Bacterial communities associated with natural and commercially grown rooibos (Aspalathus linearis)

Aspalathus linearis is a commercially important plant species endemic to the Cape Floristic Region of South Africa and is used to produce a herbal tea known as rooibos tea. Symbiotic interactions between A. linearis and soil bacteria play an important role in the survival of Aspalathus plants in the highly nutrient-poor, acidic fynbos soil. The aim of this study was to characterize and compare rhizosphere and bulk soil bacterial communities associated with natural and commercially grown A. linearis, as well as the effect of seasonal changes on these communities. Bacterial communities were characterized using high throughput amplicon sequencing, and their correlations with soil chemical properties were investigated. The N-fixing bacterial community was characterized using terminal restriction fragment length polymorphism and real time quantitative polymerase chain reaction. Actinobacteria, Proteobacteria, and Acidobacteria were the most dominant bacterial phyla detected in this study. Highly similar bacterial communities were associated with natural and commercially grown plants. Significant differences in the bacterial community were observed between rhizosphere and bulk soils collected in the dry season, while no significant differences were detected in the wet season. This study provides insights into bacterial community structure and potential factors shaping bacterial community structure with commercially important A. linearis.     

Effects of different variable sets on the potential distribution of fish species in the Amazon Basin

Estimating species’ potential distribution is one of the main objectives of macroecology, especially when sampling biases can affect knowledge on how environmental variables affect species distribution. Ecological niche models estimate species’ environmental niches from different variables and their occurrences. Using the presence-only data from eight Amazonian fish species, which inhabit rivers and streams, we aimed to (a) explore the effect of different sets variables on the spatial distributions of target species and (b) evaluate the predictive responses of MaxEnt to sets of variables with different degrees of complexity. MaxEnt has high flexibility in relation to the input data and its performance is influenced by a moderate number of adjustable parameters, allowing for high precision results when balancing underestimation and overestimation errors. We used environmental predictors in MaxEnt the principal components of climatic, topographic and edaphic variables as inputs. The combination of topographic and edaphic variables produced more precise and spatially restricted distribution ranges for all species when compared to those generated with climatic variables. All models reached high AUC values, especially for stream species. Modelled range sizes were broader for the river species, suggesting different tolerance thresholds and habitat preferences when compared to stream species. The complexity of the different variables sets did not affect MaxEnt's prediction capacity. However, for stream species, MaxEnt showed a greater predictive power. This work increases the knowledge with regards to the influence of different environmental predictors on the spatial patterns of the distribution of Amazonian fish.     

A KCNJ10 mutation previously identified in the Russell group of terriers also occurs in Smooth-Haired Fox Terriers with hereditary ataxia and in related breeds

Background

Hereditary ataxias with similar phenotypes were reported in the Smooth-Haired Fox Terrier, the Jack Russell Terrier and the Parson Russell Terrier. However, segregation analyses showed differing inheritance modes in these breeds. Recently, molecular genetic studies on the Russell group of terriers found independent mutations in KCNJ10 and CAPN1, each associated with a specific clinical subtype of inherited ataxia. The aim of this study was to clarify whether or not Smooth-Haired Fox Terriers with hereditary ataxia and dogs of other related breeds harbor either of the same mutations. A sub goal was to update the results of KCNJ10 genotyping in Russell group terriers.

Findings

Three Smooth-Haired Fox Terriers with hereditary ataxia and two Toy Fox Terriers with a similar phenotype were all homozygous for the KCNJ10 mutation. The same mutation was also found in a heterozygous state in clinically unaffected Tenterfield Terriers (n = 5) and, in agreement with previous studies, in Jack Russell Terriers, Parson Russell Terriers, and Russell Terriers.

Conclusions

A KCNJ10 mutation, previously associated with an autosomal recessive spinocerebellar ataxia in Jack Russell Terriers, Parson Russell Terriers, and Russell Terriers segregates in at least three more breeds descended from British hunting terriers. Ataxic members of two of these breeds, the Smooth-Haired Fox Terrier and the Toy Fox Terrier, were homozygous for the mutation, strengthening the likelihood that this genetic defect is indeed the causative mutation for the disease known as “hereditary ataxia” in Fox Terriers and “spinocerebellar ataxia with myokymia, seizures or both” in the Russell group of terriers.     

Versuche zur Verwendung von „Ersatzwirten” bei Laborzuchten der Zehrwespen Micropleetron fuscipennis Zett. (Chalcididae,Eulophinae) und Pteromalus alboannulatus Ratz. (Chalcididae,Pteromalinae)

Zusammenfassung 1. Die Weibchen der ChalcididePteromalus alboannulatus Ratz. sind in Laborzuchten außer an Puppen der Kieferneule(Panolis flammea Schiff.) erfolgreich auch zur Fortpflanzung an Puppen vonBupalus piniarius L.,Ellopia prosapiaria L.,Hematurga atomaria L.,Boarmia bistortata Goeze undSphinx pinastri L. zu bringen.2. Zuchten der ChalcidideMicroplectron fuscipennis Zett. lassen sich bei Mangel anDiprion-Kokons mit Hilfe der Kokons vonLygaeonematus abietum Htg., besser mit solchen vonLygaeonematus wesmaeli Tischb. weiterführen. Im Freilandversuch ergibt sich jedoch eindeutig eine Bevorzugung derDiprion-Kokons.Neuerdings auch:Dahlbominus.Neuerdings auch:Dirhicnus.     

Seasonal variation of soil respiration in a Pinus cembra forest at the upper timberline in the Central Austrian Alps

Soil respiration (R) of a 95-year-old Pinus cembra L. forest at the alpine timberline was measured continuously from October 2001 to January 2003 with an automated multiplexing gas exchange system. There was significant spatial variability in soil respiration, and R at a soil temperature of 10 degrees C (R10) decreased by about 20% m(-1) with increasing distance from the trunk. Needle litter and fine root density also decreased. The spatially averaged annual soil CO2 efflux was 35 g C m(-2) year(-1) in 2002. About 70% of the temporal variation in soil respiration could be explained by variations in soil temperature, whereas the influence of soil water potential and thus soil water content was negligible because soil water availability was supra-optimal.     

Interactions between soil scarification and Norway spruce seedling types

Interactions between scarification treatments and seedling types of Norway spruce were examined at two different locations in southern Sweden. The scarification treatments were not scarified control, mounding and soil inversion and the seedling types were a 10 week-old containerized seedling (mini seedling), a 2 year-old containerized seedling and a 2 year-old hybrid seedling, grown as a containerized seedling the first year and as a bare-root seedling the second year. Site preparation intensity had a greater effect on the mini seedlings. The results indicated that mini seedlings established faster in the soil inversion treatment compared to the larger seedling types. At the same seedling age, the mini seedlings had faster or similar growth rate as the containerized and the hybrid seedlings regardless of scarification treatment. Although mini seedlings grew as well as or even better than larger seedlings if they were successfully established, they were more sensitive to their planting environment and proper handling was critical. Problems with frost heaving and competing vegetation have to be taken into consideration when choosing site preparation method and seedling type.     

Age effects on Norway spruce (Picea abies) susceptibility to ozone uptake: a novel approach relating stress avoidance to defense

Cumulative ozone (O3) uptake and O3 flux were related to physiological, morphological and biochemical characteristics of Norway spruce (Picea abies (L.) Karst.) trees of different ages. Under ambient CO2 conditions, photosynthetic capacity (Amax) declined in mature trees when cumulative O3 uptake into needles, which provides a measure of effective O3 dose, exceeded 21 mmol m-2 of total needle surface area. A comparable decline in Amax of seedlings occurred when cumulative O(3) uptake was only 4.5 mmol m-2. The threshold O3 flux causing a significant decline in Amax ranged between 2.14 and 2.45 nmol m-2 s-1 in mature trees and seedlings subjected to exposure periods of > or = 70 and > or = 23 days, respectively. The greater O3 sensitivity of young trees compared with mature trees was associated with needle morphology. Biomass of a 100-needle sample increased significantly with tree age, whereas a negative correlation was found for specific leaf area, these changes parallel those observed during differentiation from shade-type to sun-type needles with tree ontogeny. Age-dependent changes in leaf morphology were related to changes in detoxification capacity, with area-based concentrations of ascorbate increasing during tree ontogeny. These findings indicate that the extent of O3-induced injury is related to the ratio of potentially available antioxidants to O3 influx. Because this ratio, when calculated for ascorbate, increased with tree age, we conclude that the ratio may serve as an empirical basis for characterizing age-related differences in tree responses to O3.     

The carbon budget of an adult <Emphasis Type="Italic">Pinus cembra</Emphasis> tree at the alpine timberline in the Central Austrian Alps

We investigated carbon (C) uptake and respiratory losses of an adult Pinus cembra tree at the alpine timberline throughout an entire year by means of an automated, multiplexing gas exchange system. These chamber measurements were then combined with biomass data for scaling up the C budget to the tree level. Integrated over an entire year, the cumulative C gain of the tree under study was 23.5 kg of C in 2002. The daily C balance was negative for 5 months and the estimated total wintertime respiratory losses were 9% of the amount of C fixed during the growing season. The total annual C loss of the tree consumed 55% of the annual net C gain and the remaining surplus was stored in new tissues (36%) and used for fine root growth (9%). Thus, the overall C budget of P. cembra at the upper timberline is balanced fairly well, although the C sink strength in fine roots is strongly limited owing to low root zone temperatures when compared to conifers at lower elevation sites.     

Untersuchungen über die Ausbreitung von Nonnenfaltern durch Markierung mit Seltenen Erden

Zusammenfassung In der vorliegenden Arbeit werden Laborversuche zur Markierung von Nonnenraupen und Nonnenfaltern mit den Seltenen Erden Europium und Dysprosium behandelt, sowie Freilanduntersuchungen zum Studium der Ausbreitung mit Europium gekennzeichneter Nonnenfalter. Imagines, die mit Mengen von 1/Exemplar im Raupenstadium besprüht worden waren, erwiesen sich, ebenso wie im Vorjahr in derselben Weise behandelte Kiefernspinner, als deutlich markiert. Zur Kennzeichnung der Falter gelangten im Labor und im Freiland 10 Europium, im Labor auch 10 Dysprosium/Exemplar mittels Besprühung erfolgreich zur Anwendung. Die Ausbreitungsuntersuchungen ergaben einen Überflug markierter Falter auf eine Entfernung von 2 km.

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Summary The present paper describes laboratory experiments in marking nun-caterpillars and nun-moths with the rare earths Europium and Dysprosium, as well as field studies on the spread of nun-moths marked with Europium. Nun-moths, sprayed with quantities of 1/individual in the caterpillar stage, proved distinctly marked, and so did pine spinners(Dendrolimus pini) treated the same way past year. Marking of moths succeeded in both laboratory and field by spraying with 10 Europium, in the laboratory also with 10 Dysprosium per individual. Spreading studies revealed marked moths overflying distances of 2 kilometres.

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Résumé L'ouvrage présent traite d'essais en laboratoire sur le marquage de chenilles et de papillons de la Nonne(L. monacha) au moyen des terres rares Europium et Dysprosium, ainsi que de recherches au terrain sur l'expansion de papillons de cette espèce marqués d'Europium. Les images de la Nonne, ayant été aspérgées au stade larvaire d'une dose de 1 par individu, se sont avérées distinctement marquées, de même que les Bombyx du Pin traités de la même manière l'année passée. — Le marquage de papillons a été effectué avec succès au laboratoire et au terrain au moyen de 10 d'Europium — au laboratoire aussi de 10 de Dysprosium — par individu, appliqués par aspersion. Les recherches sur l'expansion ont révélé un survol de papillons marqués à une distance de 2 km.

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Für weitgehende Unterstützung der entomologischen Untersuchungen sei den Herren Dr. W. Schedl, Förster C. Holzschuh und Förster F. Stradner der forstlichen Bundesversuchsanstalt, der physikalischen Auswertung Herrn Ing. D. Koch, Reaktorzentrum Seibersdorf, herzlich gedankt. Besonderer Dank sei auch der Landesforstinspektion Niederösterreich, der Bezirksforstinspektion Waidhofen/Thaya und der Forstverwaltung von Fischen-Ankern für großzügige Hilfe bei der Durchführung der Freilanduntersuchungen ausgesprochen.