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Global mapping of the yeast genetic interaction network
Authors:Tong Amy Hin Yan  Lesage Guillaume  Bader Gary D  Ding Huiming  Xu Hong  Xin Xiaofeng  Young James  Berriz Gabriel F  Brost Renee L  Chang Michael  Chen YiQun  Cheng Xin  Chua Gordon  Friesen Helena  Goldberg Debra S  Haynes Jennifer  Humphries Christine  He Grace  Hussein Shamiza  Ke Lizhu  Krogan Nevan  Li Zhijian  Levinson Joshua N  Lu Hong  Ménard Patrice  Munyana Christella  Parsons Ainslie B  Ryan Owen  Tonikian Raffi  Roberts Tania  Sdicu Anne-Marie  Shapiro Jesse  Sheikh Bilal  Suter Bernhard  Wong Sharyl L  Zhang Lan V  Zhu Hongwei  Burd Christopher G  Munro Sean  Sander Chris  Rine Jasper  Greenblatt Jack  Peter Matthias
Institution:Banting and Best Department of Medical Research, University of Toronto, Toronto, ON, Canada M5G 1L6.
Abstract:A genetic interaction network containing approximately 1000 genes and approximately 4000 interactions was mapped by crossing mutations in 132 different query genes into a set of approximately 4700 viable gene yeast deletion mutants and scoring the double mutant progeny for fitness defects. Network connectivity was predictive of function because interactions often occurred among functionally related genes, and similar patterns of interactions tended to identify components of the same pathway. The genetic network exhibited dense local neighborhoods; therefore, the position of a gene on a partially mapped network is predictive of other genetic interactions. Because digenic interactions are common in yeast, similar networks may underlie the complex genetics associated with inherited phenotypes in other organisms.
Keywords:
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