Changing how we approach fisheries: A first attempt at an operational framework for ecosystem approaches to fisheries management

The increasing need to account for the many factors that influence fish population dynamics, particularly those external to the population, has led to repeated calls for an ecosystem approach to fisheries management (EAFM). Yet systematically and clearly addressing these factors, and hence implementing EAFM, has suffered from a lack of clear operational guidance. Here, we propose 13 main factors (shift in location, migration route or timing, overfishing (three types), decrease in physiology, increase in predation, increase in competition, decrease in prey availability, increase in disease or parasites and a decline in habitat quality or habitat quantity) that can negatively influence fish populations via mechanisms readily observable in ~20 population features. Using these features as part of a diagnostic framework, we develop flow charts that link probable mechanism(s) underlying population change to the most judicious management actions. We then apply the framework for example case studies that have well‐known and documented population dynamics. To our knowledge, this is the first attempt to provide a clearly defined matrix of all the probable responses to the most common factors influencing fish populations, and to examine possible diagnostics simultaneously, comparatively and relatively in an attempt to elucidate the most probable mechanisms responsible. The framework we propose aims to operationalize EAFM, thereby not only better diagnosing factors influencing fish populations, but also suggesting the most appropriate management interventions, and ultimately leading to improved fisheries. We assert the framework proposed should result in both better use of limited analytical and observational resources and more tailored and effective management actions.     

Equal performance of TaqMan, MGB, molecular beacon, and SYBR green-based detection assays in detection and quantification of roundup ready soybean

We have tested and compared the performance of 12 different assays representing four different real-time polymerase chain reaction (PCR) chemistries in the context of genetically modified organism detection. Several different molecular beacon, SYBR Green, TaqMan, and MGB assays were designed for the event specific detection and quantification of the 3' integration junction of GTS 40-3-2 (Roundup Ready) soybean. Sensitivity as well as robustness in the presence of background DNA were tested. None of the PCR-based approaches appeared to be significantly better than any of the other, but the molecular beacon assays had the lowest efficiency and also seemed more sensitive to changes in experimental setup.     

Selectivity in a trawl codend during haul-back operation—An overlooked phenomenon

The selectivity of a 99 mm trawl codend was assessed using a codend cover fitted with a MultiSampler, which was acoustically triggered to take separate samples at three different phases of the haul. The first sample was collected during towing, the second during haul-up and the third at the surface. A total of 18 hauls were conducted with a commercial fishing vessel west of Scotland. It was demonstrated that escapes take place not only during the tow but also in the short period when the trawl is hauled back from the seabed and when the codend is at the surface. For haddock (Melanogrammus aeglefinus), whiting (Merlangius merlangus) and Norway lobster (Nephrops norvegicus), respectively, the mean percentages escaping at the surface were 16, 12 and 38% of the total escape while 17, 8 and 28% escaped during the haul-up phase. Compared to towing, the escape rate (no./min) increased for haddock by a factor 2.7 during haul-up and by a factor 1.7 at the surface, whereas the escape rates of whiting were similar for the three phases. The escape rate of Norway lobster increased by a factor of approximately 7 for both the haul-up and surface phases, compared to the towing phase. The selectivity parameters L50 (50% retention length) and SR (selection range = L75–L25) were estimated and compared for the three different phases and for the whole haul for haddock, whiting and Norway lobster. For all three species there was no significant (P > 0.05) difference in L50 between the three phases of the haul. There was also no significant difference for whiting and Norway lobster when comparing the SR of the three phases, whereas the SR was significantly lower for haddock when comparing the surface phase with towing and haul-up. The estimate of L50 when towing was about 6 cm lower for haddock and whiting and 9 mm for Norway lobster compared to the selection curve estimated conventionally for the whole haul. Finally, the effect of sea state, duration and codend catch on the selectivity parameters were estimated for the individual phases and for the whole haul. A significant effect of at least one variable was found in all phases.     

Artemia enriched with high n-3 HUFA may give a large improvement in performance of Atlantic halibut (Hippoglossus hippoglossus L.) larvae

Atlantic halibut larvae were fed Artemia enriched with two different oil emulsions (cod liver oil and 2050TG) from first feeding to 70 days after first-feeding (dpff). Larvae fed 2050TG enriched Artemia had better growth, survival and eye migration than larvae fed the cod liver oil enriched Artemia, while pigmentation rate was similar in the two groups. In addition to the difference in fatty acids, the two emulsions differed in lipid class composition, since 2050TG is a synthetic oil and a mixture of mono-, di- and tri-acylglycerol, while cod liver oil is a tri-acylglycerol. Total lipid level, estimated as fatty acid methyl esters (FAME) was similar in the two Artemia types, but sum of n-6 and n-3 fatty acids, arachidonic acid (20:4n-6, ARA), docosahexaenoic acid (22:6n-3, DHA) and eicosapentaenoic acid (20:5n-3, EPA) were higher in Artemia enriched with 2050TG than in the cod liver oil enriched Artemia. However, the main difference in fatty acid composition in the larvae, was a higher DHA (% of total fatty acids) in 2050TG larvae than in cod liver oil larvae. The lipid level measured as FAME was up to four times higher in the 2050TG larvae than in the cod liver oil larvae, and the reason for this may have been a better bioavailability of the partly digested lipid in the 2050TG emulsion. The correlation between a high level of lipid in the larval tissues (e.g. high energy status) and improved eye migration in larvae fed the 2050TG enriched Artemia supports the hypothesis that energy limitation on the larval stage may be a cause of the impaired eye migration commonly observed in farmed Atlantic halibut juveniles.     

Spin-liquid ground state of the S = 1/2 kagome Heisenberg antiferromagnet

We use the density matrix renormalization group to perform accurate calculations of the ground state of the nearest-neighbor quantum spin S = 1/2 Heisenberg antiferromagnet on the kagome lattice. We study this model on numerous long cylinders with circumferences up to 12 lattice spacings. Through a combination of very-low-energy and small finite-size effects, our results provide strong evidence that, for the infinite two-dimensional system, the ground state of this model is a fully gapped spin liquid.     

A simple and inexpensive spawning and egg collection system for fish with pelagic eggs

A spawning and egg collecting system for fish with pelagic eggs is described and discussed. The spawning unit is a 175 m³ submersible plastic pen supported by a polyethylene floating collar. The eggs are collected by rotating the water column in the pen and placing a net in the rotating water. The system is inexpensive and easy to operate. Temperature and illumination control are feasible.The quantity collected in the 1981 spawning season was 138 million eggs. Obtained eggs were of good quality. The theoretical spawning potential of the brood stock was 271 million eggs. This difference was mainly ascribed to suboptimal collection, but also to incomplete spawning and sinking of unfertilized and dead eggs.     

Generation of a large combinatorial library of the immunoglobulin repertoire in phage lambda

A novel bacteriophage lambda vector system was used to express in Escherichia coli a combinatorial library of Fab fragments of the mouse antibody repertoire. The system allows rapid and easy identification of monoclonal Fab fragments in a form suitable for genetic manipulation. It was possible to generate, in 2 weeks, large numbers of monoclonal Fab fragments against a transition state analog hapten. The methods described may supersede present-day hybridoma technology and facilitate the production of catalytic and other antibodies.     

Genetic typing of bovine viral diarrhoea virus: most Slovenian isolates are of genotypes 1d and 1f

A selection of 43 bovine viral diarrhoea viruses isolated from mainly persistently infected cattle on 23 Slovenian farms between 1997 and 2001 were characterised genetically. Viral RNA was extracted from infected cell cultures, reverse transcribed and amplified by PCR with primers targeting the 5'-UTR and the N(pro) gene, followed by direct sequencing of purified PCR products obtained for both genomic regions. The N(pro) sequences provided the best genetic resolution, and gave also higher statistical support for phylogenetic classification of the viruses. Thirty-eight of the Slovenian isolates were of genetic subtypes 1d and 1f, four were 1b, and one subtype 1g. No BVDV type 2 viruses were found. This genetic prevalence matched those previously reported for neighbouring countries, as opposed to findings reported for more distant European countries, e.g. France, Spain and the UK. From eight cattle herds several virus isolates were analysed; with one exception all isolates from each herd were of the same genetic group. Extended sequencing of the N(pro) and part of the C gene of virus isolates with identical 5'-UTR sequences allowed differentiation between isolates obtained at different times from one herd.     

Impact of acid precipitation on freshwater ecosystems in Norway

Extensive studies of precipitation chemistry during the last 20 yr have clearly shown that highly polluted precipitation falls over large areas of Scandinavia, and that this pollution is increasing in severity and geographical extent. Precipitation in southern Norway, Sweden, and Finland contains large amounts of H⁺, SO⁼ ₄, and NO^? ₃ ions, along with heavy metals such as Cu, Zn, Cd, and Pb, that originate as air pollutants in the highly industrialized areas of Great Britain and central Europe and are transported over long distances to Scandinavia, where they are deposited in precipitation and dry-fallout. In Norway the acidification of fresh waters and accompanying decline and disappearance of fish populations were first reported in the 1920s, and since then in Sørlandet (southernmost Norway) the salmon have been eliminated from several rivers and hundreds of lakes have lost their fisheries. Justifiably, acid precipitation has become Norway's number-one environmental problem, and in 1972 the government launched a major research project entitled ‘Acid precipitation — effects on forest and fish’, (the SNSF-project). Studies of freshwater ecosystems conducted by the SNSF-project include intensive research at 10 gauged watersheds and lake basins in critical acid-areas of southern Norway, extensive surveys of the geographical extent and severity of the problem over all of Norway, and field and laboratory experiments on the effect of acid waters on the growth and physiology of a variety of organisms. Large areas of western, southern, and eastern Norway have been adversely affected by acid precipitation. The pH of many lakes is below 5.0, and sulfate, rather than bicarbonate, is the major anion. Lakes in these areas are particularly vulnerable to acid precipitation because their watersheds are underlain by highly resistant bedrock with low Ca and Mg contents. Apart from the well-documented decline in fish populations, relatively little is known about the effects of acid precipitation on the biology of these aquatic ecosystems. Biological surveys indicate that low pH-values inhibit the decomposition of allochthonous organic matter, decrease the species number of phyto-and zooplankton and benthic invertebrates, and promote the growth of benthic mosses. Acid precipitation is affecting larger and larger areas of Norway. The source of the pollutants is industrial Europe, and the prognosis is a continued increase in fossil-fuel consumption. The short-term effects of the increasing acidity of freshwater ecosystems involve interference at every trophic level. The long-term impact may be quite drastic indeed.     

Magnetic flux-line lattices and vortices in the copper oxide superconductors

A variety of recent experiments on both the static and the dynamic properties of vortices and flux-line lattices in the mixed state of the copper oxide superconductors are discussed. The experiments are of two basic types: (i) experiments that image the magnetic flux patterns either with magnetic decoration or neutrons and give information about static structures, and (ii) experiments that explore the dynamics of vortices either through the resistivity or other electrodynamic responses of the material. Results of these experiments argue in favor of the existence of a true phase transition in the high-field vortex state from a low-temperature superconducting vortex glass phase into a disordered high-temperature vortex fluid phase. The vortex glass phase transition model does a good job of explaining high-precision measurements of the dynamics at the transition. At low fields and temperatures, very long range hexatic order in the flux-line lattice is observed.