The contribution of<Emphasis Type="Italic"> Phragmites australis</Emphasis> litter to methane (CH<Subscript>4</Subscript>) emission in planted and non-planted fen microcosms

The contribution of Phragmites australis (Cav.) Trin. ex Steud. (common reed) litter as an origin of CH ₄-C was studied in a microcosm experiment. ¹⁴C-labelled, dried and ground P. australis root and shoot litter was buried in waterlogged, planted or non-planted fen microcosms. The evolution of ¹⁴CO ₂ and ¹⁴CH ₄ from the pots was monitored during the 35-day experiment. The ¹⁴C activity in the shoots and roots of the plants, soil, and inundation water was also analysed at the end of the experiment. Up to 40% of the released CH ₄-C originated from the added litter, whereas the rest originated from old soil organic matter. The comparison of planted and non-planted pots suggested that the contribution of recent plant-derived C (i.e. root exudates) to CH ₄ emission was negligible. The proportion of litter-derived CH ₄-C was significantly higher in the planted pots, suggesting that the presence of plants enhanced the formation of CH ₄ from litter. The major part of the initial ¹⁴C activity was recovered from the soil. About 3% was recovered from the inundation water, about 10% was emitted as CO ₂, and only <0.01% as CH ₄. However, these results demonstrated that plant litter and old soil organic matter are the major sources of CH ₄-C in fens during the early growth stage of P. australis.     

Impacts of anthropogenic N additions on nitrogen mineralization from plant litter in exotic annual grasslands

Urban regions of southern California receive up to 45 kg N ha^-1 y^-1 from nitrogen (N) deposition. A field decomposition study was done using ¹⁵N-labelled litter of the widespread exotic annual grass Bromus diandrus to determine whether elevated soil N is strictly from N deposition or whether N mineralization rates from litter are also increased under N deposition. Tissue N and lignin concentrations, which are inversely related in field sites with high and low N deposition, determine the rate at which N moves from plant litter to soil and becomes available to plants. The effect of soil N on N movement from litter to soil was tested by placing litter on high and low N soil in a factorial experiment with two levels of litter N and two levels of soil N. The litter quality changes associated with N deposition resulted in faster rates of N cycling from litter to soil. Concentrations of litter-derived N in total N, NH₄⁺, NO₃⁻, microbial N and organic N were all higher from high N/low lignin litter than from low N/high lignin litter. Litter contributed more N to soil NH₄⁺ and microbial N in high N than low N soil. At the end of the study, N mineralized from high N litter on high N soil accounted for 46% of soil NH₄⁺ and 11% of soil NO₃⁻, compared to 35% of soil NH₄⁺ and 6% of soil NO₃⁻ from low N litter on low N soil. The study showed that in high N deposition areas, elevated inorganic soil N concentrations at the end of the summer N deposition season are a result of N mineralized from plant litter as well as from N deposition.     

Dendritic cell stimulation by mycobacterial Hsp70 is mediated through CCR5

An effective host immune response to mycobacterial infection must control pathogen dissemination without inducing immunopathology. Constitutive overexpression of mycobacterial heat shock protein (myHsp70) is associated with impaired bacterial persistence, but the immune-mediated mechanisms are unknown. We found that myHsp70, in addition to enhancing antigen delivery to human dendritic cells, signaled through the CCR5 chemokine receptor, promoting dendritic cell aggregation, immune synapse formation between dendritic cells and T cells, and the generation of effector immune responses. Thus, CCR5 acts as a pattern-recognition receptor for myHsp70, which may have implications for both the pathophysiology of tuberculosis and the use of myHsps in tumor-directed immunotherapy.     

Use of aerial thermal imaging to estimate water status of palm trees

A methodology to estimate water status of palm trees from aerial thermal images was developed. Deficit irrigation of 80% in three drip-irrigated date-palm plots in the northern Dead Sea region was manipulated during the winter of 2007 and 2008. An uncooled thermal camera was used for extensive aerial imaging to detect palm trees and pure-canopy pixels by using only aerial thermal images. An automatic procedure, based on watershed segmentation analysis, was developed which enabled detection of all palm trees in the thermal images. Two new methods were developed to select palm trees and pure pixels within them: basin-based and pixel-based. From the temperatures of pure-canopy pixels, significant differences were found between palm trees under commercial and deficit irrigation regimes, in all three plots. Automated detection of canopy, based on aerial thermal images, is a key step towards commercial mapping of within-plot water-status variability. A protocol, based on the developed methodology, was suggested for mapping water status variability in a palm plot, and for irrigation scheduling.     

Physicochemical and Enzyme Characterization of Small and Large Starch Granules Isolated from Two Maize Cultivars

In this study, some morphological, physicochemical, and the initial characterization of the starch granule enzymes of blue and white maizes of small and large granules are described. Starch was isolated from blue and white maizes, and the small and large granules were separated. The efficiency of separation was higher in large granules than small of the blue maize starch. The amylose content was slightly greater (1.3%) in large granules than smaller in both starches studied. No differences in the average gelatinization temperature were found between large and small granules, but the enthalpy of gelatinization value was higher in the small granules. The electrophoretic pattern showed that the granule‐bound starch synthase (GBSSI) had higher expression in large than small granules and that explain the higher amylose content in the former granules. The differences showed in the starch biosynthesis enzymes in small and large granules might explain partially the physicochemical and functional properties of maize.     

Identifying nitrogen-efficient potato cultivars for organic farming

In organic farming, nitrogen efficiency of potato might vary among cultivars, even within the same maturity type. We therefore analysed in depth the response to nitrogen of a diverse set of cultivars, grown at different locations (differing in soil type and management) and in four years (differing in temperature and rainfall patterns). Yield increased with an increase in nitrogen supply and with growing later cultivars if the crop cycle lasted long enough. When crops had to be flamed to prevent spread of late blight, late cultivars yielded less than early cultivars, especially under high nitrogen. By measuring the fraction of soil covered by green leaves throughout the growing season and using a model, we analysed canopy development in detail and related nitrogen and genotype sensitive model parameters to tuber yield. In one year with early, temporary drought, model prediction was poor. We observed that cultivars that rapidly established a high maximum soil cover, maintained that maximum for long and senesced slowly, could sustain high yields. When late-blight infection was late, these (mid)-late cultivars showed high agronomic nitrogen use efficiency, but were not (always) high in nitrogen uptake efficiency, accumulation of nitrogen in the tubers or nitrogen utilisation efficiency. When late-blight infection started early, early or mid-late cultivars that rapidly established a high maximum soil cover under low nitrogen availability gave best performance. In most years, early canopy development is responsive to nitrogen, shows genetic variation, and is significantly related to early tuber yield. Nitrogen-efficient cultivars suitable for organic production should have rapid early canopy development, a high agronomic nitrogen use efficiency and nitrogen utilisation efficiency, but a low nitrogen concentration in the tubers.     

Physicochemical Properties of Oat Varieties and Their Potential for Breadmaking

The breadmaking potential of six oat varieties was compared with and related to their physicochemical properties. The most significant differences in the bread characteristics were found in the crumb structure. The varieties Buggy, Energie, and Zorro resulted in good bread quality with an even gas‐cell distribution characterized by a high number of relatively small pores. In contrast, Typhon, Ivory, and Nord 08/311 each had a large hole in the center of the crumb and accordingly poor quality. Breads differed little in specific volume, bake loss, and density. Rheological analysis revealed positive effects of low batter resistance to deformation on oat bread quality. On the basis of the physicochemical characterization, protein and fat contents were identified as key factors responsible for differences observed in bread quality, provided that starch damage and water‐hydration capacity were low. Additionally, high setback and final viscosity, as determined by Rapid Visco Analyser (RVA) analysis, positively affected oat bread quality. High α‐amylase activity was found to influence negatively the breadmaking performance of oats. Overall, protein, fat, dietary fiber content, starch pasting properties, and α‐amylase activity were responsible for the breadmaking properties of oat varieties.     

Biodegradability of Disinfectants in Surface Waters from Buenos Aires: Isolation of an Indigenous Strain Able to Degrade and Detoxify Benzalkonium Chloride

Biodegradability of chlorhexidine (CH), triclosan (TC), and benzalkonium chloride (CBA) has been tested in 18 surface water sampling points in the urban area of Buenos Aires. Sampling points were located in both the Reconquista and the Matanza-Riachuelo basins as well as in the La Plata River. High tolerance to the three disinfectants was found and indigenous strains capable of degrading CBA and TC were isolated. Neither tolerance nor biodegradation were correlated with sewage pollution. A strain that degrades CBA was identified as belonging to the genus Pseudomonas using the API20NE system and 16SRNA sequencing. In batch assays, the strain was capable of degrading 100, 200, and up to 500 mg L^?1 of CBA in 10, 25, and 46 h respectively with specific growth rates (μ) of 0.56, 0.30, and 0.14 h^?1. The efficiency of the process was between 99.5–98.0% in terms of compound removal and between 93.8–89.1% in terms of chemical oxygen demand (COD). The detoxification of the compound as a result of the biodegradation was assessed using Pseudokirchneriella subcapitata, Vibrio fischeri, and Lactuca sativa as test organisms.     

Marine myxobacteria as a source of antibiotics--comparison of physiology, polyketide-type genes and antibiotic production of three new isolates of Enhygromyxa salina

Three myxobacterial strains, designated SWB004, SWB005 and SWB006, were obtained from beach sand samples from the Pacific Ocean and the North Sea. The strains were cultivated in salt water containing media and subjected to studies to determine their taxonomic status, the presence of genes for the biosynthesis of polyketides and antibiotic production. 16S rDNA sequence analysis revealed the type strain Enhygromyxa salina SHK-1(T) as their closest homolog, displaying between 98% (SWB005) and 99% (SWB004 and SWB006) sequence similarity. All isolates were rod-shaped cells showing gliding motility and fruiting body formation as is known for myxobacteria. They required NaCl for growth, with an optimum concentration of around 2% [w/v]. The G + C-content of genomic DNA ranged from 63.0 to 67.3 mol%. Further, the strains were analyzed for their potential to produce polyketide-type structures. PCR amplified ketosynthase-like gene fragments from all three isolates enhances the assumption that these bacteria produce polyketides. SWB005 was shown to produce metabolites with prominent antibacterial activity, including activity towards methicillin resistant Staphylococcus aureus (MRSA) and Staphylococcus epidermidis (MRSE).     

Assessment of synthetic chemicals for disruption of Rhynchophorus ferrugineus response to attractant-baited traps in an urban environment

The red palm weevil (RPW), Rhynchophorus ferrugineus Olivier (Coleoptera, Curculionidae), is one of the most severe pests of ornamental palm species in urban areas of Mediterranean countries. Aiming to discover inhibitory semiochemicals for RPW population management in urban environments, we conducted electroantennographic (EAG) screenings of 17 commercially available synthetic compounds, representing three groups of plant volatiles (isoprenoids, phenyl propanoid derivatives and fatty acid derivatives) known for their repellent effects toward insects. These tests were followed by trap-based screenings of EAG-active menthone, α-pinene and methyl salicylate, singly and in combination, under urban conditions. In EAG bioassays, RPW antennae of both sexes showed positive dose-dependent responses to 13 of the 17 synthetic chemicals with significant differences among them. In field trapping experiments, conducted in the city of Palermo, Italy, from weeks 31 to 38 in 2010 and 2011, α-pinene, tested singly or in combination with methyl salicylate (2010) or menthone (2011), reduced trap catches by about 30% to 40%. Methyl salicylate and menthone alone were inactive. In conclusion, RPW is significantly affected by α-pinene. This isoprenoid is a promising disruptant for semiochemical-based management of this pest. In addition, identification of a large number of EAG-active chemicals could serve as a database for future design of active repellents or attractants of RPW adults.