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正交设计优化花菜类SRAP分子标记体系的研究
引用本文:李媛,姚雪琴,谢祝捷,龚义勤,柳李旺. 正交设计优化花菜类SRAP分子标记体系的研究[J]. 上海农业学报, 2010, 26(1): 42-45
作者姓名:李媛  姚雪琴  谢祝捷  龚义勤  柳李旺
作者单位:1. 上海市农业科学院园艺研究所,上海市设施园艺技术重点实验室,上海,201106;南京农业大学园艺学院,南京,210095
2. 上海市农业科学院园艺研究所,上海市设施园艺技术重点实验室,上海,201106
3. 南京农业大学园艺学院,南京,210095
基金项目:上海市科委科技攻关计划 
摘    要:
采用正交设计,从Mg^2+、dNTPs、引物三种因素3个水平对青花菜SRAP反应体系进行优化,确立适合青花菜的SRAP反应体系,并在6个青花菜和花椰菜品种中进行验证。结果表明:20μ/L反应体系中适宜体系的浓度dNTPs为0.2mmol/L、Mg^2+为1.25mmol/L、上下引物各0.4μmol/L、DNA为20ng、Taq酶1.2U、退火温度为50℃。

关 键 词:青花菜  花椰菜  SRAP  体系优化

Optimization of the SRAP reaction system in broccoli and cauliflower by orthogonal design
LI Yuan,YAO Xue-qin,XIE Zhu-jie,GONG Yi-qin,LIU Li-wang. Optimization of the SRAP reaction system in broccoli and cauliflower by orthogonal design[J]. Acta Agriculturae Shanghai, 2010, 26(1): 42-45
Authors:LI Yuan  YAO Xue-qin  XIE Zhu-jie  GONG Yi-qin  LIU Li-wang
Affiliation:LI Yuan1,2,YAO Xue-qin1,XIE Zhu-jie1,GONG Yi-qin2,LIU Li-wang2(1Horticultural Research Institute,SAAS,Shanghai Key Laboratory of Protected HorticulturalTechnology,Shanghai 201106,China,2College of Horticulture,Nanjing Agricultural University,Nanjing 210095,China)
Abstract:
By an orthogonal design the reaction system of brocco's SRAP(sequence-related amplified polymorphism)was optimized in terms of Mg~(2+),dNTPs and primers three factors and their three levels,and then the optimized SRAP reaction system was verified with 6 broccoli and cauliflower varieties.The result indicated that in a 20 μL reaction system the appropriate concentrations of dNTPs,Mg~(2+),and forward and reverse primers were respectively 0.2 mmol/L,1.25 mmol/L,0.4 μmol/L and 0.4 μmol/L,the DNA of template was 20 ng,and Taq DNA polymerase 1.2 U,the best annealing temperature was 50 ℃.The results offer the technique basis of using SRAP technology to study broccoli germplasm resource.
Keywords:SRAP  Broccoli  Cauliflower  SRAP(Sequence-related amplified polymorphism)  System optimization
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