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青海骆驼线粒体DNA D-loop区遗传多样性研究
引用本文:高 雪,晁生玉,王启菊,孟克达拉,乌兰巴特尔,贾功雪.青海骆驼线粒体DNA D-loop区遗传多样性研究[J].西北农业学报,2024(1):1-7.
作者姓名:高 雪  晁生玉  王启菊  孟克达拉  乌兰巴特尔  贾功雪
作者单位:(1.中国科学院 西北高原生物研究所 高原生物适应与进化重点实验室 青海省动物生态基因组学重点实验室,西宁 810008;2.中国科学院大学,北京 100049;3.青海省海西州农牧业技术推广服务中心,青海海西 817099;4.青海省海西州动物疫病预防控制中心,青海海西 817099;5.海西州农牧产品质量安全检验检测中心,青海海西 817099)
基金项目:第二次青藏高原综合考察研究专题(2019QZKK0302);海西州科技创新能力建设计划(2019-N-304);中国科学院青年创新促进会(2021432);青海省“昆仑英才-高端创新创业人才”。
摘    要:旨在研究青海骆驼遗传多样性,揭示青海骆驼的母系起源进化。采集柴达木地区3个青海骆驼类群耳组织样品88份并提取基因组DNA,利用PCR扩增和基因测序分析线粒体DNA D-loop序列,并与蒙古、内蒙古双峰驼进行比较。结果表明:D-loop序列中共检测到96个多态位点,定义了27种单倍型。3个青海骆驼类群占有16个单倍型,而蒙古双峰驼独有7个单倍型,内蒙古双峰驼独有4个单倍型。系统发育分析显示出两个独立的分支:第一支为青海骆驼3个类群与蒙古双峰驼,且德令哈双峰驼与其他两个类群间存在明显界限;第二支为内蒙古双峰驼。青海骆驼与内蒙古双峰驼的遗传距离均较远,但与蒙古双峰驼的遗传距离较近。因此,青海骆驼母系起源更倾向于蒙古双峰驼而非内蒙古双峰驼。

关 键 词:柴达木双峰驼  线粒体DNA  系统发育  遗传多样性  单倍型

Genetic Diversity of Mitochondrial DNA D-loop Region in Qinghai Camel
GAO Xue,CHAO Shengyu,WANG Qiju,Mengke Dar,Ulan Bateerand JIA Gongxue.Genetic Diversity of Mitochondrial DNA D-loop Region in Qinghai Camel[J].Acta Agriculturae Boreali-occidentalis Sinica,2024(1):1-7.
Authors:GAO Xue  CHAO Shengyu  WANG Qiju  Mengke Dar  Ulan Bateerand JIA Gongxue
Abstract:To evaluate the genetic diversity and maternal origin of Qinghai camel,a total of 88 ear tissue samples were collected from three distributed ecotypes of Qinghai camel.Genomic DNA extraction was performed to obtain the samples,after which the D-loop region on mitochondrial DNA was amplified and sequenced,and sequences were compared with those of Mongolian and Inner Mongolian Bactrian camels.The results showed that a total of 96 polymorphic loci were detected in D-loop sequences and 27 haplotypes were identified.There were 16 haplotypes shared by Qinghai camel.The Mongolian Bactrian camel had seven haplotypes,while the Inner Mongolian Bactrian camel had four haplotypes.Phylogenetic analysis revealed two distinct branches.The first branch consisted of three ecotypes of Qinghai camel and Mongolian Bactrian camel,with the Delingha Bactrian camel exhibiting a clear distinction from the other two ecotypes.The second branch was predominantly represented by Inner Mongolian Bactrian camel.The genetic distance between Qinghai camel and Inner Mongolia Bactrian camel was significantly greater than that between Qinghai camel and Mongolia Bactrian camel.In conclusion,the maternal origin of Qinghai camel is more closely related to Mongolian Bactrian camel than to the Inner Mongolian Bactrian camel.
Keywords:Qaidam Bactrian camel  Mitochondrial DNA  Phylogeny  Genetic diversity  Haplotype
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