Allelochemicals in wheat (Triticum aestivum l.): variation of phenolic acids in root tissues

Analysis by GC/MS/MS showed that a worldwide collection of 58 wheat accessions differed significantly in the production of seven phenolic acids in the roots of 17-day-old wheat seedlings. The allelochemical contents among wheat accessions ranged from 24.5 to 94.5, 19.9 to 91.7, 3.7 to 15.4, 2.2 to 38.6, 1.0 to 42.2, 19.3 to 183.6, and 11.7 to 187.6 mg/kg of root dry weight for p-hydroxybenzoic, vanillic, cis-p-coumaric, syringic, cis-ferulic, trans-p-coumaric, and trans-ferulic acids, respectively. trans-Ferulic acid was identified as the most predominant phenolic acid in the roots. Phenolic acids, with the exception of syringic acid, were more concentrated in roots than in shoots. Significant correlation was found between the roots and the shoots in the contents of vanillic, cis-p-coumaric, syringic, trans-p-coumaric, and trans-ferulic acids, and in the content of each structural group of phenolic acids. Wheat accessions with high levels of total identified phenolic acids in the roots were generally strongly allelopathic to the growth of annual ryegrass.     

Elemental and redox analysis of single bacterial cells by x-ray microbeam analysis

High-energy x-ray fluorescence measurements were used to make elemental maps and qualitative chemical analyses of individual Pseudomonas fluorescens strain NCIMB 11764 cells. Marked differences between planktonic and adhered cells were seen in the morphology, elemental composition, and sensitivity to Cr(VI) of hydrated cells at spatial scales of 150 nm. This technology can be applied to natural geomicrobiological systems.     

Early origin and recent expansion of Plasmodium falciparum

The emergence of virulent Plasmodium falciparum in Africa within the past 6000 years as a result of a cascade of changes in human behavior and mosquito transmission has recently been hypothesized. Here, we provide genetic evidence for a sudden increase in the African malaria parasite population about 10,000 years ago, followed by migration to other regions on the basis of variation in 100 worldwide mitochondrial DNA sequences. However, both the world and some regional populations appear to be older (50,000 to 100,000 years old), suggesting an earlier wave of migration out of Africa, perhaps during the Pleistocene migration of human beings.     

Sodium deficiency of grazing cattle in Papua New Guinea

Summary Sodium deficiency was suspected from low saliva sodium concentrations in cattle at various sites in the lowlands of Papua New Guinea. In an experiment at Erap, Morobe Province crossbred and pedigree Brahman heifers supplemented with copper, cobalt and/or common salt showed no response to copper or cobalt supplementation. There was a significant growth response (P<0·01) to salt supplementation over a 16 week period confirming sodium deficiency in these animals. The response in the crossbreds was twice that in the purebreds. Supplemented crossbred animals grew 0·78 kg/day over the 16 week experimental period.

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Resumen Se sospechó deficiencia de sodio al encontrar valores bajos de este elemento, en la saliva de bovinos que pastoreaban sitios bajos en Pápua. En un experimento en Erap, Provincia de Morobe, novillos Brahman puros y cruzados suplementados con cobre, cobalto y/o sal comun, no mostraron respuesta al cobre o al cobalto. Hubo respuesta significative (P<0·01) a la suplementación con sal en un período de 16 semanas, confirmando así la deficiencia de sodio en estos animales, con major respuesta en los cruces que en los Brahman puros. Los primeros aumentaron 0·78 kg/dia durante el período experimental de 16 semanas.

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Résumé Une carence en sodium a été suspectée en raison de faibles concentrations en sodium dans la salive de bovins paissant à divers endroits dans les plaines de Papouasie Nouvelle Guinée. Dans une expérience conduite à Erap, Province de Morobe, des génisses métissées et de pédigré Brahman recevant un complément de cuivre, cobalt et/ou de sel ordinaire n’ont pas réagi à la complémentation en cuivre ou cobalt. La complémentation en sel a entrainé une réponse de croissance significative (P<0,01) sur une période de 16 semaines, confirmant par là la carence en sodium chez ces animaux, avec une réponse deux fois plus importante chez les métisses que les animaux de race pure. Les animaux métissés recevant un complément ont eu un gain de poids de 0,78 kg par jour pendant la période expérimentale de 16 semaines.

     

Influence of water potential on nitrification and structure of nitrifying bacterial communities in semiarid soils

The objective of this study was to examine the relationship between soil water potential, nitrifier community structure and nitrification activity in semiarid soils. Soils were collected after a 5-month dry period (end of summer) and subsequently rewetted to specific water potentials and incubated for 7 days prior to analysis of nitrification activity and nitrifier community structure. The approach used in this study targeted a 491bp segment of the amoA gene which encodes the active site of the ammonia monooxygenase enzyme, which is the key enzyme for all aerobic ammonia oxidisers. amoA serves as a useful target for environmental studies since it is both specific and universal for all ammonia oxidisers and reflects the phylogeny of the ammonia oxidisers. Our results suggest that in semiarid soils water potential plays a key role in determining the structure of ammonia oxidising bacteria (AOB), and that additionally AOB community structure is correlated to potential nitrification rate in these soils.     

Genetic variation and structure of Solanum elaeagnifolium in Australia analysed by amplified fragment length polymorphism markers

Solanum elaeagnifolium is a weed of national significance in Australia. However, the genetic diversity of S. elaeagnifolium is poorly understood. Four amplified fragment length polymorphism primer combinations were utilised to investigate the genetic variation and structure of 187 S. elaeagnifolium individuals collected from 94 locations in Australia. High genetic diversity was found, with an average Jaccard's genetic similarity at 0.26. Individuals were assigned to two genetic clusters or considered as admixed according to their membership coefficient value (q) calculated by Bayesian model‐based genetic structure analysis. This suggested that Australian S. elaeagnifolium may have originated from two distinct gene pools. These results were further supported by principal co‐ordinates analysis. Large spatial groups of individuals assigning to these two gene pools were found in western Victoria and south‐western New South Wales (NSW) and northern NSW, which correlated well with the early records of S. elaeagnifolium in both regions. The high genetic diversity found here could add difficulties to effective control of S. elaeagnifolium across regions.     

Identification of genomic regions that exhibit sexual dimorphism for size and muscularity in cattle

Sexual dimorphism, the phenomenon whereby males and females of the same species are distinctive in some aspect of appearance or size, has previously been documented in cattle for traits such as growth rate and carcass merit using a quantitative genetics approach. No previous study in cattle has attempted to document sexual dimorphism at a genome level; therefore, the objective of the present study was to determine whether genomic regions associated with size and muscularity in cattle exhibited signs of sexual dimorphism. Analyses were undertaken on 10 linear-type traits that describe the muscular and skeletal characteristics of both males and females of five beef cattle breeds: 1,444 Angus (AA), 6,433 Charolais (CH), 1,129 Hereford, 8,745 Limousin (LM), and 1,698 Simmental. Genome-wide association analyses were undertaken using imputed whole-genome sequence data for each sex separately by breed. For each single-nucleotide polymorphism (SNP) that was segregating in both sexes, the difference between the allele substitution effect sizes for each sex, in each breed separately, was calculated. Suggestively (P ≤ 1 × 10⁻⁵) sexually dimorphic SNPs that were segregating in both males and females were detected for all traits in all breeds, although the location of these SNPs differed by both trait and breed. Significantly (P ≤ 1 × 10⁻⁸) dimorphic SNPs were detected in just three traits in the AA, seven traits in the CH, and three traits in the LM. The vast majority of all segregating autosomal SNPs (86% in AA to 94% in LM) had the same minor allele in both males and females. Differences (P ≤ 0.05) in allele frequencies between the sexes were observed for between 36% (LM) and 66% (AA) of the total autosomal SNPs that were segregating in both sexes. Dimorphic SNPs were located within a number of genes related to muscularity and/or size including the NAB1, COL5A2, and IWS1 genes on BTA2 that are located close to, and thought to be co-inherited with, the MSTN gene. Overall, sexual dimorphism exists in cattle at the genome level, but it is not consistent by either trait or breed.