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利用实时荧光PCR 方法检测香蕉软腐细菌
引用本文:豆亚亚,阮小蕾,袁月,刘琼光,李华平.利用实时荧光PCR 方法检测香蕉软腐细菌[J].园艺学报,2013,40(2):380-388.
作者姓名:豆亚亚  阮小蕾  袁月  刘琼光  李华平
作者单位:(1 亚热带农业生物资源保护与利用国家重点实验室,广州 510642;2 华南农业大学资源环境学院,广州 510642)
基金项目:现代农业产业技术体系建设专项(CAR-32-05)
摘    要: 由Dickeya spp.引起的香蕉细菌性软腐病是近年来在中国广东发生的一种严重危害香蕉的病 害,检测方法的建立和应用是防止病害传播和实时防治的重要手段。依据报道的Dickeya spp.通用引物, 建立了用于香蕉细菌性软腐病发病植株和带菌土壤检测的实时荧光PCR 方法。优化后的检测体系对香蕉 软腐细菌(XJ8-3-3)靶片段克隆质粒DNA 的检测灵敏度可达到2.4 × 10-5 ng · μL-1,对菌悬液的检测灵敏 度可达到4.0 × 102 cfu · mL-1,而常规PCR 对其检测的灵敏度为2.4 × 10-3 ng · μL-1 和4.0 × 104 cfu · mL-1, 实时荧光PCR 的灵敏度比常规PCR 高100 倍。利用实时荧光PCR 能够快速的检出香蕉细菌性软腐病发 病植株和带菌土壤中的病原菌量,对梯度稀释的菌悬液接种的带菌土壤检测结果表明,可检测到病菌DNA 最低含量为0.35 pg · L-1。该方法适用于对香蕉软腐病菌的检测和监控。

关 键 词:香蕉  软腐病菌  实时荧光定量PCR  检测

Utilization of a Real-time PCR-based Approach for Rapid Quantitative Detection of Bacterial Soft Rot of Banana
DOU Ya-ya,RUAN Xiao-lei,YUAN Yue,LIU Qiong-guang,and LI Hua-ping.Utilization of a Real-time PCR-based Approach for Rapid Quantitative Detection of Bacterial Soft Rot of Banana[J].Acta Horticulturae Sinica,2013,40(2):380-388.
Authors:DOU Ya-ya  RUAN Xiao-lei  YUAN Yue  LIU Qiong-guang  and LI Hua-ping
Institution:(1State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources,Guangzhou,Guangdong
510642,China;2 College of Natural Resources and Environment,South China Agricultural University,Guangzhou,
Guangdong 510642,China)
Abstract:Bacterial soft rot of banana,caused by Dickeya spp.,is a destructive disease on banana discovered recently in Guangdong,China. Establishment and application of detection method is an important means to prevent the disease from spreading and occuring. A real-time fluorescent PCR assay was developed based on the universal primers for detecting Dickeya spp. from infectious banana plants and soil. The results showed that the lowest detection limits for the Plasmid DNA and bacterial suspensions of bacterial isolate(XJ8-3-3)was 2.4 × 10-5 ng · μL-1,and 4.0 × 102 cfu · mL-1,respectively,by the optimized real-time fluorescent PCR system,which indicated that detection sensitivity with real-time fluorescent PCR was at least hundred times higher than that with conventional PCR. The bacterial DNA of XJ8-3-3 in the infected banana plant tissues and soil could be accurately and rapidly identified by the developed detection system. The detection limit of bacterial DNA from the soil inoculated with different concentrations of XJ8-3-3 suspensions,was 0.35 pg · μL-1 per reaction in real-time quantitative PCR. In conclusion,this real-time PCR method could be utilized to assist in the implementation of quarantine measures for prevention and control of the bacterial soft rot of banana caused by Dickeya spp.
Keywords:banana  bacterial soft rot  real-time fluorescent PCR  detection
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