Molecular identification of blast resistance genes in rice landraces from northeastern India

Rice blast disease caused by the fungus Magnaporthe oryzae is one of the most devastating diseases causing huge losses worldwide. In the present study, major blast resistance genes were investigated in landraces originating from northeastern India. Based on phenotypic evaluation, 288 landraces were classified into three distinct groups: resistant (75), moderately resistant (127) and susceptible (86). The genetic frequencies of the 18 major blast resistance genes were between 6.2% and 27.4%, with only two genotypes possessing a maximum of nine blast resistance genes. The cluster and population structure analysis grouped the landraces into two groups. Through principal coordinate analysis, the scatter plots partitioned the resistant and moderately resistant landraces into different groups. Analysis of molecular variance showed maximum (96%) diversity within populations and least (4%) diversity between populations. Association analysis identified six markers, CRG4_2, RM72, tk59-2, pi21_79-3, RM1233 and RM6648, that are significantly associated with blast disease and explained a phenotypic variance of 1.1–6.5%. The associated genes could be used in marker-assisted rice breeding programmes for gene pyramiding to develop rice varietal resistance against blast disease. The present study represents a valuable blast resistance genetic resource that could be used for identification of new R genes, donors for blast resistance, and genomic studies.     

Rice-residue biochar influences phosphorus availability in soil with contrasting P status

ABSTRACT

Thermo-chemical conversion of crop residues to produce biochar is an emerging strategy in the context of sustainable phosphorous (P) use and residue management. An incubation study for 90 d was conducted to investigate the effects of rice-residue biochar (0, 10, 20 and 40 g kg^?1) in combination with inorganic-P (KH₂PO₄) (0, 25 and 50 mg kg^?1) on phosphorous availability in medium- and high-P status soils. Increasing biochar addition rates alone or in combination with inorganic-P resulted in a significant increase in P pools, i.e. plant available P or Olsen-P (from 8 to 132 mg kg^?1 in medium-P and 15 to 160 mg kg^?1 in high-P soils), microbial biomass P and various mineral-bound inorganic-P fractions in the order (Ca-P > organic-P > Al-P > loosely held/soluble-P > Fe-P > reductant soluble-P). Further, lower phosphatase activity (19–50%) with increasing rates of biochar addition in both soils elucidates the ability of biochar to act as a long-term source of available P in the experimental soils. The results demonstrate that rice-residue biochar can directly or indirectly enhance the status of available P in soils and hence can be used as a beneficial amendment to meet the crop P demand.     

Metabolism mediated interaction of α-asarone and Acorus calamus with CYP3A4 and CYP2D6

The present study was aimed to investigate the possible interaction of the standardized extract of Acorus calamus (AC) with Cytochrome P450 enzyme, quantitative determination of the α-asarone in the AC rhizome was performed by RP-HPLC method. In vitro interaction of the plant extract was evaluated by CYP450-carbon monoxide complex (CYP450-CO) assay. Effect on individual isoforms such as CYP3A4 and CYP2D6 isozymes were analyzed through fluorescence product formation and respective IC₅₀ values were determined. CYP450-CO assay showed moderate interaction potential. Extract showed higher IC₅₀ values (46.84 ± 1.83-32.99 ± 2.21 μg/ml) comparing to the standard inhibitors and lower IC₅₀ value than α-asarone (65.16 ± 2.37-42.15 ± 2.45 μg/ml).     

Metroglyph analysis of Indian and exotic varieties of maize

Summary Metroglyph and index score analysis was carried out with 15 Indian and 15 exotic varieties of maize currently being used in the breeding programme of the Coordinated Maize Improvement Project at the Indian Agricultural Research Institute. It was found that the Indian varieties under study fall into three morphological complexes which differed among themselves. The variability pattern of the second and third Indian complexes resembled that of Mexican and Colombian germ plasm. The variability pattern of the Caribbean germ plasm was different from the Indian complexes. Index score analysis also gave similar results. Previous breeding experiments also confirmed the findings that these varieties might have originated from a few Mexican or Colombian introductions.     

Karyomorphological studies of ten strains of Indian mustard (Brassica juncea Coss.)

Summary Karyomorphological studies on ten cultivated strains of Brassica juncea Coss. (Indian mustard) have been made. All of them were found to possess 2n=36 chromosomes and meiotic studies revealed 18 regular bivalents. A great many structural differences between chromosome complements have been recorded. It has been shown that though homogeneous in gross morphology, minute structural differences between the strains are noted in relation to the number of secondary constrictions, the position of primary constrictions as well as the changes in the arm ratio. A histogram of the haploid chromatin complement of the somatic set of ten strains illustrates the differences.     

Molecular mapping of a locus controlling resistance to Albugo candida in Indian mustard

Brassica juncea (L.) Czern & Coss is widely grown as an oilseed crop in the Indian subcontinent. White rust disease caused by Albugo candida (Pers.) Kuntze is a serious disease of this crop causing considerable yield loss every year. The present study was undertaken to identify molecular markers for the locus controlling white rust resistance in a mustard accession, BEC‐144, using a set of 94 recombinant inbred lines (RILs). The screening of individual RILs using an isolate highly virulent on the popular Indian cultivar ‘Varuna’ revealed the presence of a major locus for rust resistance in BEC‐144. Based on screening of 186 decamer primers employing bulked segregant analysis (BSA), 11 random amplified polymorphic DNA markers were identified, which distinguished the parental lines and the bulks. Five of these markers showed linkage with the rust resistance locus. Two markers, OPN0_l000 and OPB06₁₀₀₀, were linked in coupling and repulsion phases at 9.9 cM and 5.5 cM, respectively, on either side of the locus. The presence of only two double recombinants in a population of 94 RILs suggested that the simultaneous use of both markers would ensure efficient transfer of the target gene in mustard breeding programmes.     

Does white wine qualify for French paradox? Comparison of the cardioprotective effects of red and white wines and their constituents: resveratrol, tyrosol, and hydroxytyrosol

It is generally believed that the French paradox is related to the consumption of red wine and not other varieties of wine, including white wine or champagne. Some recent studies have indicated that white wine could also be as cardioprotective as red wine. The present investigation compares the cardioprotective abilities of red wine, white wine, and their principal cardioprotective constituents. Different groups of rats were gavaged with red wine, white wine, resveratrol, tyrosol, and hydroxytyrosol. Red wine and its constituent resveratrol and white wine and its constituents tyrosol and hydroxytyrosol all showed different degrees of cardioprotection as evidenced by their abilities to improve postischemic ventricular performance, reduce myocardial infarct size and cardiomyocyte apoptosis, and reduce peroxide formation. It was discovered in this study that although each of the wines and their components increased the enzymatic activities of the mitochondrial complex (I-IV) and citrate synthase, which play very important roles in oxidative phosphorylation and ATP synthesis, some of the groups were more complex-specific in inducing the activity compared to the other groups. Cardioprotective ability was further confirmed by increased expression of phospho-Akt, Bcl-2, eNOS, iNOS, COX-1, COX-2, Trx-1, Trx-2, and HO-1. The results of this study suggest that white wine can provide cardioprotection similar to red wine if it is rich in tyrosol and hydroxytyrosol.     

An update of the mercury inventory and atmospheric mercury fluxes to and from Finland

Finland, the northern-most agricultural/industrial country in the world, has been for some time steadily improving environmental mercury (Hg) research. This paper focuses upon Hg recovery during zinc production, uses of Hg, updating of information on Hg emissions and atmospheric transport of Hg to and from Finland. The recovery of Hg as a by-product of zinc production began in 1970. The highest amount of recovered Hg was noted to be 160 t in 1989. Total uses of Hg in different sectors were about 7.4 t in 1992, which had decreased by 50% since the year 1987. In 1992, the estimated Hg emission to air was 2 t yr^?1, whereas to water and land the emission was about 0.20 and 3.67 t yr^?1, respectively. Natural Hg emission in Finland was estimated to be about 0.4 t yr^?1 (range: 0.3 to 0.5 t yr^?1). In addition, an initial attempt was made to estimate the atmospheric Hg flux to and from Finland; these values were noted to be 2.7 and 2.1 t yr^?1, respectively.     

High-yield preparation of wax esters via lipase-catalyzed esterification using fatty acids and alcohols from crambe and camelina oils

Fatty acids obtained from seed oils of crambe (Crambe abyssinica) and camelina (Camelina sativa) via alkaline saponification or steam splitting were esterified using lipases as biocatalysts with oleyl alcohol and the alcohols derived from crambe and camelina oils via hydrogenolysis of their methyl esters. Long-chain wax esters were thus obtained in high yields when Novozym 435 (immobilized lipase B from Candida antarctica) and papaya (Carica papaya) latex lipase were used as biocatalysts and vacuum was applied to remove the water formed. The highest conversions to wax esters were obtained with Novozym 435 (> or =95%) after 4-6 h of reaction, whereas with papaya latex lipase such a high degree of conversion was attained after 24 h. Products obtained from stoichiometric amounts of substrates were almost exclusively (>95%) composed of wax esters having compositions approaching that of jojoba (Simmondsia chinensis) oil, especially when crambe fatty acids in combination with camelina alcohols or camelina fatty acids in combination with crambe alcohols were used as substrates.     

Induction of an enzyme in genetically deficient rats after grafting of normal liver

Tissue from normal rat livers was grafted onto the livers of rats that were genetically deficient in bilirubin uridine diphosphate glucuronyltransferase activity. Twelve weeks after the grafting operation, the liver of the recipient rats had bilirubin uridine diphosphate glucuronyltransferase activity.