Lake-use by juvenile Atlantic salmon (Salmo salar L.) and other salmonids in northern Norway

Abstract– The utilization of lakes, and inlet and outlet streams by juvenile Atlantic salmon ( Salmo salar L.), brown trout ( Salmo trutta L.) and Arctic charr ( Salvelinus alpinus (L.), were investigated in 16 watercourses northern Norway, all known to inhabit salmon stocks. In lakes, fish were caught by small mesh size gill nets, while in rivers fish were caught electrofishing. In the shallow littoral (0-3 m depth) there were juvenile salmon in 15 of 19 investigated lakes, juvenile trout in 17 and juvenile charr in seven. Trout dominated significantly in numbers in the shallow littoral of seven lakes, while salmon and charr dominated in three lakes each. When trout and salmon were frequent in the shallow littoral, charr was usually not present in this habitat, but were found in the profundal zone in most of the lakes. Atlantic salmon parr utilized both shallow and deep lakes, and used both stones and macrophytic vegetation as shelter. The utilization of lakes by salmon parr seemed to be closely related to utilization of small inlet streams for spawning. In most inlet and outlet streams salmon dominated over trout in numbers, while charr were absent. This is the first documentation of lake-use by naturally occurring salmon parr in Scandinavia.     

Habitat utilization of juvenile Atlantic salmon (Salmo salar L.), brown trout (Salmo trutta L.) and Arctic charr (Salvelinus alpinus (L.)) in two lakes in northern Norway

Abstract— Habitat utilization of juvenile Atlantic salmon, brown trout and Arctic charr was investigated in two lakes in northern Norway during the icefree season. Both the vertical distribution and the distribution among different habitat types were studied by gillnetting with small mesh sized gillnets (8-15 mm) in different habitats. Salmon and trout were predominantly caught in the littoral and sublittoral zones (0-6 m depth). Access to shelter seemed to be the most important factor determining the horizontal distribution of small salmon and trout. Most of these fish were caught in stony or vegetated habitats, while few salmon and trout were caught on sandy locations or in the pelagic zone. In one of the lakes, there were significantly higher catch rates of salmon than of trout in the stony littoral (0-3 m), while in the other lake there were no significant differences in spatial distribution between these two species. Charr were primarily found in the profundal, sublittoral or pelagic zones of the lakes.     

Atlantic salmon, Salmo salar L., and sea trout, Salmo trutta L., passage in a regulated northern river – fishway efficiency, fish entrance and environmental factors

The number and the size of Atlantic salmon, Salmo salar L., using the Isohaara fishway was elevated by increasing the fishway discharge and by changing the type of the pass entrance. The fishway is intended to help fish bypass a hydroelectric station located close to the mouth of the large, regulated River Kemijoki, in northern Finland. Multi-sea-winter (MSW) salmon returned to the river mouth during peak flows in early June but did not use the fishway until 1 month later. Their number in the fishway was positively correlated with the tailwater level. One-sea winter (1-SW) salmon, which arrived approximately one month later, started to enter the fishway without corresponding delays. In autumn, a high tailwater level and a small drop at the fish entrance seemed to be needed for the successful passage of these small-sized salmon and sea trout, Salmo trutta L.     

Pike predation on hatchery-reared Atlantic salmon smolts in a northern Baltic river

Abstract –  The effect of pike Esox lucius predation on the mortality of newly stocked Atlantic salmon Salmo salar smolts was investigated in the Pyhäjoki River, Finland. The number of smolts eaten by pike was assessed by estimating the size of the pike population (mark–recapture experiment) and studying the stomach contents of pike. Before recapturing the pike, approximately 39,700 smolts were stocked upstream of the 2.5-km-long (89-ha) research area. The estimated size of the >40-cm pike population was 1507 (95% CL 1012–4731) individuals (17 pike and 29.8 kg·ha⁻¹). Pike were estimated to eat 29% of the released smolts during 1 week. The diet of the pike in the research area consisted almost entirely of smolts, whereas in the reference area with no stocked smolts, the meal sizes were significantly smaller and the importance of smolts as prey was substantially lower. Pike <40 cm had not eaten any smolts, probably indicating a size refuge for the smolts, or alternatively fear of intraspecific interactions or cannibalism of pike.     

Long-term changes in the smolt size and age of Atlantic salmon, Salmo salar L., in a northern Baltic river related to parr density, growth opportunity and postsmolt survival

Abstract –  The size of wild Atlantic salmon ( Salmo salar L.) smolts in 1972–2004 was studied in relation to parr density, smolt age, growth opportunity and postsmolt survival in the Simojoki River. There was a significant negative regression between the annual mean smolt size and the density of wild >1 year parr in the previous autumn, but not between the annual mean smolt size and age. The density of reared parr released into the river or the growth opportunity, based on the day length and air temperature during the previous summer, did not affect the size of wild smolts. The data on postsmolt survival based on recaptures of Carlin-tagged smolts showed a significant positive relationship ( P  < 0.01) between the survival of postsmolts and the annual size of wild smolts. It is hypothesised that the increased density of wild >1 year parr could have contributed to the decreased smolt size since the 1990s, and the reduced size of wild smolts could be included among the factors resulting in their declined postsmolt survival in the Baltic Sea.     

Relationships between juvenile salmon, Salmo salar L., and invertebrate densities in the River Tana, Norway

Abstract –  Juvenile salmon density was related to invertebrate density in 13 streams within the River Tana, northern Norway. There were only small, nonsignificant, differences in benthic density between streams with and without juvenile salmon. All streams with a high density of juvenile salmon had low benthic densities at the stream mouth. Juvenile salmon were not found, or were in very low densities, in streams where the benthic density at the stream mouth was as high or higher than that in the stream. A multiple regression model showed that parr density was related negatively to benthic density at the stream mouth, water velocity and pH, and positively to benthic density within the stream and the proportion of the substratum covered by moss. The amount of overhanging cover in the different streams explained 93% of the variation in the drift density of terrestrial invertebrates in August. The highest densities of juvenile salmon were found in streams with riparian vegetation, and were thus associated with an abundant supply of drift food, especially terrestrial invertebrates.     

Response of juvenile Atlantic salmon, Salmo salar, to the introduction of salmon carcasses in upland streams

Abstract  The role of nutrients in the production of Atlantic salmon, Salmo salar L., in oligotrophic upland catchments is poorly understood. Atlantic salmon carcasses were introduced to 12 upland streams in the River Conon catchment, Scotland, UK, to assess potential nutrient limitation and evaluate a potential role for migratory Atlantic salmon in nutrient import. The objective was to test the hypothesis that nutrient supplementation would increase juvenile Atlantic salmon biomass. Streams received one of six treatment levels up to a maximum of one carcass per 15 m² of wetted area with duplicates at each level, and study areas were sampled to measure salmon biomass in treated and reference reaches. There was a significant positive relationship between treatment addition level and response of juvenile salmon biomass. At higher carcass addition levels, salmon biomass in treatment sections was approximately twice that in paired reference sections. The results are discussed in the light of management methods in upland regions and the likely role of cultural oligotrophication in suppressing current levels of salmon production.     

Submerged light increases swimming depth and reduces fish density of Atlantic salmon Salmo salar L. in production cages

Artificial photoperiods that postpone sexual maturation and increase growth are now widely used in the Atlantic salmon Salmo salar L. farming industry. Few studies have been carried out to examine the effect of this treatment on fish behaviour and welfare in production cages. In this study, echo‐integration was used to observe the swimming depth and fish density of salmon in 20‐m‐deep production cages illuminated by lamps mounted above the water surface (SURF) or submerged in the cage (SUBS). From January to May, SUBS swam at a greater depth (5–11 m) than SURF (1–3 m) at night. SURF descended and SUBS ascended at dawn, but SUBS were still swimming at greater depth than SURF during the day from January to March. The difference in swimming depth resulted in SURF swimming at a median fish density about twice as high as SUBS at night and up to five times the calculated fish density. SURF increased the utilization of the cage volume as the biomass increased, but fish swimming at the highest density did so at up to 20 times the calculated fish density. The results suggest that salmon position themselves in relation to the artificial light gradient to maintain schooling behaviour and that the use of submersible lights may be a precaution to secure the welfare of caged salmon.     

The onset of downstream movement of juvenile Atlantic salmon, Salmo salar L., in a chalk stream

The downstream movements of wild Atlantic salmon, Salmo salar L., from their established feeding territories in the River Itchen, Hampshire, UK, were logged continuously over an 11-month period using a passive integrated transponder (PIT) antenna system. The time of these movements was then related to a number of monitored and calculated environmental parameters. Initial downstream movement of smolts in April was correlated with the onset of darkness, at which time salmon moved from their established feeding territories alone. No relationship was found between the number of smolts migrating and river flow or maximum daily water temperature. The timing of downstream movement of parr between October and March was random with regard to sunset and time of maximum daily water temperature, suggesting the environmental cue that initiates movement may be different outside the spring smolt period.     

Effect of fishing regulation on the occurrence of repeat spawners and age distribution of Atlantic salmon in a northern Baltic river

Abstract  Upstream migrating Atlantic salmon, Salmo salar L., were trapped annually between 1990 and 2003 at the mouth of the River Simojoki in the northern part of the Gulf of Bothnia, the Baltic Sea, to collect hatchery brood fish. They were also collected between 1996 and 1998 in the river to estimate the number of ascending salmon. These data on spawners were used to study the effect of changing fishing regulations in the Finnish coastal fishery in the mid-1990s on the structure of the spawning stock. In total, 1.9% of 2290 multi-sea-winter adults had previously spawned. The average annual proportion of repeat spawners was 0.5% between 1990 and 1996, but significantly higher (2.8%) between 1997 and 2003. The age distribution also changed significantly, as 4SW and 5SW salmon appeared in the population in the latter years. These changes were most probably due to the application of stricter fishing regulations. The potential of salmon to spawn repeatedly was thus preserved, despite a severe decline in natural production in the 1980s and early 1990s.     

Reproductive success of Atlantic salmon (Salmo salar) mature male parr in a small river,the Nivelle: influence of shelters

Grimardias D, Merchermek N, Manicki A, Garnier J, Gaudin P, Jarry M, Beall E. Reproductive success of Atlantic salmon (Salmo salar) mature male parr in a small river, the Nivelle: influence of shelters.
Ecology of Freshwater Fish 2010: 19: 510–519. © 2010 John Wiley & Sons A/S Abstract – The breeding activity of a small population of Atlantic salmon (Salmo salar L.) was monitored on the Nivelle River in southwest France to estimate the overall contribution of mature male parr and the numbers involved in egg fertilisation. In the twelve redds sampled, 563 eggs were collected for parental assignment and the physical habitat was characterised to investigate the possible relationship between parr reproductive success and habitat complexity. The overall contribution of mature male parr was particularly high (87%, one of the highest estimates ever reported). Concerning habitat complexity, granulometry and shelter diversity were correlated with the number of parr breeders contributing to egg fertilisation in each redd. A complex habitat increased multiple paternity, which could affect the effective size and genetic variability of small salmon populations.     

A comparison of catchment based salmonid habitat survey techniques in three river systems in Northern Ireland

Three survey techniques, a fully quantitative, multivariate study; a shorter or truncated fully quantitative method and a Geographical Information System (GIS) based, semi-quantitative, survey technique, were developed to assess in-river salmonid habitats on a catchment wide basis. These methods were tested and compared on three river systems in Northern Ireland: the Blackwater, the Bush and the Main. The research indicated that the fully quantitative method generated an accurate habitat database but required a high investment in time and resources to complete. The truncated survey approach often produced an inaccurate habitat database. The semi-quantitative technique generated a more accurate habitat dataset with greater productivity and efficiency for the resources invested in the survey.     

Effects of hook and release on Atlantic salmon in the River Alta, northern Norway

The purpose of the study was to collect information on angling procedures and the effects of hook and release on Atlantic salmon in the River Alta, northern Norway, covering both grilse and multi-sea-winter salmon in a non-artificial setting with real anglers. Information on the angling procedure, handling of the fish and the condition of the fish at release was collected for individual salmon in catch logs (n=543, mean body length 82 cm), whereas physiological stress was studied in a sub-sample (n=15, mean body length 77 cm). To study post-release behaviour, survival and recapture rates, salmon were tagged with radio transmitters (n=30, mean body length 83 cm) and anchor T-tags (n=353, mean body length 79 cm). To evaluate the effects of the hook and release programme on the salmon population, number of spawning redds were recorded from a helicopter in 6 years during 1989–2000.

The results showed that at water temperatures 10.0–14.5 °C, a high proportion of the radio tagged salmon (97%) survived hook and release and stayed in known spawning areas during the spawning period. However, the behaviour after release seemed to be affected by hook and release. Only a small proportion (4%) of the anchor T-tagged salmon was caught more than once within the same season. Increased playing time, increased number of runs during the angling event, hooking in the throat, bleeding at the hook wound, increased handling time, air exposure and water temperature were factors that affected hooked and released Atlantic salmon negatively, either indicated by a poor condition at release, increased stress levels or unnatural behaviour after release. Number of spawning redds were more than doubled after the introduction of compulsory release of all angled salmon in Sautso (the upper 16% of the watershed inhabited by salmon) in 1998, which indicates that hook and release can be an effective management tool to enhance declining Atlantic salmon populations.     

Entry of adult Atlantic salmon into a tributary of the Aberdeenshire Dee,Scotland

Upstream counts of adult salmon in a tributary to the River Dee during autumn and winter were examined over a 13‐year period using an optical fish counter. Statistical analysis indicated that salmon were mainly primed to enter the tributary at a particular time of year, peaking at early December. However, environmental factors also had a large influence. Entry of salmon was initiated by high flow rates in the main stem of the River Dee. Increases in water level in the tributary itself were not needed to stimulate the entry of salmon. Moreover, a change in flow from 1 day to the next did not result in a response from salmon. Rather, they reacted only after more than a day of flow increase. There was no consistent threshold level of flow that triggered tributary entry. The upstream passage of salmon was reduced at low temperatures (below 3°C). The numbers of salmon migrating upstream showed a gradual increase as the temperatures increased up to 11°C, and then sharply decreased at higher temperatures. Female salmon migrated earlier by about 2 weeks on average than males. Increasingly, counters and traps are being installed on spawning tributaries to examine the state of salmon stocks. Caution should be exercised, however, in using upstream entry data from individual tributaries to provide an overall assessment of salmon abundance, as local conditions in the tributaries may affect the salmon counts in particular years.     

A comparison of epidemiological patterns of salmon lice, Lepeophtheirus salmonis, infections on farmed Atlantic salmon, Salmo salar L., in Norway and Scotland

This paper examines two large national data sets collected over several years and contrasts the patterns of sea lice, Lepeophtheirus salmonis (Krøyer, 1837), infections, the use of treatments and the occurrence of chalimus peaks between Norwegian and Scottish farms. Infection levels in Scotland were significantly higher in general over the period under study. For the chalimus stage group in the first quarter of the year, Norwegian mean abundance stayed below 10 lice per m² while Scottish means reached 45 lice per m² of fish skin per m³ of water. Both countries had more chalimus in summer than at other times of year, but in the last 3 months of the year Scottish fish had, on average, two to four times as many chalimus as Norwegian fish. Peaks of chalimus abundance were more frequent in Scotland, particularly in winter, but the most prominent peaks occurred in summer in both countries. In Scotland a marked mid-year build-up of mobile pre-adult and adult stages was seen, and both countries showed a tendency for mobile counts on the second year fish to increase towards the end of the year. Scottish fish carried, on average, three times as many mobile lice per m² of skin as Norwegian fish in the last 3 months of the year. The difference in lice loads was reflected in the greater use of veterinary medicines on Scottish farms. The higher infection levels in Scotland may be due to shallower and more enclosed water bodies used for farming, smaller and shallower pens, differences in sea water temperatures or in access to appropriate medication. The results highlight the importance of ensuring that effective veterinary medicines are available in the UK for the control of infection.     

A Bayesian approach to estimating Atlantic salmon fry densities using a rapid sampling technique

Abstract  Removal sampling by electric fishing is widely used for assessing fish population size. As it is manpower consuming, less-demanding techniques have been proposed to increase the number of sites covered with the same human resources. These techniques essentially provide relative abundance measures. To be used for absolute abundance estimation, they need to be inter-calibrated with another method such as removal sampling. Here, hierarchical Bayesian modelling framework is used for this inter-calibration because it allows an estimate of absolute abundance from abundance index data alone while accounting for the main sources of uncertainty. It is applied to a 0+ juvenile Atlantic salmon, Salmo salar L. data set from 21 sites on the River Faughan, Northern Ireland. A positive relationship was found between the abundance index (number of fish caught in 5 min of actual electric fishing) and the density. The estimates from the index of abundance alone are fairly imprecise, but still allow differentiation of contrasting levels of fish density.     

Regional variability in Atlantic salmon (Salmo salar) riverscapes: a simple landscape ecology model explaining the large variability in size of salmon runs across Gaspé watersheds,Canada

Kim M, Lapointe M. Regional variability in Atlantic salmon (Salmo salar) riverscapes: a simple landscape ecology model explaining the large variability in size of salmon runs across Gaspé watersheds, Canada.
Ecology of Freshwater Fish 2011: 20: 144–156. © 2010 John Wiley & Sons A/S Abstract – Atlantic salmon (Salmo salar) rivers in the Gaspé Peninsula, Quebec, present a 20 to 1 variability in the average numbers of returning adult salmon per km² of watershed area (the ‘specific run size’). These variations are very poorly explained by interbasin differences in total stream length (R² = 0.033, P = 0.533) or in estimates of total area of salmon habitat that fail to take into account complementarity and interconnections across life stage habitats (R² = 0.065, P = 0.448). The relative spatial distribution of three complementary habitat types (adult holding pools, spawning beds, parr habitats) is hypothesised to be an important factor controlling the production of salmon at any given watershed area or given total stream length, and by extension the numbers of adults returning each year to spawn. We developed a simple riverine landscape ecology (or riverscape) model that uses easily accessible topographic map sources to identify optimally productive river segments. These segments were identified based on large‐scale river and valley features and the associated spatial organisation of complementary salmon habitats. We tested the ability of this model to predict salmon run sizes for 14 watersheds in the Gaspé Peninsula. The aggregate length of optimally productive segments, as defined in our model, is a strong predictor of the average size of the annual salmon runs for these watersheds (R² = 0.913, P < 0.0005). Furthermore, specific salmon run sizes were accurately predicted (R² = 0.771, P < 0.0005) after removal of the obvious scale effects of watershed size.     

A survey of salmon gill poxvirus (SGPV) in wild salmonids in Norway

In 2016, the Norwegian health monitoring programme for wild salmonids conducted a real‐time PCR‐based screening for salmon gill poxvirus (SGPV) in anadromous Arctic char (Salvelinus alpinus L.), anadromous and non‐anadromous Atlantic salmon (Salmo salar L.) and trout (Salmo trutta L.). SGPV was widely distributed in wild Atlantic salmon returning from marine migration. In addition, characteristic gill lesions, including apoptosis, were detected in this species. A low amount of SGPV DNA, as indicated by high Ct‐values, was detected in anadromous trout, but only in fish cohabiting with SGPV‐positive salmon. SGPV was not detected in trout and salmon from non‐anadromous water courses, and thus seems to be primarily linked to the marine environment. This could indicate that trout are not a natural host for the virus. SGPV was not detected in Arctic char but, due to a low sample size, these results are inconclusive. The use of freshwater from anadromous water sources may constitute a risk of introducing SGPV to aquaculture facilities. Moreover, SGPV‐infected Atlantic salmon farms will hold considerable potential for virus propagation and spillback to wild populations. This interaction should therefore be further investigated.     

Assessment of a catchmentwide salmon habitat rehabilitation scheme on a drained river system in Northern Ireland

A catchment‐scale salmon, Salmo salar L., habitat enhancement scheme was developed for the River Main (Northern Ireland) with reference to baseline habitat and electric fishing surveys. In total, 19 separate sites were enhanced using flow deflectors or random boulder addition. Habitat suitability for juvenile salmon increased at enhanced sites following the scheme, and significant changes in underlying physical habitat characteristics (particle size, depth and flow) were detected after the installation of flow deflectors. The overall index of salmon fry recruitment, monitored across the catchment, showed no change between pre‐ and post‐enhancement periods. The mean biomass of salmon evident at individual enhancement sites (5.1 g m^?2) was significantly higher than the mean biomass at control sites (1.2 g m^?2). Increased densities of >0+ juvenile salmon were associated with enhanced sites relative to controls. Marking studies indicated the potential for long‐range dispersal of juvenile salmon between 0+ (summer) and 1+ (summer) age classes. The potential of the scheme to enhance the local salmon stock was discussed.     

Upstream migration of Atlantic salmon at a power station on the River Nidelva, Southern Norway

The upstream migration of 17 radio-tagged adult Atlantic salmon, Salmo salar L., past hydroelectric developments on the River Nidelva, Southern Norway, was examined. Salmon migrated quickly from the site of release in the lower part of the river up to the tunnel outlet of Rygene power station, but were substantially delayed at the outlet. The salmon stayed in the outlet area for 0–71 days (median = 20), and mainly took up a position inside the dark power station tunnel. Water discharge in the tunnel was 57–176 m³ s⁻¹, while residual flow in the river between the outlet and the dam 2.5 km further upstream was 3 m³ s⁻¹. Ten salmon passed the outlet and entered the residual flow stretch, but none passed the dam. Six of the 10 salmon returned to the tunnel outlet. No major migration barriers were identified in the residual flow stretch, suggesting lack of motivation among the salmon to migrate due to either low water discharge compared with the main river, or several minor migration barriers along the river stretch.