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| 苹果EST数据分析平台的构建及初步应用 | |
| 引用本文： | 岳鹏,钟翡,雷恒久,柳爱玲,刘兰英,李天红.苹果EST数据分析平台的构建及初步应用[J].中国农业大学学报,2011,16(4):134-140. |
| 作者姓名： | 岳鹏 钟翡 雷恒久 柳爱玲 刘兰英 李天红 |
| 作者单位： | 1. 中国农业大学农学与生物技术学院／北京市果树逆境生理与分子生物学重点开放实验室,北京100193／张家口广播电视大学,河北张家口075000 2. 中国农业大学农学与生物技术学院／北京市果树逆境生理与分子生物学重点开放实验室,北京,100193 3. 北京市海淀区植物组织培养技术实验室,北京,100091 |
| 基金项目： | 国家自然科学基金资助项目(30871696); 公益性行业(农业)科研专项经费项目(201003021) |
| 摘 要： | 为更有效地利用苹果EST公共数据资源,方便信息交流与共享,本研究构建了苹果EST数据分析平台Malus domestica Micro-Workstation,并整合了专为苹果定制的序列延伸系统。该数据分析平台具有本地信息查询、序列简单注释和短序列延伸等功能。以所建平台为辅助工具,从已公布的324 308条苹果EST序... |
| 关 键 词： | 苹果 EST 数据分析平台 序列延伸 干旱胁迫 |
| 收稿时间： | 2010/11/5 0:00:00 |
Construction of EST-data analysis platform for Malus domesticaand its preliminary application |
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| YUE Peng,ZHONG Fei,LEI Heng-jiu,LIU Ai-ling,LIU Lan-ying and LI Tian-hong.Construction of EST-data analysis platform for Malus domesticaand its preliminary application[J].Journal of China Agricultural University,2011,16(4):134-140. | |
| Authors: | YUE Peng ZHONG Fei LEI Heng-jiu LIU Ai-ling LIU Lan-ying and LI Tian-hong |
| Institution: | YUE Peng1,2,ZHONG Fei1,LEI Heng-jiu1,LIU Ai-ling1,LIU Lan-ying3,LI Tian-hong1(1.College of Agronomy and Biotechnology/Key Laboratory of Stress Physiology and Molecular Biology for Fruit Trees of Beijing,China Agricultural University,Beijing 100193,China,2.Zhangjiakou Radio and TV University,Zhangjiakou 075000,3.Laboratory of Plant Tissue Culture Technology,Haidian District,Beijing 100091,China) |
| Abstract: | In order to use ESTs data for Malus domestica more efficiently and conveniently,an EST-data analysis platform as being named Malus domestica Micro-Workstation was constructed and a sequence extending system was built on this basis.Upon test with the platform,the drought stress-related genes from 324 308 ESTs of Malus domestica were examed for prediction.The results showed that 1 979 sequences of the drought stress-related genes were found,in which 109 sequences were identified with potentially full-length c... |
| Keywords: | Malus domestica EST data analysis platform sequence extend drought stress |
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