Segment-based coancestry,additive relationship and genetic variance within and between the Norwegian and the Swedish Fjord horse populations

ABSTRACT

The Fjord horse originates from Norway but forms a global population due to several small populations in foreign countries. There exists no information about the additive relationship and the genetic variance between these subpopulations. By collecting blood samples from Norwegian and Swedish Fjord horses, a sample of 311 Norwegian and 102 Swedish horses gave 485,918 SNPs available for analysis. Their inbreeding coefficients were calculated and compared to the pairwise coancestry and the shared genomic segments. The effective population size was almost similar with the two methods in the Norwegian Fjord horse population (63 and 71), but very different in the Swedish population (269 and 1136) and unprecise due to a much smaller number of observations. The study showed that coancestry from shared genomic segments can be used to estimate additive genetic relationship and genetic variation within and between the global populations of the Fjord horse.     

Effects of replacing timothy silage by alsike clover silage on performance,carcass traits and meat quality of finishing Aberdeen Angus and Nordic Red bulls

The objective of the study was to determine the effects of silage plant species and cattle breed on performance and meat quality of finishing bulls. A feeding experiment was conducted using thirty Aberdeen Angus (AA) and thirty Nordic Red (NR) bulls. Both breeds were randomly allotted to three experimental diets. The composition (g kg^?1 dry matter) of the diets was as follows: (i) timothy silage (TS) (650) and barley (350); (ii) TS (325), alsike clover silage (AS) (325) and barley (350); and (iii) AS (650) and barley (350). The bulls were fed a total mixed ration ad libitum. Replacing TS by AS did not affect dry‐matter intake, growth, carcass conformation or meat quality traits of the bulls, but carcass fat score tended to decrease when replacing TS by AS (P = 0·07). The AA bulls grew faster and had better feed conversion and superior carcass conformation compared with the NR bulls (P < 0·001). The loin of the AA bulls had lower shear force value and was given higher scores in sensory analyses compared with the NR bulls (P < 0·01). The experiment demonstrated that replacing TS by AS in the diet of finishing bulls had minor effects on performance or meat quality.     

Characterization of flavonoids and pectins from bergamot (Citrus bergamia Risso) peel, a major byproduct of essential oil extraction

Bergamot peel is an underutilized byproduct of the essential oil and juice-processing industry. As with other Citrus peels, it still contains exploitable components, such as pectins and flavonoids. Commercial glycoside hydrolases, specifically a combination of pectolytic and cellulolytic enzymes, solubilized a high percentage of the material (81.94%). The flavonoid profile of the peel consisted of characteristic Citrus species flavanone rutinosides and neohesperosides derived from naringenin, eriodictyol, and hesperetin. In addition, a number of minor flavanone and flavone glycosides, not found in orange and lemon peels, were identified. The majority of flavonoids were extracted in the two 70% v/v EtOH extractions. Processing this material clearly has economic potential leading to low environmental impact.     

Effects of intensive fishing on the perch population in a large oligotrophic lake in eastern Finland

The perch population in Lake Höytiäinen was intensively fished to reduce the density of the population and hence also the predation pressure by perch on vendace larvae. A hypothesis suggests that this predation can prevent recovery of commercially important vendace stock from a state of low-density. In the 1990s the density of the perch population in Lake Höytiäinen has increased, while the vendace stock has been sparse. Intensive fishing was conducted by professional fishermen with a paired bottom trawl, seine net, hoop net and small fish traps and by recreational fishermen with small fish traps. The size of perch population during the intensive fishing period was studied by test fishing with multi-mesh gillnets and the Leslie method in which trawl YPUE was regressed on the cumulative yield. The results suggest that the population size clearly diminished in the area where the fishing pressure was strongest. YPUE of test fishing decreased ca. 30% whereas the Leslie method gave almost a decrease twice as large as that of the former. Mean weight of perch increased in the trawl and test fishing catches during the intensive fishing period. The most effective fishing gear was trawl (62% of the total yield), but importance of trap net fishing by recreational fishermen was also high as they caught 22% of the total yield.     

ADAMTS17 mutation associated with primary lens luxation is widespread among breeds

Primary lens luxation (PLL) is a well-recognized, painful and potentially blinding inherited ocular condition in dogs. We screened PLL-affected dogs of 30 different breeds, to identify those which carried a previously described c.1473+1 G>A mutation in ADAMTS17 that is associated with PLL in Miniature Bull terriers, Lancashire Heelers, and Jack Russell terriers. This ADAMTS17 mutation was identified in PLL-affected dogs from 14 additional breeds. PLL-affected dogs from some breeds (most notably the Shar pei and the Brittany spaniel) did not carry the G1473+1A ADAMTS17 mutation, indicating they must suffer from a genetically distinct form of the condition. We also estimated the frequency of this ADAMTS17 mutation in some of the breeds. Our findings indicate the mutation segregates in a large number of different breeds of dog, many of which are terriers or breeds with terrier co-ancestry, but some of which have more diverse origins. Our results also indicate that the mutation is present at high frequency within most of the breeds in which it segregates. In the miniature bull terrier breed estimates of mutation frequency ranged from 0.27 to 0.39, corresponding to 7.3-15.2% PLL-affected dogs in this breed. We also identified an increased risk of PLL associated with heterozygosity at ADAMTS17, suggesting that carriers carry a low risk of developing PLL.     

Effects of three different concentrate proportions and rapeseed meal supplement to grass silage on animal performance of dairy-breed bulls with TMR feeding

A 3 × 2 factorial design with growing dairy-breed bulls was used to study the effects on animal performance of (1) proportion of concentrate (rolled barley) in the diet, and (2) inclusion of rapeseed meal (RSM) in the barley-based concentrate in a total mixed ration (TMR). The interactions between concentrate proportion and RSM supplement were also examined.Three feeding experiments comprised in total of 84 Finnish Ayrshire bulls and 6 Friesian bulls. The bulls were fed TMR ad libitum. The three concentrate proportions were 300 (L), 500 (M) and 700 (H) g/kg dry matter (DM), fed without RSM (RSM−) or with RSM (RSM+). Rapeseed meal was given so that the crude protein (CP) content of the concentrate was raised to 160 g/kg DM in the RSM+ diets. In the RSM− diets the CP content of the concentrate was 128 g/kg DM, so the CP content increased 25% with RSM supplementation. Increasing the proportion of concentrate led to a linear improvement in daily live weight gain (LWG) (P < 0.05), but there were no significant treatment differences in the DM intake (kg/d). Increasing the proportion of concentrate also led to significantly higher CP (P < 0.001) and phosphorus (P) (P < 0.001) supply and significantly improved DM and organic matter (OM) digestibility (P < 0.001). However, the digestibility of neutral detergent fibre (NDF) decreased (P < 0.001) as the proportion of concentrate increased. The feed conversion rate (kg DM/kg LWG) decreased significantly with increasing concentrate proportion (P < 0.001). Rapeseed meal supplement had no effect on animal performance, but the supply of CP (P < 0.01) and P (P < 0.001) was higher when RSM was included in the diet. The CP (P < 0.001) and NDF (P < 0.05) digestibilities were also higher for the RSM+ diets than for the RSM− diets. Because RSM at the concentration used did not affect animal performance, there is no reason to use RSM supplementation for finishing dairy bulls when there is good quality grass silage and barley-based concentrate in the TMR ration. This study also shows that there is a need to update the Finnish feeding recommendations for dairy-breed growing bulls, and extra calculations are needed for the energy and protein supply of growing dairy bulls.     

Interaction of four monoterpenes contained in essential oils with model membranes: implications for their antibacterial activity

The present article reports the antimicrobial efficacy of four monoterpenes (thymol, carvacrol, p-cymene, and gamma-terpinene) against the Gram-positive bacterium Staphylococcus aureus and the Gram-negative bacterium Escherichia coli. For a better understanding of their mechanism of action, the damage caused by these four monoterpenes on biomembranes was evaluated by monitoring the release, following exposure to the compounds under study, of the water-soluble fluorescent marker carboxyfluorescein (CF) from large unilamellar vesicles (LUVs) with different lipidic composition (phosphatidylcholine, PC, phosphatidylcholine/phosphatidylserine, PC/PS, 9:1; phosphatidylcholine/stearylamine, PC/SA, 9:1). Furthermore, the interaction of these terpenes with dimyristoylphosphatidylcholine multilamellar vesicles as model membranes was monitored by means of differential scanning calorimetry (DSC) technique. Finally, the results were related also with the relative lipophilicity and water solubility of the compounds examined. We observed that thymol is considerably more toxic against S. aureus than the other three terpenes, while carvacrol and p-cymene are the most inhibitory against E. coli. Thymol and carvacrol, but not gamma-terpinene and p-cymene, caused a concentration-dependent CF leakage from all kinds of LUVs employed; in particular, thymol was more effective on PC and PC/SA LUVS than on PC/PS vesicles, while carvacrol challenge evoked a CF leakage from PC/PS LUVs similar to that induced from PC/SA LUVs, and lower than that measured with PC vesicles. Concerning DSC experiments, these four terpenes caused a decrease in Tm and (especially carvacrol and p-cymene) DeltaH values, very likely acting as substitutional impurities. Taken together, our findings lead us to speculate that the antimicrobial effect of thymol, carvacrol, p-cymene, and gamma-terpinene may result, partially at least, from a gross perturbation of the lipidic fraction of the plasmic membrane of the microorganism. In addition to being related to the physicochemical characteristics of the compounds (such as lipophilicity and water solubility), this effect seems to be dependent on the lipidic composition and net surface charge of the microbic membranes. Furthermore, the compounds might cross the cell membranes, thus penetrating into the interior of the cell and interacting with intracellular sites critical for antibacterial activity.     

Trait‐related variation in the reproductive characteristics of female pikeperch (Sander lucioperca)

Maternal characteristics typically affect the recruitment of an exploited fish population. The size and age at maturity, as well as the effects of maternal traits on relative fecundity and egg dry weight, were studied in six exploited pikeperch populations in Finnish lakes. The among‐lake variation in the maternal characteristics was substantial. The estimated total length at maturity (L₁₀, L₅₀, L₉₀) varied between 318–444, 403–423 and 444–527 mm, respectively, largely depending on the average growth rate and body condition of pikeperch. The estimated L₅₀ was generally close to the recently imposed national minimum size limit (42 cm). The estimated age at maturity (A₅₀) ranged from 4.2 to 6.9 year. Both relative fecundity and egg dry weight significantly increased with female size and age, indicating size‐ and age‐dependent maternal effects on egg characteristics and quantity, and emphasising the importance of large individuals for reproduction. The observed among‐population differences in the size‐dependent maternal influences highlight the need for stock‐specific management of pikeperch fisheries. The conservation of large females should be promoted to increase recruitment and reduce its variability.     

The effect of concentrate level and concentrate composition on the performance of growing dairy heifers reared and finished for beef production

Abstract

The objectives of the study with growing dairy heifers were to determine the effects on animal performance of (1) concentrate level and (2) the concentrate composition in the grass silage-based diet. Animals (30 heifers) were randomly assigned to three feeding treatments: (1) low level (1.75 kg dry matter (DM)/d) of rolled barley (LB); (2) low level (1.75 kg DM/d) of commercial pelleted concentrate (LC); and (3) medium level (3.5 kg DM/d) of commercial pelleted concentrate (MC). All animals were also offered grass silage and hay. The commercial concentrate contained more crude protein than barley grain (135 g/kg DM vs. 205 g/kg DM). The data were analysed using analysis of variance and differences between the treatments were tested by orthogonal contrasts: LC vs. MC and LB vs. LC. The growth of the heifers increased and carcass conformation improved with increasing concentrate level. Commercial concentrate did not improve animal performance compared with barley grain.