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猪ADAR2基因全长cDNA克隆、序列特征及表达模式分析
引用本文:张跃博,王立刚,侯欣华,刘欣,颜华,张龙超,王立贤.猪ADAR2基因全长cDNA克隆、序列特征及表达模式分析[J].畜牧兽医学报,2021,52(3):620-629.
作者姓名:张跃博  王立刚  侯欣华  刘欣  颜华  张龙超  王立贤
作者单位:1. 中国农业科学院北京畜牧兽医研究所, 北京 100193;2. 湖南农业大学动物科学技术学院, 长沙 410128
基金项目:中国农业科学院科技创新工程(ASTIP-IAS02);国家生猪产业技术体系(CARS-36);湖南省教育厅科学研究项目(19C0902)。
摘    要:旨在克隆猪作用于RNA的腺苷脱氨酶2基因(ADAR2)全长cDNA序列,同时对该基因在猪不同组织中的表达规律进行探索。利用RACE (rapid-amplification of cDNA ends)对大白猪ADAR2基因mRNA全长序列进行克隆,并进行生物信息学分析;用荧光定量PCR方法检测35日龄大白猪心、肝、肺、肾、脾、脑、小肠、背最长肌和背部脂肪9种组织中ADAR2的表达水平。结果表明,猪ADAR2基因cDNA全长6 305 bp,共包含12个外显子,编码704个氨基酸,与人、黑猩猩、猕猴、长臂猿、黄牛、山羊和绵羊的CDS区核酸序列和氨基酸序列的一致性均在84%以上。该基因编码的蛋白含有2个双链RNA结合基序和一个脱氨酶结构域。猪ADAR2在检测的各组织中均表达,其中在肺中的表达量最高。综上所述,本研究成功克隆了猪ADAR2基因全长cDNA序列,并且发现其在猪体内广泛表达,为深入研究ADAR2的功能奠定了良好的基础。

关 键 词:ADAR2  表达  cDNA克隆  RACE    
收稿时间:2020-08-06

The Full-length cDNA Cloning,Sequence Characterization and Expression Pattern Analysis of Porcine ADAR2 Gene
ZHANG Yuebo,WANG Ligang,HOU Xinhua,LIU Xin,YAN Hua,ZHANG Longchao,WANG Lixian.The Full-length cDNA Cloning,Sequence Characterization and Expression Pattern Analysis of Porcine ADAR2 Gene[J].Acta Veterinaria et Zootechnica Sinica,2021,52(3):620-629.
Authors:ZHANG Yuebo  WANG Ligang  HOU Xinhua  LIU Xin  YAN Hua  ZHANG Longchao  WANG Lixian
Institution:1. Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing 100193, China;2. College of Animal Science and Technology, Hunan Agricultural University, Changsha 410128, China
Abstract:This study aimed to clone the full-length cDNA of the porcine ADAR2 gene and explore its expression pattern in different tissues of pigs.Rapid-amplification of cDNA ends(RACE)was used to clone the full-length cDNA sequence of the ADAR2 gene in Large White pigs and the sequence was analyzed by bioinformatics.Real-time PCR was used to detect the ADAR2 mRNA expression in the heart,liver,lung,kidney,spleen,brain,small intestine,muscle and backfat of 35-day-old pigs.Porcine ADAR2 cDNA sequence of 6305 bp was cloned,which contained 12 exons and encoded 704 amino acids.The nucleic acid and amino acid sequences shared a high identity(>84%)with that of other mammals including human,chimpanzee,macaque,gibbon,cow,goat and sheep.The deduced ADAR2 had two double-stranded RNA binding motifs and an adenosine deaminase domain.Real-time PCR results showed that the ADAR2 expressed in all the detected tissues,and had the highest expression in the lung.The full-length cDNA sequence of porcine ADAR2 gene was successfully cloned,and it was widely expressed in tissues of pigs.These findings provide a solid foundation for further function study of ADAR2.
Keywords:ADAR2  expression  cDNA clone  RACE  swine
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