| 大豆基因组GmRAV同源基因的生物信息学分析 |
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| 引用本文： | 赵 琳,罗秋兰,高 阳,滕卫丽,李海燕,陈李淼,李文滨. 大豆基因组GmRAV同源基因的生物信息学分析[J]. 中国油料作物学报, 2011, 33(6): 550-554 |
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| 作者姓名： | 赵 琳 罗秋兰 高 阳 滕卫丽 李海燕 陈李淼 李文滨 |
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| 作者单位： | 大豆生物学教育部重点实验室，东北农业大学大豆研究所 黑龙江 哈尔滨 150030 |
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| 基金项目： | 黑龙江省教育厅科学技术研究面上项目(11541029) |
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| 摘 要： | 利用Phytozome数据库、NCBI网站,和MEGA4.0、ClustalX软件对大豆(Glycine max)基因组中RAV同源基因进行了生物信息学分析,发现大豆RAV基因有4个拷贝,分别分布于第1、2、10和20号染色体上；RAV蛋白含有AP2/ERF (53～ 108)和B3( 172～ 286)结构域.豆科植...
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| 关 键 词： | 大豆 RAV 光周期 AP2/ERF结构域 B3结构域 |
Bioinformatics analysis of GmRAV homologs in soybean genome |
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| ZHAO Lin,LUO Qiu-lan,GAO Yang,TENG Wei-li,LI Hai-yan,CHEN Li-miao,LI Wen-bin. Bioinformatics analysis of GmRAV homologs in soybean genome[J]. Chinese Journal of Oil Crop Sciences, 2011, 33(6): 550-554 |
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| Authors: | ZHAO Lin LUO Qiu-lan GAO Yang TENG Wei-li LI Hai-yan CHEN Li-miao LI Wen-bin |
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| Affiliation: | ZHAO Lin,LUO Qiu-lan,GAO Yang,TENG Wei-li,LI Hai-yan,CHEN Li-miao,LI Wen-bin(Key Laboratory of Soybean Biology of Chinese Education Ministry,Soybean Research Institute,Northeast Agriculture University,Harbin 150030,China) |
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| Abstract: | Bioinformatics of GmRAV homologs in soybean genome was analyzed using Phytome database,NCBI website,MEGA 4.0 and ClustalX softwares.Four copies of soybean GmRAV homologs were found to distribute on chromosome 1,2,10 and 20,respectively.GmRAV protein had AP2/ERF domain and B3 domain.According to RAV sequence and phylogenetic relations,Glycine max,Galega orientalis and Medicago truncatula had closer relationships.Among four homologs in soybean,GmRAV and Glyma20g32730 had close relationship,and were in the sam... |
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| Keywords: | Soybean RAV Photoperiod AP2/ERF domain B3 domain |
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