Genetic Diversity of Ethiopian Tef [(Eragrostis tef (Zucc.) Trotter] Released and Selected Farmers’ Varieties along with Two Wild Relatives as Revealed by Microsatellite Markers

Journal of Crop Science and Biotechnology - Knowledge on the extent and pattern of diversity in crop species is a precondition for any crop improvement as it helps breeders in determining apt...     

Cross-sectional study on Contagious Caprine Pleuro Pneumonia in selected districts of sedentary and pastoral production systems in Southern Ethiopia

A study to estimate the seroprevalence of Contagious Caprine Pluropneumonia (CCPP) in southern Ethiopia was conducted from November 2005 to June 2006. Two districts from sedentary (Arbaminch and Boreda) and pastoral (Hammar and Bena-Tsemay) production systems were included in the study. Sera samples were collected from 913 goats (234 from sedentary and 679 from pastoral) to check for CCPP serostatus. The animals were sampled from 155 flocks (44 pastoral and 111 sedentary). Five clinically suspected CCPP cases were also sacrificed and attempt was made to isolate Mycoplasma capricolum capripneumoniae (MccP) from lung tissue, nasal swab and plural exudates. Sera samples were tested for the presence of CCPP antibodies using CFT. The overall seroprevalence recorded in the study was 18.61%. The corresponding seroprevalences for sedentary and pastoral production systems were 27.78% and 15.46% respectively. Regarding districts, the prevalence in Hammar was 15.63% while that of Bena-Tsemay 15.29%. In Arbaminch and Boreda the percent of seroreactors were 23.01 and 32.23% respectively. Out of 44 pastoral and 111 sedentary flocks, 50.45% of pastoral and 65.91% of sedentary flocks had at least one seroreactor goat per flock respectively. Both in the univariable and multivariable logistic regression analysis, seropositivity was found to have strong association with sedentary production system (P < 0.05, OR = 2.24) and adult age (P < 0.05, OR = 1.77). In microbiological study, two broth cultures from thoracic fluid and two broth cultures from lung tissue samples were found to be positive for Mycoplasma capricolum capripneumoniae (MccP). In conclusion, both the serological study and bacteriological isolation confirmed the disease CCPP being an important disease that demands serious attention in both production systems.     

Reference architecture design for farm management information systems: a multi-case study approach

Precision Agriculture - One of the key elements of precision agriculture is the farm management information system (FMIS) that is responsible for data management, analytics and subsequent decision...     

Analyses of genetic diversity and population structure of anchote (Coccinia abyssinica (Lam.) Cogn.) using newly developed EST-SSR markers

Anchote (Coccinia abyssinica (Lam.) Cogn.) is a perennial root crop belonging to Cucurbitaceae family. It is endemic to Ethiopia and distributed over wide range of agro-ecologies. For further improvement and efficient conservation of this crop, characterization of its genetic diversity and its pattern of distribution is a vitally important step. Expressed sequence tags-simple sequence repeats (EST-SSRs) markers were developed from publicly available watermelon [Citrullus lanatus (Thunb.) Matsum. & Nakai] ESTs in the GenBank database. Among those novel markers, eight were polymorphic and subsequently used for genetic diversity and population structure analyses of 30 anchote accessions collected from western Ethiopia. A total of 24 alleles were obtained across the eight polymorphic loci and 30 accessions that revealed moderate level of genetic diversity in this minor crop. Among the eight loci, locus CA_06 was the most informative with six alleles and polymorphic information content (PIC) of 0.76. The accessions showed about threefold variation in terms of genetic diversity, with expected heterozygosity (He) ranging from 0.15 (accession An) to 0.44 (accession Dg). Other accessions with higher genetic diversity include Ar and Gu (He?=?0.43 and 0.41, respectively). Analysis of molecular variance (AMOVA) revealed that the variation within accessions and among accessions accounted for 84.7% and 15.3% of the total variation, respectively. The study revealed low but significant population differentiation in this crop with no clear pattern of population structure. The EST-SSR markers developed in this study are the first of their kind for anchote and can be used for characterization of its wider genetic resources for conservation and breeding purposes.

     

The Effect of Providing Feed Supplementation and Anthelmintic to Donkeys during Late Pregnancy and Lactation on Live Weight and Survival of Dams and Their Foals in Central Ethiopia

Anthelmintic treatment (A), feed supplementation (F), anthelmintic and feed supplementation (A + F) or traditional management (Control) was given to 166 pregnant female donkeys in three localities (Holetta, Debre Zeit and Adami Tulu) in Ethiopia during an on-farm study. Treatments started during the last trimester of pregnancy and continued until 6 months after parturition when the foals were weaned. The same treatments were administered to foals once they reached 1 month of age. Live weights of adults and foals were measured throughout the study along with work output of adult donkeys and survival to weaning of the foals. Faecal worm egg counts (FEC) and blood packed cell volumes (PCV) were recorded monthly. When applied alone, anthelmintic treatment (A) or feed supplementation (F) had no significant effect on live weight gain or foal survival. However, when combined, anthelmintic and feed supplementation (A + F) significantly (p < 0.05) improved both live weight gain in adults and foals and foal survival. Workout was not affected by any of the treatments. Treatments A and A+F resulted in a highly significant (p<0.001) reduction in FEC in all three localities during the course of study and for at least 6 months after the last dose of anthelmintic in one of the study areas (Holetta). None of the treatments had any significant effect on PCV. Donkey owners in Ethiopia should be encouraged to adopt both anthelmintic treatment and feed supplementation if they expect tangible benefits in animal performance.     

Neospora caninum versus Brucella spp. exposure among dairy cattle in Ethiopia: A case control study

This case-control study aimed at assessing the relative association of Neospora caninum and Brucella species exposure with reproductive disorders. The study was carried out between October 2011 and June 2012 on 731 dairy cows sampled from 150 dairy farms in selected 17 conurbations of Ethiopia. Two hundred sixty-six of the cows were categorized as cases based on their history of abortion or stillbirth while the remaining 465 were controls. The presence of antibody to N. caninum was screened using indirect ELISA, while Brucella spp. exposure was assayed serially using Rose Bengal Plate Test and Complement Fixation Test. Exposure to N. caninum was more frequently observed among cases (23.8 %) than controls (12.7 %), while no significant difference (p?>?0.05) was noted for Brucella exposure between the two groups. Moreover, the proportion of cows with disorders like retention of fetal membrane, endometritis and increased inter-calving period were significantly higher (p?<?0.05) among Neospora seropositive cows. In conclusion, the finding discloses the strong association of N. caninum with reproductive disorders compared to Brucella spp. exposure. However, neither N. caninum nor Brucella spp. could explain the majority (73.2 %) of the reported abortions and stillbirths in cattle. Hence, this observation underscores the need for more intensive investigation on the identification of causes of the aforementioned disorders in dairy cattle of Ethiopia.     

Cattle brucellosis in traditional livestock husbandry practice in Southern and Eastern Ethiopia,and its zoonotic implication

Background

Cattle brucellosis has significant economic and zoonotic implication for the rural communities in Ethiopia in consequence of their traditional life styles, feeding habits and disease patterns. Hence, knowledge of brucellosis occurrence in traditional livestock husbandry practice has considerable importance in reducing the economic and public health impacts of the disease.

Methods

A total of 1623 cattle sera were serially tested using the rose Bengal test as screening and complement fixation test as confirmatory tests. The Stata survey command was used to establish prevalences for the overall and individual variables, while potential risk factors for seropositivity were analyzed using a multivariable logistic regression analysis.

Results

The results showed that 3.5% (95% CI = 2.4, 4.5%) of the animals and 26.1% (95% CI = 18.6, 33.7) of the herds tested had antibodies against Brucella species. Village level seroprevalence ranged from 0% to 100%. A higher seroprevalence was observed in pastoral system than mixed farming although this variable was not significant in the final model. The final logistic regression model identified herd size; with large (odd ratio (OR) = 8.0, 95% CI = 1.9, 33.6) and medium herds (OR = 8.1, 95% CI = 1.9, 34.2) showing higher risk of Brucella infection when compared to small herds. Similarly, the odds of Brucella infection was higher in cattle aged above 4 years when compared to age groups of 1-2 (OR = 5.4, 2.1, 12.9) and 3-4 years (OR = 3.1, 95% CI = 1.0, 9.6). Herd level analysis of the risk factors revealed that large and medium herds as well as herds kept with multiple livestock species were at higher risk of acquiring Brucella infection. Brucellosis in traditional livestock husbandry practices certainly poses a zoonotic risk to the public, in consequence of raw milk consumption, close contact with animals and provision of assistance during parturition. Due to lack of diagnostic facilities and information on its occurrence, human brucellosis is most likely misdiagnosed for other febrile diseases prevailing in the areas and treated empirically.

Conclusions

The results of this study demonstrated that bovine brucellosis is widely prevalent in the study areas particularly in pastoral production system. Hence, the study suggests the need for implementing control measures and raising public awareness on prevention methods of brucellosis.     

Analysis of variation in agronomic characters and partial resistance to barley leaf rust (Puccinia hordei) pathotype ETPh7611 of barley landrace collections

European Journal of Plant Pathology - The main germplasm resource bases used for genetic diversity in disease resistance include wild ancestral species, landraces and commercial varieties. In this...