Sedimentary characterization of Tagus estuarine beaches (Portugal)

Background, Aim and Scope  The distribution of sediments in estuarine beaches is controlled by the interactions between sediment supply, hydrodynamic processes and human intervention. The main purpose of this study is to characterize the sediments of Tagus estuarine beaches in order to understand their origin and to contribute to a better knowledge of the Tagus estuary sediment budget. Methods  Surface sediment samples were collected across beach profiles and sand grain size analysis was performed by dry sieving. Grain size statistics for the median (d₅₀) and standard deviation (SDM) were obtained using the Moment method. This study was complemented by a qualitative evaluation of the sediment composition. Cross-shore topographic surveys were conducted for selected sampling sites. Results  Tagus estuarine beach sediments are mainly composed of quartz sand particles which are fine-grained and well sorted near the mouth of the estuary and medium to coarse-grained and moderately sorted in the inner domain. Compositional results show evidence of active anthropogenic sediment sources, especially in the coarser fractions. Discussion  The analysis of the textural and compositional characteristics of beach sediments in the inner estuarine domain is compatible with local sedimentary sources, while a marine signature is present at the mouth and inlet channel sediments. In the inner domain, differences in the sedimentary processes are represented by the textural characteristics of the sediments, such as the sorting degree and the gravel content. Sediment characteristics also reflect human intervention in the system, with the introduction of anthropogenic and allochthonous particles and the mixture of sediments from different sources. Conclusions  The sediments of the inner Tagus estuarine beaches are derived from local Plio-Pleistocene outcrops while inlet and outer estuary beaches reveal a dominant marine source. Beach textural variability observed in the inner domain is not related to wave forcing gradients, but mainly to variations in the sedimentary processes along the estuarine margins and to human intervention. Results show that the Tagus estuarine beaches depended, almost exclusively, on sediment input from local sources until the last century. With increasing human occupation, sediment transfers became dominated by anthropogenically related activities mainly connected with the occupation of estuarine margins and dredging. Recommendations and Perspectives  Further studies should extend the present level of knowledge in what concerns sand transport patterns through additional compositional and geochemical analysis, and the development of new techniques in order to allow the quantitative evaluation of the impact of human activities on the sediment budget.     

Yield and olive oil characteristics of a low-density orchard (cv. Cordovil) subjected to different irrigation regimes

The impact of different irrigation scheduling regimes on the quantity and quality of olive oil from a low-density olive grove in southern Portugal was assessed during the irrigation seasons of 2006 and 2007. Olive trees were subjected to one of the following treatments: A—full irrigation; B—sustained deficit irrigation (SDI) with 60% of ETc water applied with irrigation; C—regulated deficit irrigation (RDI) with irrigation water applied at three critical phases: before flowering, at the beginning of pit hardening and before crop harvesting and D—rain-fed treatment. Olive oil yield was significantly higher than rain-fed conditions in 2006, an “on year” of significant rainfall during summer. No significant yield differences were observed in the following “off year”. Among the irrigated treatments, olive oil production of treatment B was 32.5% and 40.1% higher in 2006 and 2007, respectively than the fully irrigated treatment A, despite receiving 49% less irrigation water. Such strategy could allow for an efficient use of water in the region, of very limited available resources, and for modest but important oil yield increase. Nonetheless, on the “on year” of 2006 treatment C used 13.9% of the water applied to treatment B and produced only 23.9% less olive fruits which could also make it illegible as the next possible strategy to use for irrigating olive trees in the region, provided that water is secured latter in the summer, a period of vital importance for oil accumulation and very sensitive to water stress as the poor results of 2007 revealed. The different treatment water regimes did not impact on the chemical characteristics of olive oils that were within the set threshold limits. Similarly, the sensory characteristics of the olive oils as well as bitterness and pungency were negligible for all treatments allowing them to be assessed as of “superior quality”.Overall, irrigation treatments had no influence on the commercial value of produced oils, being all classified as “extra virgin”. Such funding may be of vital importance to farmers willing to further their irrigation area, save water and still retain the protected designation of origin (PDO) seal of quality for their oil.     

Collection of Lupinus angustifolius L. Germplasm and Characterisation of Morphological and Molecular Diversity

Lupinus angustifolius L. is a Mediterranean species, domesticated in the 20th century, representing an important grain legume crop in Australia and other countries. This work is focused on the collection of wild germplasm and on the characterisation of morphological and molecular diversity of germplasm accessions. It reports the collection of 81 wild L. angustifolius accessions from the South and Centre of Portugal, available at the ‘Instituto Superior de Agronomia Gene Bank’, with subsequent morphological and molecular characterisation of a selection of these and other accessions. A multivariate analysis of morphological traits on 88 L. angustifolius accessions (including 59 wild Portuguese accessions, 15 cultivars and 14 breeding lines) showed a cline of variation on wild germplasm, with plants from Southern Portugal characterised by earlier flowering, higher vegetative development and larger seeds. AFLP and ISSR molecular markers grouped modern cultivars as sub-clusters within the wider diversity of wild germplasm, revealing the narrow pool of genetic diversity on which domesticated accessions are based. The importance of preserving, characterising and using wild genetic resources for L. angustifolius crop improvement is outlined by the results obtained.     

Trends in NE Atlantic landings (southern Portugal): identifying the relative importance of fisheries and environmental variables

Time series of commercial landings from the Algarve (southern Portugal) from 1982 to 1999 were analyzed using min/max autocorrelation factor analysis (MAFA) and dynamic factor analysis (DFA). These techniques were used to identify trends and explore the relationships between the response variables (annual landings of 12 species) and explanatory variables [sea surface temperature, rainfall, an upwelling index, Guadiana river (south‐east Portugal) flow, the North Atlantic oscillation, the number of licensed fishing vessels and the number of commercial fishermen]. Landings were more highly correlated with non‐lagged environmental variables and in particular with Guadiana river flow. Both techniques gave coherent results, with the most important trend being a steady decline over time. A DFA model with two explanatory variables (Guadiana river flow and number of fishermen) and three common trends (smoothing functions over time) gave good fits to 10 of the 12 species. Results of other models indicated that river flow is the more important explanatory variable in this model. Changes in the mean flow and discharge regime of the Guadiana river resulting from the construction of the Alqueva dam, completed in 2002, are therefore likely to have a significant and deleterious impact on Algarve fisheries landings.     

Evolution of forest cover in Portugal: A review of the 12th–20th centuries

Portugal's forests in the 12th century were dominated by the Fagaceae represented by Quercus and Castanea, and several pine species.From the 12th century onwards, forests underwent changes in their management starting with protection and ultimately leading to intense exploitation. The massive naval construction during the maritime expansion(mainly in the 15th–16th centuries) involved felling of approximately 5 million trees mainly Quercus suber, Pinus pinea and other Quercus species. Cumulative fuel-wood consumption of 959 Mm3 during 1300–1854 was attributed to demographic expansion while the deforestation rate during 1636–1854 accounted for a minimum of 72.6% and a maximum of 96% of total forest cover. The volume of timber used in railway sleepers from 1856 onwards might have reached 0.5 Mm3. The last quarter of the 20th century increased the forest cover of Portugal through the World Bank program of Eucalyptus globulus reforestation.     

Migration and escapement of silver eel males,Anguilla anguilla,from a southwestern European river

The catadromous life cycle of the European eel encompasses a spawning migration to the Sargasso Sea. Prior to their migration, eels develop a silver coloration being referred to as “silver eels.” Due to the dramatic European eel recruitment decline, it is crucial to quantify silver eel escapement to evaluate the success of measures taken under Eel Management Plans (Regulation EC (1100/2007)). Thus, the percentage of silver eels escaping from the River Mondego (Portugal) was estimated during two consecutive spawning seasons (2014–2016) and their migratory behaviour was studied. Thirty-six male silver eels were tagged with acoustic transmitters and their downstream migration was tracked using automatic receivers deployed at four locations along the river course, from the first impassable obstacle up to the river mouth (67 km). Among the tagged eels, 15 (42%) escaped to the sea. In both years, individuals displayed faster migration speed in the downstream reaches of the river. BRT (“Boosted Regression Trees”) models were used to explain downstream migration and escapement of silver eels. The analyses revealed that the downstream migration is triggered by several environmental variables with water conductivity as the most influential predictor. Escapement of eels from the estuary occurred a few hours after their arrival and was primarily explained by the offshore wind intensity, which promotes a current in the coast that may favour their transport to the open sea. These findings contribute to a better understanding of silver eel migration in southern latitudes and highlight and reinforce the need to monitor spawner escapement.     

Modelling bryophyte distribution based on ecological information for extent of occurrence assessment

For some groups such as bryophytes, the IUCN distribution criteria are of critical importance to evaluate threat status, since other parameters cannot be determined readily. In this study, we propose the use of ecological niche modelling methods to estimate the extent of occurrence (EOO) of species. Herbarium (LISU) collection data are used to estimate the potential distribution of bryophytes based on three different methods: GARP, MAXENT and ENFA. The records of bibliographic references were projected against model predictions, and used for validation purposes using the receiver operating characteristic (ROC) method, as well as knowledge about ecological and geographic affinities.Four species (Antitrichia californica, Riccia sommieri, Cryphaea heteromalla and Racomitrium hespericum) were chosen as case studies; they were selected to represent taxa with contrasting ecological requirements, biogeographic importance and conservation value. The main difference between the two approaches (topological and ecological) for determining EOO is that the former only consider species distribution in space, whereas ecological methods may include both spatial distribution as well as environmental ranges. The methodological advance presented here explores the links between population distribution and environmental data, filling the gaps between distribution and administrative borders.     

Analysis of the distribution of endemic and rare arthropods in high endemism areas of Algarve-South Portugal

The study of several arthropod groups in high endemism areas (HEA) of Algarve, the Southernmost province of Portugal, has revealed endemic species and species not yet recorded for the Portuguese fauna. The list includes 3 species of Isopoda endemic to Algarve, to Portugal or to the Iberian Peninsula, 2 species new to Portugal and 2 species new to the Iberian Peninsula; 2 species of Pseudoscorpiones not yet cited to Portugal; 11 species of Pauropoda new to Portugal, including one new species probably endemic; 15 species of Collembola endemic to the Portuguese or to the Iberian Peninsula faunas (Gama et al. 1997) and 37 species and 5 subspecies of Staphylinidae endemic to Algarve.With the exception of Collembola, which have been studied by us, the remaining groups have been submitted for study to several specialists.These findings heighten the biological richness of these areas of high endemism in terms of conservation of biological diversity. The authors draw attention to the necessity to preserve or restore the biological value of these areas, encouraging the adoption of protective measures and the creation of research programmes that include the implementation of taxonomic studies and co-operation between taxonomists and ecologists in order to preserve the biodiversity of these areas.     

Higher taxa surrogates of spider (Araneae) diversity and their efficiency in conservation

A number of alternative approaches have been suggested during recent years to predict species richness of a given taxa, while retaining information on the identities of the observed individuals. Such information can be extremely useful for choosing conservation priority areas, either by using simple richness values or, preferentially, by considering the complementarity of potential sites. Among the most popular approaches is the use of higher taxa surrogates. Both family and genus richness are here tested in their ability to predict the number of spider (Araneae) species independently of sampling effort, geographical location and type of habitat. We use data from three Portuguese protected areas as a test case. Genus richness is considered a good surrogate of species richness, despite some caution being needed regarding the comparison of sites with considerably different sampling effort, the same not happening with families. Only genera are also found to be reliable either for ranking sites according to taxa richness or for determining near-minimum sets of sites for conservation. We therefore recommend surrogacy at this taxonomic level as a promising approach for the prediction of spider species richness or evaluation and ranking of areas according to their conservation importance. The reached conclusions should uphold for Portugal and the entire Mediterranean region.     

Rickettsia lusitaniae sp. nov. isolated from the soft tick Ornithodoros erraticus (Acarina: Argasidae)

In this study a novel Rickettsia from the spotted fever group, isolated from Ornithodoros erraticus soft ticks collected from pigpens in the south of Portugal, is described. After initial screening revealed Rickettsia-positive ticks, isolation attempts were then performed. Successful isolates were achieved by shell-vial technique using Vero E6 cells at 28 °C. Molecular characterization of the isolate was performed based on analysis of five rickettsial genes gltA, ompA, ompB, sca1 and htr with their subsequent concatenation along with other rickettsial species resulting in a clustering of the new isolate with Rickettsia felis and Rickettsia hoogstraalii. The degree of nucleotide sequence similarity with other rickettsiae fulfills the criteria for classification of our isolate as a novel species. The name Rickettsia lusitaniae sp. nov. (= CEVDI PoTiRo) is proposed for this new species found in O. erraticus.