Temporal and spatial progress of the diseases caused by the crinivirus tomato chlorosis virus and the begomovirus tomato severe rugose virus in tomatoes in Brazil

Efficient management of whitefly-borne diseases remains a challenge due to the lack of a comprehensive understanding of their epidemiology, particularly of the diseases tomato golden mosaic and tomato yellowing. Here, by monitoring 16 plots in four commercial fields, the temporal and spatial distribution of these two diseases were studied in tomato fields in Brazil. In the experimental plots these diseases were caused by tomato severe rugose virus (ToSRV) and tomato chlorosis virus (ToCV), respectively. The incidence of each virus was similar in the plots within a field but varied greatly among fields. Plants with symptoms for both diseases were randomly distributed in three of four spatial analyses. The curves representing the progress of both diseases were similar and contained small fluctuations, indicating that the spread of both viruses was similar under field conditions. In transmission experiments of ToSRV and ToCV by Bemisia tabaci MEAM1 (former biotype B), these viruses had a similar transmission rate in single or mixed infections. It was then shown that primary and secondary spread of ToCV were not efficiently controlled by insecticide applications. Finally, in a typical monomolecular model of disease progress, simulation of the primary dissemination of ToSRV and ToCV showed that infected plants were predominantly randomly distributed. It is concluded that, although the manner of vector transmission differs between ToSRV (persistent) and ToCV (semipersistent), the main dispersal mechanisms are most probably similar for these two diseases: primary spread is the predominant mechanism, and epidemics of these diseases have been caused by several influxes of viruliferous whiteflies.     

Design and field evaluation of a ground robot for high-throughput phenotyping of energy sorghum

Precision Agriculture - This article describes the design and field evaluation of a low-cost, high-throughput phenotyping robot for energy sorghum for use in biofuel production. High-throughput...     

Evidence of sedimentation inequality along riparian areas colonised by Impatiens glandulifera (Himalayan balsam)

Soil loss from riparian areas supporting the annual invasive weed, Impatiens glandulifera (Himalayan balsam), was measured and compared with equivalent values recorded at nearby, topographically similar areas supporting perennial vegetation over a cumulative seven-year period, along sections of two separate river systems; one in Switzerland, and one in the UK. Soil loss from colonised locations was significantly greater than from reference locations in four of the seven measurement periods. Despite contrasting results, standard deviations, based on soil losses and gains, were predominantly higher for colonised areas at both rivers over most monitoring periods. These findings indicated that areas colonised by Himalayan balsam experience higher sediment flux in comparison with areas free of invasion. Here, we test those original interpretations by reinterrogating the datasets using a more robust analysis of inequality. Nine datasets were tested, five of which (i.e. 56%) showed that sediment flux was significantly greater at Himalayan balsam-invaded areas than at reference areas. Three datasets showed no difference in sediment flux between invaded and reference areas (33%), and one (11%) showed higher sediment flux at reference areas. Most results uphold our original interpretations and support our hypothesis that hydrochory probably dictates where colonisation initially occurs, by depositing Himalayan balsam seeds in slack or depressional areas along river margins. Once Himalayan balsam becomes established and sufficient perennial vegetation is displaced, seasonal die-off and depleted vegetation cover may increase the risk that some areas will experience significantly higher sediment flux.     

Correction to: Individual based modelling of fish migration in a 2-D river system: model description and case study

Landscape Ecology - In the original publication of the article, the third author name has been misspelt. The correct name is given in this Correction. The original version of this article was revised.     

Direct quantitative real‐time PCR assay for detection of the emerging pathogen Neonectria neomacrospora

The epidemic outbreak in northern Europe of Neonectria neomacrospora, the causal agent of dieback in Abies spp., led the European and Mediterranean Plant Protection Organization (EPPO) to include the pathogen on its alert list in 2017. Effective monitoring of this pathogen calls for a rapid and sensitive method of identification and quantification. A probe‐based real‐time PCR (qPCR) assay based on the β‐tubulin gene was developed for the detection and quantification of N. neomacrospora in infected wood samples, and directly for ascospores. This study presents the first published species–specific molecular detection assay for N. neomacrospora. The analytical specificity was validated on taxonomically closely related fungal species as well as on 18 fungal species associated with the host (Abies sp.). The analytical sensitivity was tested on naturally infected wood, on purified pathogen DNA in a matrix of host DNA and on N. neomacrospora ascospores for detection of airborne inoculum. The latter was tested both with a DNA extraction step prior to qPCR and without DNA extraction by direct qPCR on collected ascospores. The assay was specific to N. neomacrospora, with a sensitivity of 130 fg purified DNA, or 10 ascospores by direct qPCR. Omitting DNA extraction and amplifying directly on unpurified ascospores improved assay sensitivity significantly.     

Utilization of electron beam irradiated Jatropha kernel meal in the diet of Labeo rohita (Hamilton, 1822) fingerlings

Defatted Jatropha kernel meal (DJKM) was irradiated through electron beam radiation at 25 kGy (IJKM). After irradiation, PEs and phytate were decreased by 36.67% and 55.27%, respectively, with slight reduction in total hydrolysed amino acids in IJKM. A 45‐day feeding trial was conducted to evaluate the utilization of irradiated Jatropha kernel meal (IJKM) in the diet of rohu (Labeo rohita) fingerlings. Five isonitrogenous (300 g/kg CP) and isoenergetic (15 MJ/kg GE) diets such as T0 (control, without IJKM), T5 (50 g/kg IJKM), T10 (100 g/kg IJKM), T15 (150 g/kg IJKM) and T20 (200 g/kg IJKM) were prepared and fed to fish of respective treatments. Fish fed diets containing T15 and T20 groups exhibited significantly lower (p < .05) weight gain, FCE, PER, ANPU, HSI, ISI, survival rate, nutrient and energy digestibility, than the other groups. Fish of higher IJKM fed groups (T15 and T20) also showed lower muscle moisture, protein, ash and higher muscle lipid content. The liver catalase and SOD activities significantly decreased in the higher IJKM fed groups. It is concluded that IJKM (irradiated by 25 kGy electron beam) can be incorporated up to 100 g/kg in carp feed with the replacement of 33% soybean meal and 28% ground nut oil cake without compromising growth performances of Labeo rohita.     

新麦草种子产量与繁殖性状的关联性分析

为了解新麦草的种子产量及繁殖性状间的关系，对27份新麦草种质资源的单株种子产量与7个产量性状的关联性进行了分析。结果表明，新麦草的单株生殖枝数、穗轴节数、单穗小花数和千粒重与单株种子产量关联最密切，其相关性表现为单株生殖枝数＞千粒重＞穗轴节数＞单穗小花数。经通径分析，单株生殖枝数（X₁）对单株种子产量（Y）直接效应最大，其余依次是单穗小花数（X₄）、单穗小穗数（X₃）、千粒重（X₇）、穗轴节数（X₂）和单穗结实种子数（X₅），其中单穗结实种子数和结实率对种子产量均表现为负效应，且未达到显著水平。经逐步回归分析得到回归方程Y= -9.880 2+0.27X₁+0.012X₄+2.011 1X₇（R=0.805 8，P<0.001），说明提高单株生殖枝数、千粒重、单穗小花数对新麦草增产的贡献最大，增加结实率也可间接提高新麦草的单株种子产量。     

Roles of water quality and disinfectant application on inactivation of fish pathogenic Streptococcus agalactiae with povidone iodine,quaternary ammonium compounds and glutaraldehyde

Streptococcosis is an important bacterial disease in Nile tilapia causing severe economic losses to tilapia aquaculture worldwide. The effects of water quality (low‐ [LS] and high‐level [HS] soiling, to mimic clean or dirty surface conditions and temperatures) and disinfectant application (diluted concentrations and exposure time) were characterized on the inactivation of Streptococcus agalactiae isolated from diseased tilapia. Five isolates were tested against three commercial disinfectant products with the main ingredients being povidone iodine (Anidine 100?; AD), benzalkonium chloride (Better BKC 80%?; BKC 80), and a mixture of quaternary ammonium compounds and glutaraldehyde (Chloraldehyde?; CR). CR demonstrated highest efficacy to S. agalactiae inactivation, followed by BKC 80 and AD, respectively. Higher‐level soiling, low temperature, diluted concentrations and short exposure time all decreased the disinfectant efficacy. CR and BKC 80 provided more than 5‐log inactivation at 1‐min exposure at 20°C under HS conditions, and also with ten‐fold‐diluted concentrations at 60‐min exposure time at 30°C. However, AD required 10‐min exposure to effectively remove bacteria under LS conditions at 30°C. The results could facilitate aquaculture management planning that leads to operating cost reductions and improvements in biosecurity.     

Impact of sulfur fertilization on distribution of sulfur fractions and use efficiency in blackgram in subtropical acidic soil of Assam,India

A field experiment was conducted to assess the effect of sulfur (S) fertilization on distribution of S in soil and use efficiency on blackgram in subtropical Inceptisol of acidic soil of Assam, India. Five levels of S were applied (0, 10, 20, 30 and 40 kg S ha^?1) along with recommended dose of nitrogen, phosphorus and potassium. Available S content gradually decreased with the advancement of crop growth stages and lowest value was observed at 60 DAS. Different S fractions were found to increase with increasing levels of S application and 40 kg S ha^?1 resulted the highest content for all S fractions. The grain and stover yield of blackgram increased significantly up to 20 kg S ha^?1 which was 95.69% higher over control. Agronomic efficiency, apparent S recovery and recovery efficiency of S were higher at 10 kg S ha^?1and found decreased with increase in level of S.