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甘蓝型油菜矮化突变体抑制消减cDNA文库 的构建及初步分析
引用本文:李小艳,赵云,周云涛,李熠毅,王茂林.甘蓝型油菜矮化突变体抑制消减cDNA文库 的构建及初步分析[J].中国油料作物学报,2006,29(4):396-402.
作者姓名:李小艳  赵云  周云涛  李熠毅  王茂林
作者单位:四川大学生命科学学院, 成都 610064
基金项目:国家高技术研究发展计划(863计划);四川省科技攻关项目
摘    要:采用抑制性消减杂交(suppression subtractive hybridization, SSH)技术,以甘蓝型油菜矮化突变体“NDF-1”为实验方(tester),野生型“3529”为驱动方(driver)构建植株差异表达的抑制消减cDNA文库。所建cDNA文库的插入片段大小主要集中在100 bp~1000 bp之间。斑点杂交筛选得到了32个阳性克隆,序列测定和同源性对比分析表明,其中的12个克隆功能未知,其余涉及到激素信号转导、第二信使、光合作用、脂肪酸代谢及衰老等多个方面。还对部分差异表达基因的功能进行了分析。为进一步认识油菜植株矮化的机理奠定了基础。

关 键 词:甘蓝型油菜  矮化突变  抑制消减杂交  cDNA文库
文章编号:1007-9084(2006)04-0396-07
收稿时间:2005-11-02
修稿时间:2005-11-02

Construction and primary analysis of suppression subtractive library of dwarf mutant 'NDF-1' in Brassica napus
LI Xiao-yan,ZHAO Yun,ZHOU Yun-tao,LI Yi-yi,WANG Mao-lin.Construction and primary analysis of suppression subtractive library of dwarf mutant ''''NDF-1'''' in Brassica napus[J].Chinese Journal of Oil Crop Sciences,2006,29(4):396-402.
Authors:LI Xiao-yan  ZHAO Yun  ZHOU Yun-tao  LI Yi-yi  WANG Mao-lin
Institution:College of Life Sciences, Sichuan University, Chengdu 610064, China
Abstract:cDNA library of differential expressed genes of a dwarf mutant 'NDF-1' and its wild type '3529' was constructed by suppression subtractive hybridization(SSH),with dwarf mutant 'NDF-1' as tester and '3529' as driver,respectively.These clones were verified by colony PCR.The recombined efficiencies of the reverse subtractive library were 90%.The inserted fragment size ranged from 100bp to 1 000bp.One hundred clones in the reverse subtractive library were screened by dot blot and thirty-two positive clones were obtained.They were sequenced and analyzed for homology by BLAST search.Seventeen of these clones were annotated into several functional categories including signaling,secondary messenger,photosynthesis,fatty acid metabolism,transport and accumulation,and senescence.Others remain functionally unknown.Some of these putative genes with high homology to known genes in Genbank were also functionally analyzed.The successful construction of subtractive cDNA library provided a basis for further study of mechanism for plant dwarfness.
Keywords:Brassica napus L    Dwarf  Suppression subtractive hybridization  cDNA library
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