Impact of foot-and-mouth disease on mastitis and culling on a large-scale dairy farm in Kenya

Foot and mouth disease (FMD) is a highly transmissible viral infection of cloven hooved animals associated with severe economic losses when introduced into FMD-free countries. Information on the impact of the disease in FMDV-endemic countries is poorly characterised yet essential for the prioritisation of scarce resources for disease control programmes. A FMD (virus serotype SAT2) outbreak on a large-scale dairy farm in Nakuru County, Kenya provided an opportunity to evaluate the impact of FMD on clinical mastitis and culling rate. A cohort approach followed animals over a 12-month period after the commencement of the outbreak. For culling, all animals were included; for mastitis, those over 18 months of age. FMD was recorded in 400/644 cattle over a 29-day period. During the follow-up period 76 animals were culled or died whilst in the over 18 month old cohort 63 developed clinical mastitis. Hazard ratios (HR) were generated using Cox regression accounting for non-proportional hazards by inclusion of time-varying effects. Univariable analysis showed FMD cases were culled sooner but there was no effect on clinical mastitis. After adjusting for possible confounders and inclusion of time-varying effects there was weak evidence to support an effect of FMD on culling (HR = 1.7, 95% confidence intervals [CI] 0.88-3.1, P = 0.12). For mastitis, there was stronger evidence of an increased rate in the first month after the onset of the outbreak (HR = 2.9, 95%CI 0.97-8.9, P = 0.057).

Electronic supplementary material

The online version of this article (doi:10.1186/s13567-015-0173-4) contains supplementary material, which is available to authorized users.     

Liquid chromatographic determination of sulfamethazine in feeds

A reverse-phase liquid chromatographic method for the assay of sulfamethazine (SMZ) in feeds is described. Feed samples are extracted with 50% methanol solution, centrifuged, filtered, and diluted when necessary, and chromatographed on a C-18 column. Samples are eluted with a mobile phase of 20% methanol and 80% of a solution containing acetic acid and tetramethylammonium chloride. The average recovery from spiked samples was 97.2% with a coefficient of variation of 1.2%. Linearity was very good (correlation coefficient 0.9997). Within-day and between-day coefficients of variation averaged 1.3 and 2.6%, respectively. The results for samples assayed by this method compared closely with the results from the same extracts assayed by the AOAC colorimetric method.     

Use of a substrate/alliinase combination to generate antifungal activity in situ

Allicin, an active ingredient of garlic, possesses a range of antimicrobial properties. Unfortunately, certain properties of the compound, such as chemical instability and low miscibility with water, have hampered its practical use in the past. Here, we show that it is possible to use a binary system consisting of the plant enzyme alliinase and its substrate alliin to generate allicin, and hence antifungal activity, in situ. During application, the two inactive components generate compounds that inhibit growth and infection-related development of the rice blast fungus Magnaporthe grisea. It is therefore possible to "trigger" biological activity in a controlled, yet effective manner. Apart from circumventing many of the drawbacks of allicin, this binary system has additional important advantages, such as low toxicity of its individual components and selective activation. Importantly, alliinase is also able to use different substrates, therefore paving the way to a range of novel, binary antimicrobial systems with custom-made chemical and biochemical properties.     

Performance of Pacific White Shrimp,Litopenaeus vannamei,Reared in Zero‐Exchange Tank Systems Exposed to Different Light Sources and Intensities

The development of biofloc production technology has generated significant commercial and research interest directed toward the inland culture of Pacific white shrimp, Litopenaeus vannamei. Most work to date has been conducted in greenhouses, where photoautotrophic organisms are significant contributors to system functionality. In more temperate locations, operations in insulated buildings would reduce heating costs. This experiment was designed to evaluate the effect of light on shrimp cultured in intensive biofloc systems. A 92‐d experiment was conducted in 3.8‐m³ tanks. There were five light treatments: (1) natural sunlight (SUN) as a control (midday: 718 lx); (2) one metal halide light (MHL) (1074 lx); (3) one fluorescent light (1FL) (214 lx); (4) two fluorescent lights (2FL) (428 lx); and (5) three fluorescent lights (3FL) (642 lx). Artificial light treatments operated on a 12:12 daily cycle. There were three replicate tanks per treatment and each was separated by black plastic to prevent light transmission between replicates. Each tank was stocked at 465 shrimp/m² of tank bottom (initial mean weight = 0.4 g). Light treatment had a significant (P≤ 0.05) impact on average individual weight, survival, harvest yield (kg/m²), and feed conversion ratio (FCR). Harvest yield and survival among shrimp in the SUN, MHL, and 1FL treatments were not significantly different. However, there was an inverse linear relationship (P≤ 0.05; R² = 0.76) between the number of fluorescent fixtures and survival, which was related to greater concentrations of filamentous bacteria as the intensity of fluorescent light increased, causing gill fouling. Natural light and MHL did not result in high concentrations of filamentous bacteria. These results indicate that natural light, metal halide lighting, and/or relatively low levels of fluorescent lighting are suitable for indoor production of Pacific white shrimp in biofloc systems. Light spectrum and intensity can affect bacterial community structure, which has a profound effect on shrimp survival and production.     

Conversion of native forest to exotic Pinus radiata plantation: Response of understorey plant composition using a plant functional trait approach

This study aimed to determine the response of native plant species to changed growing conditions, especially increased shade, following establishment of exotic Pinus radiata plantation on cleared native eucalypt forest. In the Northern Hemisphere, species tolerant to shading are typically herbaceous perennials, with large seeds, no obvious mechanism of seed dispersal, and spread by clonal means. We investigated whether life form, mode of seed dispersal, leaf area, specific leaf area (SLA), nutrient uptake strategy, seed mass, fire response, plant height, and clonal spread differed between understorey species of pine plantation and native forest. Further, we asked whether plant functional traits that confer tolerance to stress through shading differ from those in other floras. The study was conducted on the Delatite Peninsula in north-eastern Victoria, Australia. Vegetation of adjacent native forest and pine plantation were surveyed using eight 7 m × 7 m plots per site, randomly located within five paired sites. Differences in plant traits between land-use types were tested by Non-metric Multi-dimensional Scaling (NMDS), analysis of similarity (ANOSIM) and paired t-tests. Cluster analysis of the nine plant traits was used to define emergent groups, with differences between land-use types examined by ANOSIM and indicator species analysis. There was a significant change in the composition of understorey vegetation following conversion to pine plantation that included a decline in the richness of native species. NMDS of plant attributes showed a clear separation of native forest from pine plantation with land use strongly correlated in ordination space (r² = 0.611). Cluster analysis produced seven emergent groups of plant functional traits for 78 identified plant species. Phanerophytes split into two groups (myrmecochorous trees and shrubs; myrmecochorous shrubs), perennial herbs into four groups (upright herbs, myrmecochorous herbs, barochorous herbs, flat rosette herbs) with one group representing therophytes and anemochorous perennials. Perennial herbs with intermediate SLA and clonal spread were tolerant of the shaded conditions in pine plantation while the two groups of phanerophytes and the myrmecochorous herbs were largely excluded. Shared traits of excluded emergent groups included those that provided an over-riding adaptation to mineral nutrient stress, including myrmecochory, low SLA, ectomycorrhizal and ericoid mycorrhizal associations and N₂-fixation. These plant traits could not provide tolerance to stress through shading, which is better explained by the open canopied nature of the native forest.