Biological filtration properties of selected herbs in an aquaponic system

This study was conducted to determine the biological filtration capabilities of some culinary herbs co‐cultured with lemon fin barb hybrid in a nutrient film technique (NFT) recirculating aquaponic system. Lemon fin barb hybrid (Hypsibarbus wetmorei ♂ × Barbonymus gonionotus ♀) fingerlings were stocked in twelve 2‐tonne fibreglass tanks at 25 fish per tank and co‐cultured with Chinese celery (Apium graveolens var. secalinum Alef.), coriander (Coriandrum sativum) and peppermint (Mentha × piperita) for seven weeks. The impacts of the waste generated by the fish on the water quality, the filtration capability of the herbs and the ability of fish and herbs to retain nutrients (NPK) were also estimated. All the herbs showed water purifying potentials to varying degrees as significantly lower levels of nitrogenous compounds (NH₃‐N, NO₃‐N, NO₂‐N) were observed after the herbal filtration. The plant growth seemed to be affected by their ability to absorb nutrients and consequently purify the culture medium. Interestingly, the lemon fin barb hybrid also showed significant differences in terms of weight gain, but the nutrient retention among fish treatments was not statistically different. The plants absorbed less phosphorus and potassium than the fish. After computing for the total system percentage of NPK recovered, nitrogen was the most retained nutrient. The peppermint showed superiority in terms of gross biomass and water purifying potential compared to the Chinese celery and coriander.     

Recent update on the prevalence of Vibrio species among cultured grouper in Peninsular Malaysia

Vibrio infections are common among marine fish and lead to serious problems in the aquaculture sector. This study reports a recent occurrence of Vibrio species (spp.) isolated from cultured groupers in Peninsular Malaysia using the gyrB and pyrH genes. A total of 147 Vibrio strains were successfully isolated from 77 (64%) groupers using culture method and subjected to gyrB and pyrH sequencing for species identification and confirmation. Results showed that 89% of Vibrio strains were identified and clustered to six groups of Vibrio spp., while 11% were not clustered to any Vibrio spp. using the gyrB sequences. Meanwhile, by analysis of the pyrH sequences all the 147 Vibrio strains (100%) were successfully identified and clustered into 11 groups of Vibrio spp., including the gyrB non‐identified strains. The pyrH gene provides a better resolution for identification of Vibrio spp. compared with the gyrB gene. Thus, the pyrH gene was more suitable for a rapid determination of Vibrio spp. distribution in Peninsular Malaysia. Using the pyrH gene, our study found higher prevalence of Vibrio vulnificus (33%), V. alginolyticus (24%) and V. parahaemolyticus (22%), followed by V. rotiferianus (5%), V. harveyi (3%), V. tubiashii (2%), V. campbellii (2%), V. ponticus (1%), V. diabolicus (1%), V. owensii (1%) and others Vibrio sp. (7%). Thus, the results of this study revealed that the occurrence of pathogenic vibrios among grouper fish is still high in Malaysian aquaculture. In addition, the pyrH gene was proved as a suitable marker for rapid identification of Vibrio species compared with the gyrB gene.     

Pantoea: a newly identified causative agent for leaf blight disease in rice

Journal of Plant Diseases and Protection - Leaf blight is one of the most serious threats to rice agroecosystems worldwide, and the yield reduction due to this disease can be as high as 70%. For...     

Comparative genome analysis reveals a distinct influence of nucleotide composition on virus–host species‐specific interaction of prawn‐infecting nodavirus

Discovery of species‐specific interaction between the host and virus has drawn the interest of many researchers to study the evolution of the newly emerged virus. Comparative genome analysis provides insights of the virus functional genome evolution and the underlying mechanisms of virus–host interactions. The analysis of nucleotide composition signified the evolution of nodavirus towards host specialization in a host‐specific mutation manner. GC‐rich genome of betanodavirus was significantly deficient in UpA and UpU dinucleotides composition, whilst the AU‐rich genome of gammanodavirus was deficient in CpG dinucleotide. The capsid of MrNV and PvNV of gammanodavirus retains the highest abundance of adenine and uracil at the second codon position, respectively, which were found to be very distinctive from the other genera. ENC‐GC3 plot inferred the influence of natural selection and mutational pressure in shaping the evolution of MrNV RdRp and capsid, respectively. Furthermore, CAI/eCAI analysis predicts a comparable adaptability of MrNV in squid, Sepia officinalis than its natural host, Macrobrachium rosenbergii. Thus, further study is warranted to investigate the capacity of MrNV replication in S. officinalis owing to its high codon adaptation index.     

Assessment of prebiotic potentials in selected leaf meals of high dietary fibre on growth performance,body composition,nutrient utilization and amylase activities of a tropical commercial carp fingerlings

The performance of selected leaf meals of high dietary fibre in the feed of a tropical commercial carp, hybrid lemon fin barb (Barbonymus gonionotus ♀ × Hypsibarbus wetmorei ♂) was evaluated in a 56‐day feeding trial. The tropical carp juveniles (9.43 ± 0.05 g) were randomly stocked in 60‐L aquaria at 15 fish per aquarium. Five isonitrogenous and isocaloric diets (30% crude protein, 17 kJ/g gross energy) containing no leaf meal and 10% napier grass (Pennisetum purpureum), alfalfa (Medicago sativa), water spinach (Ipomea aquatica) and Gliricidia sepium leaf meals were formulated and tested. Three aquaria were randomly assigned to each experimental diet. The results showed that fish‐fed diets containing leaf meals showed superior growth performance and body composition which was better than those fed control diet. The leaf meal‐treated groups also had higher values of protein, lipid, energy retention and production of digestive enzymes amylase. Conclusively, the results indicated that leaf meal fibre provided better performance showing the inherent prebiotic effect of the utilization of these leaf meal in hybrid lemon fin barb .     

Anti-inflammatory activities of cucurbitacin E isolated from Citrullus lanatus var. citroides: role of reactive nitrogen species and cyclooxygenase enzyme inhibition

The in vivo and in vitro mechanistic anti-inflammatory actions of cucurbitacin E (CE) (Citrullus lanatus var. citroides) were examined. The results showed that LPS/INF-γ increased NO production in RAW264.7 macrophages, whereas L-NAME and CE curtailed it. CE did not reveal any cytotoxicity on RAW264.7 and WRL-68 cells. CE inhibited both COX enzymes with more selectivity toward COX-2. Intraperitoneal injection of CE significantly suppressed carrageenan-induced rat's paw edema. ORAC and FRAP assays showed that CE is not a potent ROS scavenger. It could be concluded that CE is potentially useful in treating inflammation through the inhibition of COX and RNS but not ROS.     

Effect of fertilizer and endomycorrhizal inoculum on growth and nutrient uptake of cocoa (Theobroma cacao L.) seedlings

Summary A greenhouse experiment was carried out to evaluate the influence of vesicular-arbuscular mycorrhiza (VAM) on growth and nutrient uptake of cocoa seedlings treated with five levels of palm oil mill effluent, in an unsterilized Oxisol and an Ultisol, either with or without addition of the VAM fungus Scutellospora calospora (Nicol. & Gred.) Walker and Sanders. Inoculation with the VAM fungi significantly increased nutrient uptake and plant growth in both soils. The dry matter yield, and the tissue N and K concentration in the plant tops increased significantly with increasing levels of palm oil mill effluent applied to both the Oxisol and the Ultisol. The maximum tissue P concentration, however, was obtained from plants grown in the Ultisol that was given 50.0 g palm oil mill effluent per kg while the maximum P recovery of 26% was obtained from plants given only 16.7 g effluent per kg. Overall, the percentage of P recovery decreased with the addition of increasing levels of palm oil mill effluent. In the Oxisol, the tissue P concentration increased with the addition of increasing levels of palm oil mill effluent, but the maximum recovery of P was recorded from plants given only 0.3 g effluent per kg. The percentage P recovery decreased with subsequent additions of the effluent.     

Soil urease activity and kinetics

The activity and kinetic properties of urease in several Malaysian soils were examined. The values for K_m and V_max of the soils computed according to the Hanes equation were in general agreement with other reports as far as magnitudes were concerned. A significant correlation between K_m and V_max was also obtained. The urease activity of the soils was variable, and it was noted that expression of the activity as the time required to hydrolyze half of the applied urea has limited use in soils of low activity. In all soils studied, inhibition of urease activity was effectively achieved using Ag⁺, while Cu²⁺ was only effective in two soils, and marginally effective in the other two soils. Urease inhibitors have potential applications in reducing volatilization losses of ammonia derived from urea applied to soils.     

Amino Acid Composition of Developing Larval Freshwater Prawn Macrobrachium rosenbergii

Abstract.— Amino acid profiles of freshwater prawn Macrobrachium rosenbergii were determined during early larval stages (I-IX) to provide some baseline biochemical information of the growing larvae. The larvae obtained from several females were stocked into three 250-L tanks at a density of 30 larvae/L. The feeding regime consisted of newly hatched Artemia nauplii and egg custard containing 5% cod liver oil. For each developmental stage, larval samples from each experimental tank were pooled, freeze dried and after acid hydrolysis, the quantification of amino acids was done by a reverse phase high performance liquid chromatography ( N = 2). The highest represented of the total amino acids were for glutamic acid and phenylalanine (with cystine) with ranges from 13.4–16.6 and 9.7–11.5%, respectively, whereas tryptophan (1.4–1.6%). methionine (1.4–2.7%) and histidine (2.9–4.2%) were relatively lower. The levels of the following essential amino acids did not significantly change during larval development: arginine, leucine, phenylalanine (plus cystine), threonine, tryptophan and valine. Despite statistically significant changes that were observed in levels of some amino acids, amino acid composition appeared to be relatively unchanged during the larval growth. The results may suggest that the amino acid requirements of the freshwater prawn is relatively constant during larval life and can be satistied by a suitable protein source that resembles the larval amino acid profile.