Characterization and PCR-based Typing of Xanthomonas campestris pv. vesicatoria from Peppers and Tomatoes in Serbia

During the last two decades bacterial strains associated with necrotic leaf spots of pepper and tomato fruit spots were collected in Serbia. Twenty-eight strains isolated from pepper and six from tomato were characterized. A study of their physiological and pathological characteristics, and fatty acid composition analysis revealed that all of the strains belong to Xanthomonas campestris pv. vesicatoria. Being non-amylolytic and non-pectolytic, pathogenic on pepper but not on tomato, containing lower amounts of fatty acid 15 : 0 ante–iso, the pepper strains were designated as members of the A group of X. campestris pv. vesicatoria. However, the tomato strains hydrolyzed starch and pectate, caused compatible reactions on tomato but not on pepper, had higher percent of 15 : 0 ante–iso fatty acid, and were classified into B phenotypic group and identified as X. vesicatoria. PCR primers were developed which amplified conserved DNA regions related to the hrp genes of different strains of X. campestris pv. vesicatoria associated with pepper and tomato. Restriction analysis of the PCR product resulted in different patterns and enabled grouping of the strains into four groups. When xanthomonads isolated from pepper and tomato in Serbia were analyzed, they clustered into two groups corresponding to the grouping based on their physiological and pathological characteristics. According to the reaction of pepper and tomato differential varieties, the strains from pepper belong to races P7 and P8 and tomato strains belong to the race T2. All strains were sensitive to copper and streptomycin. Advantages and disadvantages of various bacterial spot management practices are discussed.     

Footsteps from Insect Larvae Damage Leaf Surfaces and Initiate Rapid Responses

Plant resistance to insect herbivory involves gene expression in response to wounding and the detection of insect elicitors in oral secretions (Kessler and Baldwin, 2002, Ann. Rev. Plant/ Biol. 53: 299–328). However, crawling insect larvae stimulate the synthesis of 4-aminobutyrate within minutes and imprints of larval footsteps can be visualized within seconds through superoxide production or transient increases in chlorophyll fluorescence (Bown et al., 2002, Plant Physiol. 129: 1430–1434). Here cryo-scanning electron microscopy was used to demonstrate that larval feet, which are equipped with a perimeter row of hook-like crochets, damage leaf tissue and result in larval footprints. Staining for cell death shows that areas of wounding correspond to footsteps detected through increased chlorophyll fluorescence. Superoxide production in response to footsteps was inhibited by diphenyleneiodonium, an inhibitor of the plasma membrane NADPH oxidase enzyme. Inhibition of superoxide production, however, did not eliminate the detection of cell death. The results demonstrate that larval footsteps damage leaf tissue, and initiate rapid local responses which are not dependent on herbivory or oral secretions. It is proposed that superoxide production at the wound site prevents opportunistic pathogen infection.     

Effect of temperature on bulb growth capacity and sensitivity to summer sprouting in Lilium longiflorum Thunb.

The production of Lilium longiflorum bulbs in The Netherlands, with its cool climate, has been a problem because of unsatisfactory bulb growth and the risk of premature sprouting of the daughter bulbs (summer sprouting). To investigate the possibilities of breeding a type of L. longiflorum that can be grown under cool climatic conditions, a collection of 27 L. longiflorum cultivars from Japan, The Netherlands and the United States was tested, together with two Asiatic hybrids and a L. speciosum cultivar, under low phytotron temperatures (10, 14, 17°C) and in field experiments.‘Mount Everest’, ‘Saeki’, ‘Indian Summer’ and ‘White American’ were among the best L. longiflorum cultivars, with less than 20% summer sprouting and good bulb production. This was in contrast to ‘Hinomoto’, ‘Ace’ and some American introductions, which showed more than 60% summer sprouting and low bulb production. The lower the phytotron temperature, the more summer sprouting occurred. The differences observed between the cultivars in the field experiments were in agreement with those observed in the phytotron. The genetic variation proved large enough to start a breeding program for L. longiflorum adapted to cool climate conditions.     

Phosphorus removal in a marine prototype, recirculating aquaculture system

Phosphorus dynamics were examined in a prototype, zero-discharge, marine-recirculating system. Operation of the system without discharge of water and sludge was enabled by recirculation of effluent water through two separate treatment loops. Surface water from the fish basin was pumped over a trickling filter in one loop, while bottom-water was recirculated through a sedimentation basin followed by a fluidized bed reactor in the other treatment loop. Ammonia oxidation to nitrate in the trickling filter and organic matter digestion together with nitrate reduction in the sedimentation basin and fluidized bed reactor were the main biological features of this treatment system. Orthophosphate concentrations did not exceed 15 mg PO₄–P/l in the culture water during more than 1 year of system operation. Much of the phosphorus was retained within the sedimentation basin and fluidized bed reactor. In these treatment stages, the phosphorus content of organic matter was as high as 17.5% and 19%, respectively. High concentrations of total phosphorus and low concentrations of soluble orthophosphate were measured in the initial stages of sedimentation under oxic and anoxic conditions, suggesting that most of the phosphorus was associated with organic matter. Depletion of oxygen and nitrate in the sludge layers of the sedimentation basin coincided with sulfate reduction to sulfide and a release of soluble orthophosphate. The observed phosphorus dynamics in this marine system supported findings from previous studies in which it was demonstrated that denitrifiers underlie phosphorus immobilization under these conditions.     

Nubbing of Coral Colonies: A Novel Approach for the Development of Inland Broodstocks

The establishment of large numbers of ramets from any individual coral genet can be used as a valuable source of material for the trade in ornamental marine organisms and in physiological and ecotoxicological studies. Here we discuss the rationale and the applicability of rearing ex situ large numbers of nubbins (minute fragments, down to the size of a single polyp). Nubbins taken from colonies of the branching Red Sea coral Stylophora pistillata show high survivorship under ex situ conditions and fast growth rates (5- to 6-fold increase in polyp numbers within 3 months) of the basal plates which revealed a significant correlation between tissue surface area and polyp numbers. Nubbins from branch tips and mid branches grew at a similar rate, but growth was affected by different light regimens. This approach requires further experimentation to elucidate optimal conditions.     

Atmospheric carbon injection linked to end-Triassic mass extinction

The end-Triassic mass extinction (~201.4 million years ago), marked by terrestrial ecosystem turnover and up to ~50% loss in marine biodiversity, has been attributed to intensified volcanic activity during the break-up of Pangaea. Here, we present compound-specific carbon-isotope data of long-chain n-alkanes derived from waxes of land plants, showing a ~8.5 per mil negative excursion, coincident with the extinction interval. These data indicate strong carbon-13 depletion of the end-Triassic atmosphere, within only 10,000 to 20,000 years. The magnitude and rate of this carbon-cycle disruption can be explained by the injection of at least ~12 × 10(3) gigatons of isotopically depleted carbon as methane into the atmosphere. Concurrent vegetation changes reflect strong warming and an enhanced hydrological cycle. Hence, end-Triassic events are robustly linked to methane-derived massive carbon release and associated climate change.     

Fungal biomass in pastures increases with age and reduced N input

Previous studies have shown that soil fungal biomass increases towards more natural, mature systems. Shifts to a fungal-based soil food web have previously been observed with abandonment of agricultural fields and extensification of agriculture. In a previous field experiment we found increased fungal biomass with reduced N fertilisation. Here, we explore relationships between fungi, bacteria, N input and grassland age on real dairy farms in the Netherlands. We hypothesised that also in pastures that are still in production there is a negative relationship between fungal biomass and fertilisation, and that fungal biomass increases with grassland age in pastures that are still in production. We expected the fungal/bacterial biomass ratio to show the same responses, as this ratio has often been used as an indicator for management changes. We sampled 48 pastures from eight organic dairy farms. Sites differed in age and fertilisation rate. We determined fungal and bacterial biomass, as well as ergosterol (a fungal biomarker). Fungal and bacterial biomass and ergosterol, showed a negative relationship with N application rate, and correlated positively with organic matter percentage. In old pastures, fungal biomass and ergosterol were higher than in younger pastures. Because bacterial biomass responded in the same way as fungal biomass, the F/B ratio remained constant, and can therefore—in our data set—not be used as an indicator for changing management. We conclude that the changes in fungal and bacterial biomass were driven by changes in organic matter quality and quantity. The negative relationship we found between N application rate and fungal biomass adds to earlier work and confirms the presence of this relationship in pastures with relatively small differences in management intensities. Earlier studies on shifts in fungal biomass focused on ex-agricultural fields or restoration projects. Here we show that fungal biomass is also higher in older agricultural pastures.     

2002年花卉丰收年

虽然2002年距今已有一段时间了,但回过头去看看,我们能得出个结论,那就是对花卉种植者来说,2002年是一个丰收年。通过对荷兰花卉拍卖市场最可靠的统计数据分析,我们发现,2002年花卉的平均价格有了明显提高。如果我们将1995年之前20多年的花卉价格与2002年全年的平均价格比较,可以看出,在1968到1995的27年间,花卉的平均价格几乎没有改变。而且1995年的花卉价格与今天的价格相比也存在着巨大的差异,比现在的价格低很多一。     

Pseudomonas syringae pv. coryli, the Causal Agent of Bacterial Twig Dieback of Corylus avellana

ABSTRACT Thirty-eight bacterial strains isolated from hazelnut (Corylus avellana) cv. Tonda Gentile delle Langhe showing a twig dieback in Piedmont and Sardinia, Italy, were studied by a polyphasic approach. All strains were assessed by fatty acids analysis and repetitive sequence-based polymerase chain reaction (PCR) fingerprinting using BOX and ERIC primer sets. Representative strains also were assessed by sequencing the 16S rDNA and hrpL genes, determining the presence of the syrB gene, testing their biochemical and nutritional characteristics, and determining their pathogenicity to hazelnut and other plants species or plant organs. Moreover, they were compared with reference strains of other phytopathogenic pseudomonads. The strains from hazelnut belong to Pseudomonas syringae (sensu latu), LOPAT group Ia. Both fatty acids and repetitive-sequence-based PCR clearly discriminate such strains from other Pseudomonas spp., including P. avellanae and other P. syringae pathovars as well as P. syringae pv. syringae strains from hazelnut. Also, the sequencing of 16S rDNA and hrpL genes differentiated them from P. avellanae and from P. syringae pv. syringae. They did not possess the syrB gene. Some nutritional tests also differentiated them from related P. syringae pathovars. Upon artificial inoculation, these strains incited severe twig diebacks only on hazelnut. Our results justify the creation of a new pathovar because the strains from hazelnut constitute a homogeneous group and a discrete phenon. The name of P. syringae pv. coryli is proposed and criteria for routine identification are presented.