Identification of a candidate gene for resistance to root‐knot nematode in a wild peach and screening of its polymorphisms

Root‐knot nematode disease, caused by Meloidogyne species, is an important soil‐borne disease of peach (Prunus persica L.) worldwide. To identify a major locus of genetic resistance to M. incognita, PkMi, in a wild peach species, we reconstructed a linkage group in a BC₁ population of 187 lines using resistance gene analogue markers surrounding the PkMi locus. A resistance gene analogue marker, ppa021062m, co‐segregated with the PkMi locus and was therefore considered a strong candidate for PkMi. Phylogenetic analysis of the deduced protein sequences of ppa021062m, together with the other seven genes for nematode resistance, allowed ppa021062m to be assigned to the Toll/Interleukin1 Receptor‐Nucleotide Binding Site‐Leucine Rich Repeat class, similar to Ma in myrobalan plum (P. cerasifera). Comparative analysis of the candidate gene sequence in four genotypes that had different levels of resistance to root‐knot nematode disease showed that most non‐synonymous SNPs in the genic region were distributed in the TIR and NBS motifs. This study enhances our understanding of the genetic and molecular control of resistance to root‐knot nematode disease in peach.