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传染性法氏囊病病毒BC6/85株全基因组克隆及其序列分析
引用本文:于雷,李慧姣.传染性法氏囊病病毒BC6/85株全基因组克隆及其序列分析[J].中国兽药杂志,2013,47(12):17-21.
作者姓名:于雷  李慧姣
作者单位:中国兽医药品监察所,中国兽医药品监察所
摘    要:以传染性法氏囊病病毒(IBDV)BC6/85株基因组RNA为模板,采用RT—PCR方法扩增并克隆了IBDVBC6/85株基因组全长eDNA。序列测定结果表明:A节段全长共3260个核苷酸,与IM株的同源性最高为97.4%,与其他血清I型毒株的核苷酸同源性介于91.2%~97.1%;B节段有2827个核苷酸,与IM株同源性最高为98.6%,与其他毒株的核苷酸同源性为88.7%~98.6%。通过对编码的氨基酸序列进行分析,发现BC6/85株有21个特有氨基酸,其中15个位于多聚蛋白VP2—4—3。系统进化树分析表明,BC6/85株与经典毒株、弱毒株和变异株的关系较近,而与超强毒株相对较远。

关 键 词:传染性法氏囊病病毒  全基因组  序列分析
收稿时间:2013/6/28 0:00:00
修稿时间:2013/7/23 0:00:00

Sequence Analysis of the Complete Genome of IBDV BC6/85
Institution:China Institute of Veterinary Drug Control,
Abstract:The full-length of double segments of the infectious bursal disease virus (strain BC6/85) was amplified by RT-PCR and sequenced. The result showed that segment A contains 3260bp,compared with other IBDV strains,BC6/85 segment A shared 91.2%~97.4% homology at nucleotide level,segment B contains 2827bp,which shared 88.7%~98.6% homology. The analysis of deduced amino acid sequences indicated that IBDV BC6/85 strain has 21 specific residues. Phylogenetic tree analysis indicated BC6/85 is more closely related to the attenuated, classical and variant IBDV than those of very virulent IBDV strains.
Keywords:infectious bursal disease virus  complete genome  sequence analysis
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