牛CXCR1基因编码区单核苷酸多态性的研究 |
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引用本文: | 官久强,王洪梅,王长法,李秋玲,帅素容,黄金明,侯明海,仲跻峰.牛CXCR1基因编码区单核苷酸多态性的研究[J].农业生物技术学报,2009,17(4):603-608. |
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作者姓名: | 官久强 王洪梅 王长法 李秋玲 帅素容 黄金明 侯明海 仲跻峰 |
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作者单位: | 1. 山东省农科院奶牛研究中心,四川农业大学动物科技学院 ;2. 山东省农业科学院奶牛研究中心; |
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摘 要: | 本研究采用巢氏PCR、DNA测序和CRS-PCR方法,研究中国荷斯坦牛、鲁西黄牛、渤海黑牛的CXCR1基因编码区的单核苷酸多态性(SNPs),发现了819(G/A)、995(G/A)和1008(C/T)3个SNPs,其中995(G/A)和1008(C/T)为首次报道的两个位点,995(G/A)导致氨基酸的改变Arg422His。CXCR1基因819(A/G)、995(A/G)、1008(C/T)3个位点在中国荷斯坦牛、鲁西黄牛、渤海黑牛群体的优势等位基因相同,分别为G、G、C,其等位基因频率分别为0.63/0.73/0.71、0.60/0.85/0.71、0.74/0.76/0.71。经χ2适合性检验,鲁西黄牛在995(A/G)和1008(C/T)位点达到Hardy-Weinberg平衡状态(P>0.05);渤海黑牛的所有位点均达到Hardy-Weinberg平衡状态,荷斯坦牛在3个位点均未达到Hardy-Weinberg平衡状态(P<0.05)。3个品种牛在819(A/G)和1008(C/T)位点均表现为中度多态(0.25
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关 键 词: | 牛 CXCR1 单核苷酸多态性 优势等位基因 |
收稿时间: | 2000-8-8 |
修稿时间: | 2008-9-20 |
Single Nucleotide Polymorphisms (SNPs) within the Coding Regions of CXCR1 Gene in Bos taurus |
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Abstract: | The single nucleotide polymorphisms(SNPs) within the coding regions of CXCR1 gene in Holstein cattle and Luxi Yellow cattle and Bohai Black cattle were investigated by nested-PCR, DNA sequencing technology and CRS-PCR method. Sequencing results showed that three SNPs were identified, which they were 819(G/A),995(G/A),1008(C/T). 819(G/A) and 1008(C/T) were nonsense mutations, but 995(G/A) resulted amino acids alteration Arg422His.In Holstein cattle and Luxi Yellow cattle and Bohai Black cattle, G and G and T predominan allele were identical at 819(G/A) and 995(G/A) and 1008(C/T), which were G , G , T and the allelic frequencies were 0.63/0.73/0.71, 0.60/0.85/0.71, 0.74/0.76/0.71 respectivly. Chi-square test indicated that 995(G/A)and 1008(C/T) of Luxi Yellow cattle and all the sites of Bohai Black cattle were in accordance with the Hardy-Weinberg equilibrium (P>0.05), while all polymorphic sites were not meet Hardy-Weinberg equilibrium (P<0.05) in Chinese Holstein cattle. The value of polymorphism information content indicated that 819(G/A) and 1008(C/T)s were moderate polymorphism in three breeds(0.25<PIC<0.5), while 995(G/A) were slight polymorphism in Luxi Yellow cattle and were moderate polymorphism in other two breeds. |
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