A genetic linkage map in southern‐by‐spring oat identifies multiple quantitative trait loci for adaptation and rust resistance

We developed 178 recombinant inbred lines from a southern‐by‐spring oat population designated as “TxH.” These lines were genotyped to generate a high‐quality linkage map that resolved 6,902 markers into 21 linkage groups that matched closely with the latest hexaploid oat consensus map. Three major quantitative trait loci (QTLs) affecting heading date were found in locations that are consistent with known QTLs and candidate genes, and two other QTLs affecting heading date were found in novel locations. Five QTLs affecting plant height were found. Both sets of QTLs are responsible for transgressive segregation observed for these two traits. Four QTLs affecting resistance to crown rust, caused by the pathogen Puccinia coronata f. sp. avenae, were identified. Two of these QTLs are consistent with known clusters of rust resistance genes, while two may represent new locations of novel rust resistance genes. A complete set of SNP sequences suitable for generating markers for molecular selection is provided.     

Tree planting for poverty reduction in less-favoured areas of the Ethiopian highlands

This paper assesses the potential impact of planting of eucalypt trees as a strategy to reduce poverty in a less-favoured area of the highlands of Ethiopia. Results from simulations with a bio-economic model for a less-favoured case study area in the highlands are combined with survey data at community, household and plot level to assess how general the results of the bio-economic model are. Application of the bio-economic model shows clearly that land degradation, population growth, stagnant technology and drought threaten food security. Household welfare and land quality are deteriorating rapidly in the area and interventions are urgently needed to avoid human disaster. Planting of eucalypts on land unsuitable for crop production may substantially increase household incomes if market outlets for trees can be found. Tree planting will not have severe negative effects on food production or land conservation. A policy combining promotion of tree planting and conservation of cropland may achieve win-win benefits in terms of increased household incomes as well as more sustainable land-use. Analysis of survey data from the Amhara Region of Ethiopia reveals that there is a large area of land that is unsuitable for crop production located close to all-weather roads in the less-favoured areas of the region. Few trees have been planted on this type of land up to now. The past policy seems to have discouraged tree planting except on homestead plots that are more suitable for food crops. This paper reports part of the IFPRI/ILRI project ‘Policies for Sustainable Land Management in the East African Highlands’. These two agencies have provided funds and logistical support for the work. The Norwegian Ministry of Foreign Affairs has provided funds for this research in the Amhara Region in Ethiopia. The authors also draw on earlier work funded by Research Council of Norway. Any correspondence should be directed to the first author.     

Cold tolerance during juvenile development in sorghum: a comparative analysis by genomewide association and linkage mapping

Improved cold tolerance during the juvenile phase is a major breeding goal to develop new sorghum cultivars suitable as an alternative energy crop in temperate regions. The objectives of this study were to identify marker‐trait associations for cold tolerance in a sorghum diversity panel fingerprinted with 2620 single nucleotide polymorphism (SNP) markers and to detect quantitative trait loci (QTL) in two F_2:3 populations. Traits of interest were dry matter growth rate (DMGR), leaf appearance rate (LAR), chlorophyll content (SPAD) and chlorophyll fluorescence (F_v′/F_m′ and Ф_PSII) in relation to temperature. The association panel comprised 194 genotypes, while the F_2:3 populations consisted of 80 and 92 genotypes. All populations were tested under controlled conditions in a minimum of four temperature regimes ranging from 9.4°C to 20.8°C. QTL were identified for means across environments and regression parameters describing temperature effects. Several marker‐trait associations for mean (m) DMGR, base temperature (T_b) of SPAD and Ф_PSII and temperature effect on LAR were validated by QTL detected in population 1 or 2. Promising QTL regions were found on chromosomes SBI‐01, SBI‐02, SBI‐03, SBI‐04, SBI‐06 and SBI‐09, among them genomic regions where candidate genes involved in the C‐repeat binding pathway or encoding cold‐shock proteins are located.     

Erratum to: A cross-sectional study on bovine tuberculosis in Hawassa town and its surroundings,Southern Ethiopia

Tropical Animal Health and Production -     

A cross-sectional study on bovine tuberculosis in Hawassa town and its surroundings,Southern Ethiopia

A cross-sectional study was conducted in Hawassa town and its surroundings from October 2007 to May 2008 to estimate the prevalence of bovine tuberculosis (BTB) based on comparative interadermal tuberculin test (CIDT) and abattoir survey. Accordingly, 39 herds comprising 413 cattle were subjected to CIDT, and the herd and individual animal prevalence were 48.7% (19/39) and 11.6% (48/413), respectively. One of the 16 milk samples collected from tuberculin-positive cows was culture positive. The prevalence significantly differed among the age group (P = 0.001) and management system (P = 0.001). Thus, age group over four (OR = 7.9) and animal with poor management system (OR = 4.1) had a higher odds for tuberculin reactivity compared to those with age group under four and cattle with good management system, respectively. Of the total 1,023 cattle subjected to postmortem examination, 11 (1.1%) were found to be positive for gross tuberculous lesions. Larger proportion (50%) of TB lesion was recorded in the respiratory pathway followed by digestive system (28.6%) and prescapular lymph nodes (21.4%). Of 14 tissue specimens collected from the gross lesions, four (28.6%) were positive for histopathological TB lesions. In conclusion, this study revealed the importance of BTB in the study area in particular and the region in general.     

Quantitative determination of pyrethroids, pyrethrins, and piperonyl butoxide in surface water by high-resolution gas chromatography/high-resolution mass spectrometry

A new method for determination of pyrethroids, pyrethrins, and piperonyl butoxide (PBO) by high-resolution gas chromatography/high-resolution mass spectrometry (HRGC/HRMS) was developed for surface water samples. The method is based on sampling 100 L of ambient surface water with a solid phase extraction (SPE) technique that uses both wound glass fiber filters for collecting the particulate-associated chemicals and XAD-2 resin for collecting the dissolved chemicals. The method detection limits of the analytes ranged from 0.58 to 8.16 ng/sample, which is equivalent to a detection limit range of 0.0058-0.082 ng/L for a 100 L water sample collected by the SPE technique. The SPE when coupled with HRGC/HRMS was a suitable match for detecting these chemicals at subnanogram per liter ranges that are toxicologically significant to aquatic organisms. To confirm the utility of this method for environmental applications, pyrethroids and PBO were found at subnanogram per liter concentrations in surface water samples collected from five tributaries (primarily urban creeks) of the San Francisco Bay, California.     

Occurrence of concurrent infectious diseases in broiler chickens is a threat to commercial poultry farms in Central Ethiopia

Commercial poultry production is one of the flourishing ventures of animal production in Ethiopia. It has been providing to the demands of proteins at least to the urban population, though concurrent health constraints are hampering its intended potential. This study reports the influence of infectious diseases in commercial broiler farms in central Ethiopia. In this study, clinical signs, gross lesions, laboratory tests (serology, bacterial culture, histopathology and parasitology) and farm management data were used to identify major causes of outbreaks in an age specific manner in broiler chickens in three poultry farms in Debre Zeit, Central Ethiopia. The outbreaks detected in the farms were due to mycoplasmosis, salmonellosis, colibacillosis, coccidiosis and infectious bursal disease. It is observed that the occurrence of concurrent diseases in the farms significantly affects the productivity and health status of broilers. The risk factors that predispose birds to the various infections in the different farms studied were also recorded. In addition, recommendations were also provided.     

Genotype X environment interaction in two breeds of chickens kept under two management systems in Southern Ethiopia

Rhode Island Red (RIR) and Fayoumi chickens were evaluated on-station in a college farm and on-farm in village farms, whereas local chickens were only tested under on-farm condition. Traits recorded are egg production and egg quality, body weight and feed efficiency at 4, 8 and 12 months of age. Significant age effect was found for most traits except for shell thickness, albumen height and egg length. Also, significant breed by management system interactions were found for all traits measured in both systems. Fayoumi chickens were higher in egg production in both management systems. Moreover, they were higher than RIR in feed efficiency. RIR were higher in most egg quality traits and had higher weight gain. Local chickens performed below the two exotic breeds in most of the traits, but had higher weight gain than Fayoumi. Chickens kept on-farm had poorer performance than those kept on-station in all traits except for yolk colour.     

Fusarium head blight progression and yield response of bread wheat as affected by fungicides and spray regimes under field condition in southern Ethiopia

Journal of Crop Science and Biotechnology - Fusarium head blight (FHB) is one of the destructive diseases in wheat-producing areas of the world. Field experiments were conducted during the 2019...     

Performance of camels (Camelus dromedrius) kept by pastoralists with different degrees of experience in camel keeping in Borana, Southern Ethiopia

The aim of the present study was to investigate the performances of camels kept by pastoralists with different degrees of experience in camel production. The study was conducted on 60 selected camel herds twice a year; during wet and dry seasons of 2003 and 2004 in Borana, Southern Ethiopia. The average ages at first parturition and calving intervals of breeding females were 68.1 ± 0.5 and 25.5 ± 0.4 months (LSMean ± SE), respectively. Age at first parturition was significantly reduced by use of veterinary services, while variation was not observed among Borana, Guji, Gabra and Somali herds. Calving intervals were significantly shorter (P < 0.05) in Borana (24.8 ± 0.6) and Guji (24.5 ± 1.5) than Somali herds (27.0 ± 0.5). Calving intervals were also prolonged (P < 0.05) by fixing breeding time. Annual calving, abortion and calf mortality rates were similar for the four populations and averaged 37.3%, 9.3%, 20.3% in 2003, and 41.3%, 8.2%, 14.9% in 2004, respectively. The overall mortality rate was significantly higher (P < 0.05) in Borana (10.0 ± 2.1) than in Gabra herds (4.2 ± 0.8). However, mortality was not statistically different for use of veterinary services and other managemental practices. The study showed an increase in annual herd growth by 5.7% in 2003 and 11.6% in 2004 with similarity of herd dynamics between the two years. Daily milk yield differed significantly (P < 0.05) depending on veterinary services, watering frequency and the season (7.6 L during wet and 4.3 L during dry season). Similarly, milk yield was significantly higher (P < 0.01) in Somali herds than in Borana and Gabra herds. In conclusion, the study revealed that some production and reproduction performances in camel herds have showed significant variation with varying levels of herding experience and veterinary services. This may suggest performance in pastoral camels can be enhanced with learning more about and using traditional management practices as well as improving animal health service delivery.