Agronomic and Economic Efficiency of Manure and Urea Fertilizers Use on Vertisols in Ethiopian Highlands

Soil fertility depletion is among the major impediments to sustained agricultural productivity especially in the less developed countries because of limited application of fertilizers. Soil fertility maintenance requires a balanced application of inorganic and organic nutrient sources. This study was conducted on a Vertisol in Ethiopia to determine the optimum farm yard manure （M） and nitrogen （N） application rates for maximum return under cereal-pulse-cereal rotation system. The main and interaction effects of M and N significantly affected biomass, grain and straw yields of wheat （Triticum durum） and tef （Eragrostis tear）, but the residual effect on chickpea （Cicer arietinum） was not significant. Application of 6 t M ha^-1 and 30 kg N ha^-1, gave the largest grain yield of both crops but a comparable result was obtained due to 3 t M ha^-1 and 30 kg N ha^-1. The economic analysis revealed that 6.85 t M ha^-1 and 44 kg N ha^-1 for wheat, and 4.53 t M ha^-1 and 37 kg N ha^-1 for tef were the economic optimum rates. The additional benefit obtained due to these rates was about 450 USD ha^-1. Therefore, application of the economic optimum combination of both organic and inorganic sources of nitrogen is recommended for use on cereals in the cereal-legume-cereal rotation system.     

Simple sequence repeats marker polymorphism in emmer wheat (<Emphasis Type="Italic">Triticum dicoccon</Emphasis> Schrank): Analysis of genetic diversity and differentiation

Genetic diversity was investigated in 73 accessions of emmer wheat (Triticum dicoccon Schrank) from 11 geographical regions using a set of 29 simple-sequence repeat (SSR or microsatellite) markers, representing at least two markers for each chromosome. The SSR primers amplified a total of 357 different alleles with an average of 12.31 alleles per locus. The number of fragments detected by each primer ranged between 6 (Xgwm1066) and 21 (Xgwm268). Null alleles were detected in nine of the 29 primers used. A high level of gene diversity index was observed. Across the 29 primers, gene diversity ranged from 0.60 (Xgwm46) to 0.94 (Xgwm655), with a mean of 0.82. There was a highly significant correlation (r=0.882; p<0.01) between gene diversity index and the number of loci, showing the number of loci per se is a strong indicator of diversity. Analysis of genetic diversity within and among eleven geographical regions revealed most of the genetic diversity of the total sample resided within regions. The coefficient of gene differentiation (Gst = 0.27) showed that the genetic variation within and among the 11 geographical regions was 73 and 27%, respectively. High value of mean number of alleles per locus was found in Iran (4.86) followed by Morocco (4.10) and Armenia (4.03). On the contrary, lower mean number of alleles per locus was detected in Yemen (2.83). The average gene diversity index across regions ranged from 0.52 (Slovakia) to 0.67 (Morocco) with an average of 0.60. Multivariate techniques of principal component analysis and clustering were employed to examine genetic relationship among the 73 emmer wheat accessions vis-à-vis geographical regions of collections. The genetic distance coefficients for all possible 55 pairs of regional comparisons ranged from 0.63 (between Iran and Armenia, Georgia and Azerbaijan, Georgia and Slovakia) to 0.97 (between Morocco and Yemen, Spain and Georgia, and Turkey and Iran) with a mean of 0.82. From the PCA results, a two dimensional plot of PC1 versus PC2 was constructed. The scatter plot of the first two principal components which explained altogether 27% of the total variation depicted the presence of a clear pattern of geographical differentiation except in few cases like accessions from Caucasian region. Similar pattern of genetic relationships among accessions was observed in cluster analysis. The study provided genetic information of emmer wheat in relation to geographical regions of origin. The information could be utilized in crop improvement, germplasm conservation programs, and in further investigation.     

Effect of different methods of land preparation on runoff, soil and nutrient losses from a Vertisol in the Ethiopian highlands

Abstract. Vertisols are among the most common, high-potential soils in the central highlands of Ethiopia, where over 88% of human and 77% of the livestock population are located. Productivity from these soils is constrained by severe waterlogging due to their physical properties and intensive rainfall in summer. Traditionally, farmers plant late in the season to avoid the waterlogging, which results in harvest yields that are far below optimal. To bridge this yield gap, the broad-bed and furrow system for surface drainage has been introduced. Despite reported yields of various crops, little is known of the on-site and off-site impacts of this system. Consequently, four land preparation methods viz. (i) broad-bed and furrow (BBF), (ii) green manure (GM), (iii) the traditional system of ridge and furrow (RF) and (iv) reduced tillage (RT) were compared on standard runoff plots for 5 years (1998–2002) at Caffee Doonsaa in the central Highlands of Ethiopia. Runoff, sediment, organic carbon and nutrient (organic nitrogen and available phosphorus) losses were determined during the last two years (2001 and 2002). Over 50% of the seasonal rainfall was lost as runoff, regardless of the treatment, with significantly more of the excess water running off BBF and RT treatments in both years. The BBF system drained 67% and 54% of rainfall as runoff in 2001 and 2002, respectively, compared with 61% and 53% from the RT system during the measurement period. Although not statistically significant, the largest sediment and total nutrient losses tended to be from the BBF. The effect of the treatments on total nutrient loss and enrichment ratio was inconsistent. The nutrient concentration in the eroded sediment was greater than that of the originating surface soil but was strongly correlated. The effect of the land preparation methods was significant and varied with crops. Recommended options for best crop productivity are BBF for lentil and RT for wheat and tef.     

Home garden system dynamics in Southern Ethiopia

Home gardens in southern Ethiopia are regarded as efficient farming systems, allowing interactions and synergies between crop, tree and livestock components. However, these age-old traditional home gardens are evolving rapidly in response to changes in both the socio-economic and biophysical environment. Altered cropping patterns, farm size and component interactions may affect the systems’ sustainability. Home gardens exhibit a huge diversity in farms and farming systems, which needs to be understood in order to design interventions for improvement. Dynamics of home gardens were studied over two-decades (1991–2013) based on a survey of 240 farm households and focus group discussions. Farms were grouped into five types: Khat-based, Enset-cereal-vegetable, Enset-based, Enset-coffee and Enset-livestock. Farm trajectories revealed a shift from food-oriented Enset-based and Enset-livestock systems to (1) cash crop oriented khat-based systems, and (2) combined food and cash crop oriented Enset-cereal-vegetable systems. In densely populated, market proximate areas a major trend was expansion of khat, from 6 to 35% of the area share per farm, while the combined area share of enset and coffee decreased from 45 to 25%. Concurrently, the cattle herd size fell from 5.8 TLU to 3.9 TLU per household. In medium populated, less accessible areas the trend was consolidation of combined production of food and cash crops. Enset and coffee together maintained a share of over 45%. Easy transport and marketing of the perishable cash-generating khat compared with traditional crops favoured its cultivation among smallholders located close to markets. The insights in home garden change in response to increasing population pressure, decreasing farm size and market development may help to design interventions to increase system sustainability.     

Molecular Fingerprinting Suggests Two Primary Outbreaks of Witches' Broom Disease (Crinipellis perniciosa) of Theobroma cacao in Bahia, Brazil

Crinipellis perniciosa (Stahel) Singer is the causal agent of witches' broom disease in the Sterculiaceae, Solanaceae, and Bixaceae families. The disease is endemic to the Brazilian Amazon, and was first reported infecting Theobroma cacao (cocoa) in the State of Bahia, Brazil, in 1989. Random amplified polymorphic DNA (RAPD) analyses were performed on 46 isolates of C. perniciosa from cocoa that were collected from 15 counties in Bahia and the Brazilian Amazon. A total of 258 RAPD loci from 20 primers and three mixed primers were analyzed. Of these loci, 108 (42%) were polymorphic, with an average of 4.7 polymorphic loci per primer produced. Genetic similarities were estimated using Nei and Li's index and UPGMA clustering. Bootstrap analysis divided the phenogram into four significantly different clusters: two groups contained isolates from Ariquemes and from Ouro Preto, Rondônia, and the other two separated the isolates from Bahia into two major groups of C. perniciosa, classified as Group 1 (G1) and Group 2 (G2). The two groups of isolates from Bahia differed for their genetic similarity with the isolates from the Brazilian Amazon. The geographic distribution of the groups in Bahia suggests two independent focal points of introduction. Ongoing programs to screen for resistant cocoa genotypes should consider both groups of isolates.     

Farmers’ Perception and Genetic Erosion of Tetraploid Wheats Landraces in Ethiopia

Assessing genetic erosion has been suggested as the first priority in any major effort to arrest loss of genetic diversity. In Ethiopia, although it is generally accepted that significant amount of genetic erosion has occurred and is still occurring, there is little data on its amount and extent. Thus, this study is conducted to quantify the extent of genetic erosion in Ethiopian tetraploid wheat landraces and to identify major causes of genetic erosion. To this end, a field survey of 126 farmers, randomly selected over five districts in eastern, south-eastern and central highlands of Ethiopia during 2001/2002 and 2002/2003 main cropping seasons was undertaken. Questioner was used to collect primary data from farmers who are potentially rich sources of information on genetic erosion at the variety level. Additional data were collected through key informant interviewing. Moreover, resampling was made from Tulo, Chiro and Harar Zuriya districts in eastern Ethiopia. Analysis of history profiles from primary and secondary data indicated a reduction in the use of local varieties over years. Triticum polonicum and T. turgidum are becoming very localized, and therefore, they are under greater threat of extinction. Using the calculation scheme: gene erosion=100%−gene integrity, i.e., the still extant landraces, genetic erosion was calculated for the three different areas where resamplings were made. Genetic erosion of 100% was observed both in T. durum and T. dicoccon in Tulo district. Likewise, genetic erosion of 85.7, 100 and 77.8%, respectively, was calculated for T. durum, T. turgidum and T. dicoccon in Chiro district. In Harar Zuriya, a genetic erosion of 88.9% for T. durum and 100% both in T. turgidum and T. dicoccon was detected. Number of farmers growing landraces of tetraploid wheats drastically decreased in all surveyed areas in the past decades. Displacement of landraces by other crops was the prominent factor for ending landrace cultivation. Farmers’ preference to yield potential and cash crops subsequently reduced the chance of maintaining landraces. Institutional factors like access to credit and the extension advice have influenced farmers’ decision regarding cultivar choice. In all surveyed areas, the most important initial source of seed of improved wheat varieties is the seed credit from the Ministry of Agriculture which uses a ‘plant now, pay later’ scheme to promote the distribution of improved varieties and fertilizers. The problem of genetic erosion through inappropriate maintenance of ex situ collections was also recognized and discussed.     

Analysis of Microsatellite Diversity in Ethiopian Tetraploid Wheat Landraces

The extent and patterns of microsatellite diversity in 141 Ethiopian tetraploid wheat landraces consisting of three species Triticum durum Desf., T. dicoccon Schrank and T. turgidum L. were analyzed using 29 microsatellite markers. A high level of polymorphism and a large number of alleles unique for each species were detected. Compared to emmer (T. dicoccon) and poulard (T. turgidum) wheats, a higher genetic diversity was observed in T. durum. The A-genome was more polymorphic than the B-genome in all the three species. Microsatellites with (GA) _n -repeats had a higher number of alleles than (GT) _n -repeats. A species pairwise comparison was made to determine the percentage of shared alleles and a large number of common alleles among species were observed. Average gene diversity, across the 29 microsatellite loci, was 0.684 for T. durum, 0.616 for T. dicoccon and 0.688 for T. turgidum. Genetic distances were lower between T. durum and T. turgidum (0.26) than between T. durum and T. dicoccon (0.34) or between T. turgidum and T. dicoccon (0.38). A significant correlation (p < 0.01) was found between the number of alleles per locus and the gene diversity in all the three species. Allelic frequency variation was highest between T. turgidum and T. dicoccon (10.62%) and lowest between T. durum and T. turgidum (4.86%). A genetic similarity coefficient of 0.34, 0.46 and 0.37 was found in T. durum, T. dicoccon, and T. turgidum, respectively. The dendogram, which was constructed on the basis of a similarity matrix using the UPGMA algorithm, distinguished all accessions represented in the study.     

Seasonal variation in the parasite burden and body condition of working donkeys in East Shewa and West Shewa regions of Ethiopia

A survey of donkeys arriving at markets in three localities in East and West Shewa regions of central Ethiopia was carried out during 2002. Total faecal worm egg counts and body condition scores were measured for a total of 963 donkeys over a 12-month period. Total faecal worm egg counts did not differ significantly between localities but there was significant (p < 0.001) seasonal variation within localities. Levels of helminth infection closely followed rainfall patterns, being lowest (956 eggs per gram of faeces, e.p.g.) at the end of the long dry season (February) and highest (2022 e.p.g.) in the middle of the long wet season (August). Body condition score was associated closely with level of helminth infection (Goodman-Kruskal measure of association 0.60-0.80). Seasonal variation in body condition score reflected the temporal changes in worm burden and the availability of forage. It is suggested that a body condition score of 3 or less could be used as a simple means of identifying donkeys that require therapeutic treatment with anthelmintic. It is further proposed that economically viable strategic control of helminths in donkeys could be achieved by administering a single annual dose of avermectin-based anthelmintic at the start of the long rainy season (May-June). This may allow donkeys to recover body condition when available forage is most abundant and nutritious. It is also recommended that protein-rich feed supplementation be provided during the later part of the dry season (November-January). This may help maintain body condition when forage is scarce and the helminth challenge is at its lowest.     

Sperm DNA integrity in Landrace and Duroc boar semen and its relationship to litter size

The sperm chromatin structure assay is a method for assessment of sperm DNA fragmentation, a parameter reported to be negatively related to field fertility in several mammal species. This method calculates a DNA fragmentation index (DFI) whose high values indicate abnormal chromatin structure. In this study, running from March 2010 until June 2017, the aim was to assess sperm DFI in stored liquid extended semen from two different pig breeds, Norwegian Landrace (NL; n = 693) and Norwegian Duroc (ND; n = 655), and to evaluate the influence on total number of piglets born (TNB). There was a significantly higher median DFI (p < 0.0001) in ejaculates from the 478 ND boars compared to the 452 NL boars. Data from 19,496 NL litters and 3,877 ND litters of the same boars were retrieved. For either breed, sow herd (p < 0.0001), parity (p < 0.05) and DFI (p < 0.05) showed significant effects on TNB. The DFI was negatively correlated to TNB in both breeds. The boars with the 5% lowest TNB had a least square means DFI of 3.05% and 2.24% in NL and ND, respectively, compared to 1.67% and 1.23% for the boars with the 5% highest TNB (p < 0.01). The DFI and the motility of the same semen samples were negatively correlated (p < 0.0001), and the high and low TNB groups showed significant differences in motility. However, this difference could not be used for practical prediction of TNB group (92.1% vs. 89.7%; p = 0.0038 and 92.3% vs. 89.5%; p = 0.018; NL and ND, respectively). In conclusion, our results indicate that sperm DNA integrity in semen with good motility and morphology may be an additional prediction parameter for fertility in pigs.