Identity and pathogenicity of Rhizoctonia spp. associated with bare patch disease of cereals at a field site in Western Australia

Roots of seedlings of wheat and barley affected by bare patch disease at a field site in Western Australia were assessed for root damage and plated to isolate fungi. The patches were variable in shape and size and had the most severely affected plants in the centre. Of the 165 isolates ofRhizoctonia spp. obtained, 90% were multinucleate and 10% binucleate, the former being predominant in the plants at the centre of the patch. The relative frequency of binucleate isolates increased with proximity to the periphery. The increase in activity of avirulent binucleate isolates towards the periphery of the patch may be related to the sharp and abrupt edging of the patch. A variety of other species of fungi such asFusarium spp.,Mortierella spp.,Bipolaris sorokiniana, Pythium sp. andTrichoderma sp. were encountered within the patches. The multinucleate isolates belonging to anastomosis groups (Ag) 2–1, 2–2 and 8 (Thanatephorus cucumeris) were most pathogenic to wheat. The binucleate isolates of Ag C, D, E, and K (Ceratobasidium sp.) were less pathogenic. It is suggested that the bare patch disease is caused by a complex of root rot fungi composed of one or more anastomosis groups ofRhizoctonia spp. and other associated fungi.Samenvatting Van kiemplanten van tarwe en gerst, afkomstig van een met kale-plekkenziekte besmet perceel in West Australië werd de mate van wortelbeschadiging bepaald en werden schimmels uit de wortels geïsoleerd. De plekken waren verschillend van vorm en afmeting; de zwaarst aangetaste planten werden in het centrum ervan aangetroffen. Van de 165 verkregen isolaten vanRhizoctonia spp. was 90% meerkernig en 10% tweekernig. De meerkernige overheersten in de centra van de plekken. Relatief gezien nam het aantal tweekernige isolaten toe naarmate de herkomst dichter bij de periferie van de plekken was. De scherpe begrenzing van de ziekte aan de randen van de plekken zou in verband kunnen staan met het toenemen van de activiteit van de avirulente tweekernige isolaten in de nabijheid van de periferie van de plekken. Een aantal andere schimmels, zoalsFusarium spp.,Mortierella spp.,Bipolaris sorokiniana, Pythium sp. enTrichoderma sp. werd eveneens in de plekken aangetroffen. De meerkernige isolaten die tot de anastomosegroepen Ag 2–1, 2–2 en 8 (Thanatephorus cucumeris) behoren, waren voor tarwe het meest pathogeen. De tweekernige isolaten van de anastomosegroepen Ag C, D, E en K (Ceratobasidium sp.) waren minder pathogeen. Gesuggereerd wordt, dat de kale-plekkenziekte veroorzaakt wordt door een complex van verschillende wortelschimmels, die behoren tot een of meer anastomosegroepen vanR. solani en andere daarmee geassocieerde schimmels.     

Rhizosphere micro-organisms of seminal and nodal roots of wheat grown in pots

Wheat grown in Gabalong soil was examined for the microflora of its seminal and nodal root systems of similar age. At all stages of sampling, the seminal roots were found to support a significantly-larger population of bacteria, actinomycetes and fungi in their rhizosphere than the nodal roots. The seminal roots had higher numbers of bacteria and actinomycetes in their residues, but fungal numbers were not significantly different. The “rhizosphere effects” of the two root systems, in the combined analysis, were significantly different only for fungi. An interesting trend on both root systems was that while the numbers of bacteria, actinomycetes and fungi in the rhizosphere decreased with root age, their numbers in the residue increased with age.     

Effect of infection of seminal and nodal roots by the take-all fungus on tiller numbers and shoot weight of wheat

A simple technique is described for the separation of seminal and nodal roots of wheat grown in pots. The effect of infection of either of the root-systems of wheat by the take-all fungus on tiller numbers and shoot weight was investigated using a variation of the technique. Both root systems were necrosed by the introduced inoculum of the pathogen to which they were exposed when they were about 7 days old. Although infection of either of the root systems resulted in significant reduction of tiller numbers, only infection of nodal roots caused significant reduction of shoot weight.     

Development of a sequence-specific PCR marker linked to the Ku gene which removes the vernalization requirement in narrow-leafed lupin

Wild types of Lupinus angustifolius require vernalization to promote flowering. Modern domesticated cultivars carry the early-flowering gene Ku which removes this requirement. A microsatellite-anchored fragment length polymorphism marker was identified as co-segregating with the Ku gene in a recombinant inbred line (RIL) population derived from a domesticated × wild-type cross. DNA sequencing showed that the marker contained a 7 bp insertion/deletion polymorphism, as well as a single nucleotide polymorphism. A pair of sequence-specific primers was designed and successfully converted the size polymorphism into a simple polymerase chain reaction based co-dominant marker. This marker is closely linked to the Ku gene, as it co-segregates with the Ku phenotyping in a population consisting of 106 RILs.     

Use of soil solarization to control root rots in gerberas (Gerbera jamesonii)

Summary An investigation was conducted during the summer months of 1986–1987 and 1987–1988 in Western Australia to evaluate the effect of soil solarization on the control of root rot of gerbera an also on the microbial and nutrient status of the soil. Infested soil cores were sampled from a site where root-rot was a severe problem and were removed to a non-infested site where they were subjected to soil solarization or fumigation. Soil solarization resulted in reduced root rot (root disease index 28.6%) in comparison to the untreated control (52.0%) 8 months after planting. Plants in the fumigated plots had 15.8% less disease than those in solarized plots. Solarization increased the total numbers of bacteria and actinomycetes, and the proportion of bacteria and fungi antogonistic to Fusarium oxysporum, F. solani and Rhizoctonia solani. The proportion of actinomycetes antagonistic to these fungi, however, did not differ between solarized and control soil treatments. There was a significant reduction in disease in plants grown in infested fumigated soil to which a 10% concentration of solarized soil had been added, suggesting the development of microbial suppression in solarized soil. Phytophthora cryptogea was eradicated to 30 cm by solarization as well as by fumigation. Solarization eliminated R. solani but not F. oxysporum to a soil depth of 10 cm. Solarization increased the levels of NO _n3 ^– -N and NH₄ ⁺-N in soil, but did not affect the concentrations of PO₄ ^3–, K⁺, Fe²⁺, organic C and pH. Yield (as number of flowers per plant) was increased by soil solarization and by fumigation.Increased yields and decreased disease severity in the solarized plots could have been caused by (1) a reduction in the infectivity of the infested soils, (2) an increase in the suppressiveness of the soil, and (3) an increased available of plant nutrients.     

Actinomycetes in organic mulch used in avocado plantations and their ability to suppress Phytophthora cinnamomi

Actinomycetes isolated from the organic mulch used in avocado plantations in Western Australia were studied to examine their ability to suppress Phytophthora cinnamomi. All the 1600 isolates tested inhibited the pathogen in vitro with inhibition rates of >0.5. The inhibition rates achieved by actinomycetes isolated from fresh and pathogen-infested mulch were not significantly different, but the isolates tested differed in their ability to suppress the pathogen and/or the disease. Some of the isolates that inhibited the pathogen were also harmful to plant growth.     

Low root‐to‐root transmission of a tobamovirus,yellow tailflower mild mottle virus,and resilience of its virions

Tobamoviruses are serious pathogens because they have extremely stable virions, they are transmitted by contact, and they often induce severe disease in crops. Knowledge of the routes of transmission and resilience of tobamovirus virions is essential in understanding the epidemiology of this group of viruses. Here, an isolate of the tobamovirus yellow tailflower mild mottle virus (YTMMV) was used to examine root‐to‐root transmission in soil and in a hydroponic growth environment. Root‐to‐root transmission occurred rarely, and when it occurred plants did not exhibit systemic movement of the virus from the roots to the shoots over a 30‐day period. The resilience of YTMMV virions was tested in dried leaf tissue over time periods from one hour to one year under temperatures ranging from ?80 to 160 °C. Infectivity was maintained for at least a year when incubated at ?80 or 22 °C, or at fluctuating ambient temperatures of 0.8 to 44.4 °C, but incubation under dry conditions at 160 °C for >4 days eliminated infectivity. Exposure of virions to 0.1 m sodium hydroxide or 20% w/v skimmed milk solution for 30 min, treatments recommended for tobamovirus inactivation, did not abolish infectivity of YTMMV.     

Both incidence and severity of white rust disease reflect host resistance in Brassica juncea germplasm from Australia,China and India

White rust (Albugo candida) is a highly destructive disease of oilseed Brassicas such as Brassica juncea and B. rapa, and has caused serious yield losses in Australia, China and India on both species. The first commercial B. juncea varieties are now being deployed in Australia, but their response to Australian strains of A. candida is yet to be defined under Australian field conditions. To identify useful sources of host resistance for Australia, China and India, in B. juncea, three field trials were undertaken in Western Australia. Forty-four B. juncea genotypes, viz. 22 from India, 12 from Australia and 10 from China, were tested. Varying levels of host resistance to Australian strains of A. candida (race 2) were identified among the genotypes from the three countries. Genotypes CBJ-001, CBJ-003 and CBJ-004 from China consistently showed high levels of resistance to A. candida on leaves across the three trials. Overall, the genotypes from China showed the best resistance, followed by the genotypes from Australia, with those from India being the most susceptible. The most susceptible genotypes were RL1359, RH30 and Seetha from India. It is noteworthy that both the incidence and severity of disease reflected varying levels of host resistance in the germplasm from the three countries, irrespective of whether screening was undertaken in the field using natural or artificial inoculation. Differentiation of resistance among these genotypes was similar to that we reported previously for artificially-inoculated seedlings or adult plants under glasshouse conditions, indicating that a choice of options is available to plant breeders to reliably differentiate host resistance among genotypes to white rust in B. juncea.     

Bacterial antagonists to the take-all fungus and fluorescent pseudomonads in the rhizosphere of wheat

The numbers of antagonists to the take-all fungus, and of fluorescent pseudomonads were significantly different in the rhizosphere and “residue” of seminal and nodal wheat roots of similar age.The rhizosphere of 1 week-old and the residues of 3 and 5 week-old nodal roots harboured significantly more antagonists than seminal roots. The rhizosphere of 5 week-old seminal roots, however, supported more antagonists than that of nodal roots of similar age. Combined analysis of all sampling stages showed that the nodal roots exerted a significantly greater “rhizosphere effect” on antagonists than the seminals.Fluorescent pseudomonads in the rhizosphere of 1, 3 and 8 week-old seminal roots were present in significantly higher numbers than in nodal roots of similar age. The combined analysis of all stages showed that the rhizosphere of seminal roots supports a significantly larger population of fluorescent pseudomonads.The implication of these differences is discussed in relation to the ecology of the take-all fungus.