Towards developing resistance to chickpea chlorotic dwarf virus through CRISPR/Cas9-mediated gene editing using multiplexed gRNAs

Journal of Plant Diseases and Protection - Mastreviruses are an emerging group of viruses transmitted by leafhoppers and infect both monocot and dicot plants. Chickpea chlorotic dwarf virus...     

Wheat Seed Presoaking for Improved Germination

Seed presoaking improves wheat germination under marginal moisture conditions. The duration of seed presoaking was studied at The University of Arid Agriculture, Rawalpindi, using 10 wheat varieties. Seed presoaking beyond 12 h does not improve germination further, and beyond 21 h, germination rate is drastically reduced.     

Phenotypic variations of wheat cultivars from the North China Plain in response to cadmium stress and associated single nucleotide polymorphisms identified by a genome-wide association study

Understanding the genetic mechanisms for cadmium (Cd) uptake and translocation in common wheat (Triticum aestivum) is of significance in food Cd contamination control. In this study, a diverse panel of 132 wheat cultivars was collected from the North China Plain. The cultivars were evaluated in terms of their phenotypic variations in response to Cd stress and subjected to a genome-wide association study (GWAS) to identify single nucleotide polymorphisms (SNPs) associated with the phenotypic variations at the seedling stage. Significant phenotypic variations with high heritability were observed among the wheat cultivars exposed to 40 μmol L^-1 Cd for the studied traits, including root length (RL), shoot length (SL), root and shoot dry biomasses (RDW and SDW, respectively), root and shoot Cd concentrations (RCD and SCD, respectively), and Cd translocation factor (TF). Mean RCD, SCD, and TF ranged from 1.0 to 33.8, 0.125 to 2.022, and 0.009 to 0.321 mg g^-1, respectively. Cluster analysis showed that wheat cultivars with higher RL, SL, RDW, and SDW under Cd stress were able to accumulate more Cd in root, leading to a lower Cd TF. Mixed linear model-based association analysis detected 17 novel significant marker-trait associations (MTAs), four of which were significant at a genome-wide scale. Most of the significant MTAs controlled Cd TF and explained 17.17%-26.47% of the phenotypic variations. Some of the SNP loci were physically close to a reported Cd-related quantitative trait locus or gene on wheat chromosomes. Results of this study provided a list of wheat cultivars with the potential of low Cd accumulation and enriched our knowledge on the genetic basis of Cd uptake and translocation in wheat. Pyramiding breeding of superior alleles detected in this study may additionally reduce Cd accumulation of improved wheat cultivars with excellent agronomic traits.     

Bound water characteristics and microstructure evolution during uniaxial compression of mucky silty clay

Journal of Soils and Sediments - Compression studies can provide insights into evaluating the engineering potential and environmental impact of clay. The objective of this study was to...     

Infrared Thermal Imaging as a Rapid Tool for Identifying Water‐Stress Tolerant Maize Genotypes of Different Phenology

The main task of this research was to evaluate canopy temperature and Crop Water Stress Index (CWSI) by assessing genotype variability of maize performance for different water regimes. To that end, three hundred tropical and subtropical maize hybrids with different phenology in terms of date of anthesis were evaluated. The influence of phenology on the change in canopy temperatures and CWSI was not equal during the three dates of measurement. At the end of vegetative growth (82 days after sowing, DAS) and at the blister stage (DAS 97), a high significant difference in temperatures and CWSI (P < 0.001) were obtained between the early‐ and late‐maturity genotypes. During anthesis (DAS 89), phenology had a significant effect (P < 0.01) only for the well‐watered genotypes, while under water‐stress conditions, no differences were found between early and late genotypes in terms of canopy temperature and CWSI. High significant differences (P < 0.001) in stomatal conductance (g_s) between early and late genotypes for different treatments were observed. A relationship (R² = 0.62) between g_s and canopy temperature was obtained. Under a water‐stress canopy, temperature was measured at anthesis, which was negatively correlated with grain yield of the early (r = ?0.55)‐ and late (r = ?0.46)‐maturity genotypes in the water‐stressed condition.     

Fat extraction from acid- and base-hydrolyzed food samples using accelerated solvent extraction

This paper describes a new in-cell method for pursuing accelerated solvent extraction (ASE) prior to lipid analysis from food samples. It is difficult to pursue direct ASE with acid- or base-hydrolyzed samples due to the corrosive nature of the reagents and material limitations. In this study ion exchange based materials were used to remove acid or base reagents in-cell without compromising the recovery of lipids. The performance data are presented here for the new methods for lipid extraction for a variety of food samples and compared to the Mojonnier method. NIST Standard Reference Materials (SRM-1546 and SRM-1849) were used to validate the ASE methods. Excellent fat recoveries were obtained for the ASE methods. The new methods presented here enhance the utility of ASE and eliminate labor intensive protocols.     

Cool Season C3-Grasses (Wheat,Rye, Barley,and Oats) Differ in Shoot: Root Ratio When Applied With Different NPK Sources

Shoot:root (S:R) response in four winter C₃-grasses (cereals) viz. wheat (Triticum aestivum L.), rye (Secale cereale L.), barley (Hordeum vulgare L.) and oats (Avena sativa L.) was investigated under eight different NPK sources (S₁ = 20-20-20, S₂ = 20-27-5, S₃ = 7-22-8, S₄ = 10-10-10-20S, S₅ = 11-15-11, S₆ = 31-11-11, S₇ = 24-8-16, and S₈ = 19-6-12) in pot experiment at Dryland Agriculture Institute, West Texas A&M University, Canyon, Texas, USA during winter 2009–2010. The experiment was performed in completely randomized design (CRD) with three repeats. The objective of this experiment was to investigate whether the S:R of winter cereals differ or not when applied with different NPK sources. Considerable variations in the shoot: root was noticed in the four grasses at different growth stages, i.e., 30, 60 and 90 days after emergence (DAE) when applied with different NPK fertilizers sources. Wheat had the highest S:R of 3.4 at 30 days after emergence (DAE), barley at 60 DAE (6.5), while oats at 90 DAE (3.9). Among the NPK sources, crops had the highest S:R of 3.6, 6.2 and 3.7 when applied with S₃, S₂, and S₆ at 30, 60 and 90 DAE, respectively. Shoot to root ratio showed positive relationship with increase in shoot weight and negative relationship with increase in root weight. The NPK fertilizer S₆ (31: 11: 11), an acid loving fertilizer had negative effects on the shoot and root development of cool season cereals, but among these cereals under study, barley and oats roots were affected more than wheat and rye. It was concluded from this present study, that the four cool season cereals responded differently in terms of shoot: root to different NPK fertilizers at different growth stages.     

Role of eicosanoids, histamine, and serotonin in the pathogenesis of Klebsiella pneumoniae-induced bovine mastitis

By inoculating Klebsiella pneumoniae into the teat canals of mammary glands, coliform mastitis was induced experimentally in 6 lactating cows. Release of eicosanoids, histamine, and serotonin in plasma and milk was studied in response to 2 doses of K pneumoniae. A low dose (mean, 5,000 organisms/ml) was inoculated into cows 1 through 4, and a high dose (mean, 200,000 organisms/ml) was inoculated into cows 5 and 6. Milk and blood samples were collected before inoculation (0 hours), and hourly, from 3 to 24 hours after inoculation. Concentrations of prostaglandin F2 alpha (PGF2 alpha), prostaglandin E (PGE), thromboxane B2 (TxB2), histamine, and serotonin were measured in plasma and milk obtained from control (NaCl solution-inoculated) and infected quarters. Fluorometric analysis of milk from infected quarters revealed significantly increased histamine and serotonin concentrations regardless of the dose of K pneumoniae. The mean (+/- SEM) peak concentrations of histamine were significantly (P less than 0.01) increased from the preinoculation value of 44 (+/- 12) ng/ml to 312 (+/- 104) ng/ml in milk from infected quarters and 72 (+/- 24) ng/ml in milk from control quarters. The mean peak concentration of serotonin increased significantly from the preinoculation concentration of 436 (+/- 37) ng/ml to 1,754 (+/- 662) ng/ml and 4,867 (+/- 1,248) ng/ml in milk from control (P less than 0.02) and infected (P less than 0.001) quarters, respectively. However, serotonin concentration in milk from infected quarters was approximately 2.8 times greater than that in milk from control quarters. Concentrations of PGF2 alpha, PGE, and TxB2 in milk and plasma were evaluated by radioimmunoassay.(ABSTRACT TRUNCATED AT 250 WORDS)     

Effect of Low Temperature of Irrigation Water on Rice Growth and Nutrient Uptake

The study was designed to investigate the effect of cold irrigation water on rice growth and on uptake of N, P, K and Zn applied ca. 50, 20, 35 and 5 mg kg⁻¹ soil, respectively. Cold temperature of irrigation water reduced rice shoot and root dry weight and plant height, significantly compared to hot temperature treatment. Under low temperature stress N was a major rice growth determinant. Increased shoot concentrations of both P and Zn allevated the low temperature stress. The uptake of N, P, K and Zn reduced significantly at low temperature (16.5–20 °C soil and 20–24 °C flood water) compared to high temperature (24.5–27 °C soil and 26.5–29.0 °C), with the strongest effect being noticed for N, followed by P, K and Zn. Application of N, P, K and Zn increased their uptake in rice shoots. Nitrogen and K had synergistic effect on their uptake. Responses to N and K application and their uptake behavior were well marked at higher than at low temperature whereas reverse was true for P and Zn.