described genes in lentil to 78. Cases of disturbed segregation were more frequent than expected by chance. It is suggested that disturbed segregation was in most cases caused by linkage with a piece of chromosome that showed preferential elimination in crosses between Lens culinaris ssp. odemensis and other subspecies. The prevalence of disturbed segregation in crosses with Lens culinaris ssp. odemensis could limit the usefulness of this subspecies in genetic and linkage studies.     

Inheritance of black testa colour in lentil (Lens culinaris Medik.)

The inheritance of testa (seed coat) colour and interaction of cotyledon and testa colours were studied in seven crosses of lentil (Lens culinaris Medik.) involving parents with black, brown, tan or green testa and with orange, yellow or dark green cotyledons. Analysis of F₂ and F₃ seed harvested from F₁ and F₂ plants, respectively, revealed that although black testa is dominant over nonblack testa, its penetrance is not complete since both F₁ plants and heterozygous F₂ plants produced varying proportions of seeds with either black or nonblack testa. The F₂ populations of the crosses between parents with brown and tan, as well as brown and green, testa segregated in the ratio of 3 brown : 1 tan and 3 brown : 1 green, respectively, indicating monogenic dominance of brown testa colour over tan or green. The expression of testa colour was influenced by cotyledon colour when parents with brown or green testa are crossed with those having orange or green cotyledons. Thus F₂ seeds from these crosses with a green testa always had green cotyledons and never orange cotyledons. F₂ seeds from these crosses with a brown testa always had orange cotyledons and never green cotyledons. These results suggest diffusion of a soluble pigment from the cotyledons to the testa. This revised version was published online in July 2006 with corrections to the Cover Date.     

Restoration of meiotic regularity and fertility among derivatives of Lens culinaris x L. Nigricans hybrids

Summary The wild lentil, L. nigricans is cross compatible with the cultivated species. Chromosome pairing in their F₁ hybrids is highly irregular due to a difference of three translocations between the parental species. However, the hybrids are partially fertile and in the F₂ populations there is a marked improvement in fertility. About 19% of the F₂ plants were meiotically stable, fully fertile and their chromosome arrangement was similar to that of the cultivated species. All these are clear indications for the possibility of rapid introgression between the two species and hence systematic screening of L. nigricans for traits of economic value is fully justifiable.     

Genetic variance of six agronomic characters in three lentil (Lens culinaris Medic) crosses

Summary Three lentil (Lens culinaris Medic) crosses (cross 1 = Chilean × PI 297784; cross 2 = Tekoa × PI 212611; cross 3 = Precoz × PI 212611) were advanced in a hierarchal design from the F₂ generation to the F₅ generation and tested in replicated field experiments. The purpose was to estimate the genotypic variances and covariances for several characters and to partition these into components due to additive, dominance, and additive × additive variances.Additive genetic variance was the major component of variance in cross 2 for all characters, except plant height and seed weight. Unexpectedly, estimates of dominance variance appeared to be high in crosses 1 and 3. Estimates of the additive × additive component seemed very small in all three populations. The dominance variance component estimates were consistently high for plant height in the three crosses and for seed weight in crosses 2 and 3. Where parental means were close, additive variance estimates were often low and in many cases negative. The unexpected high ratio of dominance variance to additive variance indicated that dominance variance was important in the crosses we studied.Cooperative investigations of Agricultural Research Service, US Department of Agriculture and the College of Agriculture, Washington State University, Pullman, Washington 99164, Work sponsored by Fellowship from Univ. of Jordan, Amman, Jordan. Scientific paper no. 5825.Formerly: Department of Agronomy and Soils, Washington State University, Pullman, WA., USA. Presently: Department of Plant Production and Plant Protection, University of Jordan, Amman, Jordan.Statistical Services, Washington State University, Pullman, WA 99164, USA.US Department of Agriculture, Agricultural Research Service, Washington State University, Pullman WA 99164, USA.     

Inheritance of seed coat colour in broad bean (Vicia faba L.)

Summary The inheritance of the seed coat colours violet, spotted, brown, green, red, black and beige was investigated in a 10×10 diallel cross between broad bean (Vicia faba L. major) lines. Spotted seed colour was dominant over any uniform seed coat colouring. Brown was dominant over black, green and normal (beige colour). Black and red seed parents behaved as recessive in all F₁ progenies. A 3 (coloured): 1 (normal) segregation ratio was observed in the F₂ of crosses of violet, brown, black, red and spotted seed coat parents to nornal seed coloured parents. Green x beige gave a segregation ratio of 9:7 in F₂. When two parents with different seed coat colour were involved in a cross, the F₂ showed a typical digenic segregation ratio thus demonstrating two unlinked and sometimes epistatic loci.Segregation of a multiallelic series at two loci explains all segregation ratios observed for seed coat colour in broad bean.     

Harvest index in lentil (Lens culinaris Medik.)

Summary Correlation and path coefficient analyses were conducted to find out the characters associated with grain yield and dry matter production and the ways to improve harvest index in lentil.Correlation studies revealed positive association of harvest index with grain yield but no association with plant dry matter. Grain yield and plant dry matter showed positive correlation with pod number, plant height, and number of primary and secondary branches but negative correlation with 100-seed weight. Generally, the genotypic correlations were in agreement with phenotypic correlations, though the magnitude of the values was higher in the former case. In path analysis, plant height and pod number showed the highest direct effect and, therefore, seem to be the main characters influencing grain yield and plant dry matter. Number of primary and secondary branches, on the other hand, showed negative direct effect on grain yield and plant dry matter. Use of phenotypic or genotypic correlations in path analysis resulted in similar conclusions. It is, therefore, suggested that either phenotypic or genotypic correlations may be used in path analysis with equal efficiency. Based on this study it is suggested to develop tall varieties with good pod bearing but with low number of branches.     

Suppressive mechanism of seed coat pigmentation in yellow soybean

In soybean seeds, numerous variations in colors and pigmentation patterns exist, most of which are observed in the seed coat. Patterns of seed coat pigmentation are determined by four alleles (I, iⁱ, i^k and i) of the classically defined I locus, which controls the spatial distribution of anthocyanins and proanthocyanidins in the seed coat. Most commercial soybean cultivars produce yellow seeds with yellow cotyledons and nonpigmented seed coats, which are important traits of high-quality seeds. Plants carrying the I or iⁱ allele show complete inhibition of pigmentation in the seed coat or pigmentation only in the hilum, respectively, resulting in a yellow seed phenotype. Classical genetic analyses of the I locus were performed in the 1920s and 1930s but, until recently, the molecular mechanism by which the I locus regulated seed coat pigmentation remained unclear. In this review, we provide an overview of the molecular suppressive mechanism of seed coat pigmentation in yellow soybean, with the main focus on the effect of the I allele. In addition, we discuss seed coat pigmentation phenomena in yellow soybean and their relationship to inhibition of I allele action.     

Micropropagation of intra and interspecific Lens hybrids

An intraspecific (Tetir × ILL 323) and an interspecific (Alpo × L. odemensis) lentil hybrid were multiplied in vitro in three consecutive micropropagation cycles to increase the production of F₂ seeds. Cloning efficiencies were slightly higher for Tetir × ILL323 (83%) compared to Alpo × L. odemensis (67%). A total of 982 F₂ seeds were produced in the experiment with Alpo × L. odemensis, consisting of the 334 F₂ seeds of the original hybrid and 648 F₂ seeds produced by the 12 plants cloned; consequently, F₂ seed production was increased three-fold over the original hybrid (194%). A total of 6050 F₂ seeds were produced in the experiment with Tetir × ILL 323, made up of the 483 F₂ seeds of the original hybrid and 5567 F₂ seeds produced by the 15 plants cloned; therefore, F₂ seed production was increased by more than twelve-fold over the original hybrid (1153%). In both hybrids the F₂ seed production of cloned plants diminished in the three consecutive multiplication cycles, with the plants having experienced less vegetative development. In lentil, F₂ seed production of cloned plants is related for the first time to the length of their period of vegetative development. In conclusion, micropropagation of hybrids is an interesting tool to construct from a single individual large F₁ populations that enable to increase by a manifold the production of F₂ seeds useful for genetic studies and breeding.     

Predicting transgressive segregants in early generation using single seed descent method-derived <Emphasis Type="Italic">micro-macrosperma</Emphasis> genepool of lentil (<Emphasis Type="Italic">Lens culinaris</Emphasis> Medikus)

In a self-fertilised crop like lentil, the identification of transgressive segregants for economically important trait such as seed yield is an important aspect of any practical breeding programme. The prediction of expected transgressive segregants in F₁ generation obtained as a ratio of additive genic effect [d] and additive variance (D) i.e. [d]/√D was studied in 28 crosses of lentil generated in a diallel fashion involving four parents each of macrosperma (exotic) and microsperma (Indian) types, respectively, resulting in three hybridization groups. The seed material advanced to F₂, F₃ and F₄ generations through single seed descent method was evaluated to determine the observed transgressive segregants for seed yield/plant. The observed frequency of crosses showing more than 20% transgressive segregants in F₂ to F₄ generations were exhibited in 9(32%) crosses, of which 7(77%) crosses were of macrosperma × microsperma type. Genotypes Precoz and HPL-5 of the exotic group (macrosperma) produced maximum number of transgressive segregants with the genotypes L-259, L-4145 and PL-406 of the Indian origin (microsperma). Goodness of fit (non-significant χ² value) in F₂ generation was observed for 19(68%) crosses of the total genepool, out of which 9(56%) crosses each in F₃ and F₄ generation belonged to the macrosperma × microsperma group, depicting it as the gene pool of paramount importance to obtain maximum transgressive segregants, therefore establishing the efficacy of the method used.     

Temperature effects on seed germination and expression of seed dormancy in wheat

Because preharvest sprouting decreases quantity and quality of wheat grain, researchers need effective protocols to assess response to preharvest sprouting conditions. The aim of this study was to determine which temperature gives the greatest difference in seed germination and expression of seed dormancy in 10 spring wheat genotypes. The genotypes were grown in the field near Swift Current, Saskatchewan in 2000 in a randomized complete block with four replicates. Seed samples were harvested at approximately 25% moisture content (wet weight basis) and dried to 12% moisture content with minimal after-ripening. Germination was under controlled environment at temperatures of 10, 15, 20 and 30 °C in darkness. A weighted germination index (WGI) was calculated. The analysis of WGI, for each temperature, showed highly significant (p ≤ 0.01) genotype effects on germination. Most genotypes decreased in WGI (increased dormancy) as temperature was increased from 10 to 30 °C. The greatest differences in seed germination tended to be at 15 °C and 20 °C. The level of seed dormancy depended on the genotype and germination temperature. This revised version was published online in August 2006 with corrections to the Cover Date.     

Discovery of a new gene causing dark green cotyledons and pathway of pigment synthesis in lentil (Lens culinaris Medik)

A new gene is reported which functions as a master gene for synthesis of the pigments determining cotyledon colour in lentil. This gene is different from the two earlier reported genes which are responsible for synthesis of yellow (gene Y) and brown (gene B) pigments. Double recessive homozygous condition of these two genes results into loss of both pigments and, consequently, produces light green cotyledons. The new gene, in contrast, produces dark green cotyledons in recessive condition irrespective of the dominance or recessive state of the Y and B genes. It is hypothesized that the new gene for dark green cotyledon colour (Dg) acts at an earlier stage in the biosynthesis of the two cotyledon-specific pigments, which are derived from a common precursor, whose synthesis is blocked when Dg mutates to its recessive condition. This revised version was published online in August 2006 with corrections to the Cover Date.     

Using molecular markers to pyramid genes for resistance to ascochyta blight and anthracnose in lentil (Lens culinaris Medik)

Ascochyta blight caused by the fungus Ascochyta lentis Vassilievsky and anthracnose caused by Colletotrichum truncatum [(Schwein.) Andrus & W.D. Moore] are the most destructive diseases of lentil in Canada. The diseases reduce both seed yield and seed quality. Previous studies demonstrated that two genes, ral1 and AbR1, confer resistance toA. lentis and a major gene controls the resistance to 95B36 isolate of C. truncatum. Molecular markers linked to each gene have been identified. The current study was conducted to pyramid the two genes for resistance to ascochyta blight and the gene for resistance to anthracnose into lentil breeding lines. A population (F_6:7) consisting of 156 recombinant inbred lines (RILs) was developed from across between ‘CDC Robin’ and a breeding line ‘964a-46’. The RILs were screened for reaction to two isolates (A1 and 3D2) ofA. lentis and one isolate (95B36) ofC. truncatum. χ² analysis of disease reactions demonstrated that the observed segregation ratios of resistant versus susceptible fit the two gene model for resistance to ascochyta blight and a single gene model for resistance to anthracnose. Using markers linked to ral1 (UBC 227₁₂₉₀), to AbR1(RB18₆₈₀) and to the major gene for resistance to anthracnose (OPO6₁₂₅₀),respectively, we confirmed that 11 RILs retained all the three resistance genes. More than 82% of the lines that had either or both RB18₆₈₀ and UBC227₁₂₉₀markers were resistant to 3D2 isolate and had a mean disease score lower than 2.5. By contrast, 80% of the lines that had none of the RAPD markers were susceptible and had a mean disease score of 5.8. For the case of A1 isolate of A. lentis, more than 74% of the lines that carriedUBC227₁₂₉₀ were resistant, whereas more than 79% of the lines that do not have the marker were susceptible. The analysis of the RILs usingOPO6₁₂₅₀ marker demonstrated that 11out of 72 resistant lines carried the marker, whereas 66 out of 84 susceptible lines had the marker present. Therefore, selecting materials with both markers for resistance to ascochyta blight and a marker for resistance to anthracnose can clearly make progress toward resistance in the population. This revised version was published online in July 2006 with corrections to the Cover Date.     

Inheritance of resistance to Fusarium wilt in Indian lentil germplasm (Lens culinaris Medik.)

Summary Three lentil genotypes resistant to Fusarium oxysporum f.sp. lentis viz. Pant L 234, JL 446 and LP 286 were crossed with two susceptible ones. The hybrid plants were all resistant in the eight crosses evaluated. Segregation pattern for wilt reaction in F₂, BC(P₁), BC(P₂) and F₃ generations in field and glasshouse conditions indicated that resistance to Fusarium wilt is under the control of two dominant duplicate genes in Pant L 234 and two independent dominant genes with complementary effects in JL 446 and LP 286. A third dominant gene complementary to the dominant genes in JL 446 and LP 286 is present in two susceptible lines. Allelic tests suggest the presence of five independently segregating genes for resistance. Duplicate dominant genes in Pant L 234 are non-allelic to two dominant genes with complementary effects in LP 286 and JL 446 and the third gene complementary to the two genes in JL 446 and LP 286 in susceptible lines JL 641 and L 9–12. Gene symbols among parental genotypes have been designated.     

Relationships among economic characters in lentil

Summary There are several reports of the association among lentil characters based on a few, relatively similar lines grown in single environments. Their results have often been inconsistent because of inadequate sampling of genotypes and environments. This study examined associations between economic characters in lentil over a wide range of genetic material and environments in West Asia. The first part of the study concerned correlations within large samples from the world lentil collection grown in two seasons, and the second part covered a smaller sample of genetic material from the collection sown over a wider range of conditions.The results showed similar phenotypic correlations over two seasons, contrasting in rainfall, in the world lentil collection. Similar genetic and phenotypic correlations were also shown by the smaller sample of germplasm over 10 environments. These results indicated low importance of covariance due to environmental and genotype-environment interaction effects. Seed yield was positively correlated with straw yield, indicating selection for either character will increase the other trait. The correlation between seed protein content and seed yield was small and negative, while the correlation of protein with straw yield was positive in sign. This suggests that the current ICARDA goals of selection for high seed and straw yield will not have a major correlated effect on seed protein content. There was a strong positive correlation between seed size and cooking time (r=0.96), therefore seed size can be used to predict cooking time.