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Genetic diversity and population structure of Brachiaria brizantha (A.Rich.) Stapf accessions from Ethiopia
Authors:Asheber Tegegn  Martina Kyalo  Collins Mutai  Jean Hanson  Getnet Asefa  Appolinaire Djikeng
Affiliation:1. Ethiopian Institute of Agricultural Research, Addis Ababa, Ethiopia;2. Biosciences Eastern and Central Africa–International Livestock Research Institute (BecA-ILRI) Hub, Nairobi, Kenya;3. Biosciences Eastern and Central Africa–International Livestock Research Institute (BecA-ILRI) Hub, Nairobi, Kenya;4. International Livestock Research Institute, Addis Ababa, Ethiopia;5. Current address: University of Edinburgh, Edinburgh, UK
Abstract:
Brachiaria is a tropical, warm-season grass native to Africa. It is an extensively cultivated forage in the tropics with proven benefits on livestock productivity. Brachiaria is well-known for high biomass production, animal nutrition, carbon sequestration, biological nitrification inhibition, soil conservation, and adaptation to drought and low fertility soils. However, the use of Brachiaria grass for fodder production in Africa has been little explored largely due to lack of cultivars suitable to different production environments. The exploration and use of natural diversity is fundamental for an efficient Brachiaria breeding program. We analysed genetic diversity and population structure of 112 Ethiopian Brachiaria brizantha accessions using 23 microsatellite markers. A total of 459 alleles were detected with an average polymorphic information content of 0.75 suggesting high discriminating ability of these markers. The molecular variance analysis showed a high contribution (86%) of within-cluster differences to the total variation. Three allelic pools revealed by STRUCTURE analysis in 112 accessions were in agreement with the clustering patterns seen in neighbor-joining tree and principal coordinates analyses. A core collection of 39 B. brizantha accessions was constituted. This study concludes a high genetic diversity of Ethiopian B. brizantha accessions and their importance in Brachiaria breeding programs.
Keywords:accessions  Brachiaria brizantha  core collection  genetic diversity  population structure
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