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利用Cyt b基因序列研究翘嘴红鲌的系统发生
引用本文:黄丽英,丁诗华,张海琪,杜建明,何中央.利用Cyt b基因序列研究翘嘴红鲌的系统发生[J].西南农业大学学报,2005,27(6):909-913.
作者姓名:黄丽英  丁诗华  张海琪  杜建明  何中央
作者单位:[1]浙江省水产技术推广总站,浙江杭州310012 [2]西南大学水产水文学院水产生物技术实验室,重庆400716
基金项目:浙江省农业厅水产种子种苗工程资助项目(334006-2)
摘    要:线粒体细胞色素b基因序列分析可显示种间及种内遗传差异,广泛用于种类鉴定和系统发生研究。为了阐明翘嘴红鲌与其他鳊亚科鱼类的亲缘关系,扩增并测定了翘嘴红鲌的414bp细胞色素b基因片段序列。所获序列与4种鳊亚科鱼类细胞色素b基因的相应序列进行比较,发现共有61个多态性核苷酸位点(14.73%),大多数位点出现在密码子的第3位且主要为碱基转换。翘嘴红鲌与鳊之间的序列同源性最高,为93.48%,与广东鲂、三角鲂和团头鲂的序列同源性则分别为90.58%,90.82%,91.30%。以鲤为外群,分别利用MP法和NJ法分析上述序列数据,获得相似的系统发生树。该结果显示,翘嘴红鲌和鳊聚为1个支系,广东鲂、三角鲂以及团头鲂则聚为另1个支系,说明翘嘴红鲌与鳊的亲缘关系较近,而与广东鲂、三角鲂及团头鲂的亲缘关系则较远。

关 键 词:翘嘴红鲌  线粒体DNA  细胞色素b基因  序列分析  系统发生
文章编号:1000-2642(2005)06-0909-05
收稿时间:2005-06-28
修稿时间:2005-06-28

PHYLOGENETIC RELATIONSHIP OF ERYTHROCULTER ILISHAEFORMIS WITH OTHER FOUR ABRAMIDINAE SPECIES BASED ON CYTOCHROME b GENE SEQUENCES
HUANG Li - ying, DING Shi - hua , ZHANG Hai - qi, DU Jian - ming, HE Zhong - yang.PHYLOGENETIC RELATIONSHIP OF ERYTHROCULTER ILISHAEFORMIS WITH OTHER FOUR ABRAMIDINAE SPECIES BASED ON CYTOCHROME b GENE SEQUENCES[J].Journal of Southwest Agricultural University,2005,27(6):909-913.
Authors:HUANG Li - ying  DING Shi - hua  ZHANG Hai - qi  DU Jian - ming  HE Zhong - yang
Institution:1. Zhejinag Fisheries Technical Extension Center, Hangzhou, Zhejiang 310012, China; 2. College of Aquaculture and Hydrology, Southwest University, Chongqing 400716, China
Abstract:A 414-bp fragment of Cytochrome b gene from Erythroculter ilisshaeformis was PCR amplified and sequenced.Alignment of this fragment with the sequences of other 4 Abramidinae species revealed 61 polymorphic nucleotide sites(14.73% of the total),most of which were base transitions and occurred at the third position of the codons.The sequence homology of E.ilisshaeformis to Parabramis pekinesis,Megalobrama hoffmanni,M.terminalis and M.amblycephala was 93.48%,90.58%,90.82% and 91.30%,respectively.After the sequence data were analyzed by the methods of maximum parsimony and neighbor-joining,using Cyprinus carpio as an outgroup species,two similar phylogenetic trees were obtained.Based on the trees,E.ilisshaeformis and P.pekinesis were clustered into one clade and the other 3 species into another,thus indicating that E.ilisshaeformis shared a closer relationship to P.pekinesis than to Megalobrama hoffmanni,M.terminalis and M.amblycephala.
Keywords:Erythroculter ilisshaeformis  mitochondrial DNA  cytochrome b gene  sequence analysis  phylogenetics
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