Morpho-physio and anatomical characterization of the indigenous Himalayan crabapple: Malus baccata (L.) Borkh. (Rohru) and exotic Malus pumila Mill. for dwarfing traits

Genetic Resources and Crop Evolution - The wild Malus germplasm is considered as a gene reservoir for various biotic and abiotic stresses tolerance/resistance genes, including important novel...     

Genetic analysis and pyramiding of two gall midge resistance genes (Gm-2 and Gm-6t) in rice ( Oryza sativa L.)

Asian rice gall midge (Orseolia oryzae) is a major pest across much of south and southeast Asia. This pest is genetically diverse and many gall midge biotypes are known to exist in each country. During the last three decades, host plant resistance has proved to be the most effective mechanism of controlling the Asian rice gall midge. Seven genes conditioning resistance to gall midge larvae have been identified in rice (Oryza sativa) and are being used in cultivar improvement programs. However, some of these genes are rendered ineffective by new gall midge biotypes. Increased understanding of genetics, inheritance, allelic relationships and linkage is necessary to maximise the durability of major gene resistance by the pyramiding of these genes. The two genes, Gm-2 and Gm-6(t), are known to confer resistance against a number of biotypes in India and China, respectively. An F₃ population derived from a cross between Duokang #1 (donor of Gm-6(t)) and Phalguna (donor of Gm-2) was screened against Chinese gall midge biotype 4 at Guangdong, China, and Indian gall midge biotype 1 at Raipur, India. At each location, separately,a single gene governed resistance. The parallel segregation of 417 F₃progenies for both biotypes at two locations revealed that recombination had occurred between the two genes, establishing that the two genes are not allelic. However, the two genes Gm-2 and Gm-6(t), were found to be linked with a distance of ∼16.3 cM. A number of lines homozygous at one locus and segregating for the other locus were identified and selected. These lines were selfed to obtain lines homozygous for the favourable alleles at both loci (two locus pyramids). This is the first report on use of conventional host-pest interaction method for pyramiding two closely located Gm-resistance loci of dissimilar effects. The implications of deployment of these pyramids within and across country borders, with reference to the prevailing gall midge populations are discussed. This revised version was published online in August 2006 with corrections to the Cover Date.     

Composition and diversity of five major forest types in moist temperate climate of the western Himalayas

The present study was undertaken in five major forest types (dominated by Quercus semecarpifolia, Quercus floribunda, Acer acuminatum, Abies pindrow and Aesculus indica, respectively) between 2400 and 2850 m a.s.l. in a moist temperate forest of the Mandal-Chopta area in the Garhwal region of Uttarakhand, India. The aim was to assess the variation in composition and diversity in different vegetation layers, i.e., herb, shrub and tree, among these five forest types. Diversity indices, such as the Shannon-Wiener diversity index, density, total basal cover, Simpson’s concentration of dominance index, Simpson’s diversity index, Pielou’s equitability, species richness, species heterogeneity and β-diversity, were calculated to understand community structures. Dominance-diversity curves were drawn to ascertain resource apportionment among various species in different forest types.     

Molecular epidemiological survey of benign Theileria parasites of cattle in Japan: detection of a new type of major piroplasm surface protein gene

Benign Theileria species of cattle are found in most parts of the world. The major piroplasm surface protein (MPSP), a conserved protein in all Theileria species, has been used as a maker for epidemiological and phylogenetical studies of benign Theileria species. Parasites with Ikeda- or Chitose-type MPSP genes are dominant in Japan, but we report here mixed infection cases of Theileria parasites with an additional MPSP type parasite infecting cattle in Abashiri District, Hokkaido. The MPSP gene sequence found in the additional type was closely related to MPSP genes of Theileria parasites found in Southeast Asian countries, including Thailand (Narathiwat) and Indonesia (Java). Theileria parasites from the blood sample were also distinguishable from the Ikeda or Chitose type parasites by the small subunit (SSU) rRNA gene sequence analysis, and they are grouped into the SSU rRNA types C/D found in Korea, North America, and Spain. The present finding of mixed infections of cattle with three different types of Theileria makes epidemiological feature of bovine theileriosis in Japan more complex. We have designed a set of primers specific to this MPSP type in order to conduct further epidemiological study.     

Forest utilization patterns and socio-economic status of the Van Gujjar tribe in sub-Himalayan tracts of Uttarakhand, India

The present study was conducted on the Van Gujjar tribe inhabiting a sub-Himalayan tract in the North Western Himalayas of Uttarakhand State,India.The Van Gujjars have been practicing transmigration over hundreds of years.They migrate each year with their households and livestock between summer and winter pastures.A few years ago with the announcement of the establishment of the Rajaji National Park,the tribe has been forced out of the forest area and rehabilitated outside the park,which has affected their lifestyle.The newly established rehabilitation colony in the Gandikhata area of Haridwar District of Uttarakhand State was taken as a case study.The aims of the present study were to understand and evaluate the socio-economic status of the Van Gujjars in their newly established rehabilitation colony,the utilization pattern of forest resources by the tribe and their relative preference for selective trees for various uses.A total of 176 households were interviewed (giving equal weight to all economic classes and family every size) by using pre-structured questionnaires.The education level was very low (12.9%) and the average income per household was recorded as Rs.36000 (approximately $ 803) per year.The major source of income was dairy production (80.6%) followed by labor employment (13.9%),NTFPs (4.2%) and agricultural production (1.4%).More than 90% of fuel wood and fodder is extracted from the forest.The average fuel wood and fodder consumptions per household per day were recorded as 25.86 and 21.58 kg,respectively.A total of 35 species of cultivated plants and 89 species of wild plants were found to be utilized as food sources.Selectively 25 wild tree species are well known as being used by the Van Gujjars as fodder,fuel wood,agricultural implements,household articles,dye,medicine,fiber and other products.According to their utility value,the most preferred and useful tree species is Ougeinia oojeinensis,followed by Terminalia alata,Bombax ceiba,Shorea robusta and Dalbergia sissoo.     

Effect of long‐term fertilization and manuring on potassium release properties in a Typic Ustochrept

A long‐term fertilizer experiment, over 27 years, studied the effect of mineral fertilizers and organic manures on potassium (K) balances and K release properties in maize‐wheat‐cowpea (fodder) cropping system on a Typic Ustochrept. The treatments consisted of control, 100% nitrogen (100% N), 100% nitrogen and phosphorus (100% NP), 50% nitrogen, phosphorus, and potassium (50% NPK), 100% nitrogen, phosphorus, and potassium (100% NPK), 150% nitrogen, phosphorus, and potassium (150% NPK), and 100% NPK+farmyard manure (100% NPK+FYM). Nutrients N, P, and K in 100% NPK treatment were applied at N: 120 kg ha^—1, P: 26 kg ha^—1, and K: 33 kg ha^—1 each to maize and wheat crops and N: 20 kg ha^—1, P: 17 kg ha^—1, and K: 17 kg ha^—1 to cowpea (fodder). In all the fertilizer and manure treatments removal of K in the crop exceeded K additions and the total soil K balance was negative. The neutral 1 N ammonium acetate‐extractable K in the surface soil (0—15 cm) ranged from 0.19 to 0.39 cmol kg^—1 in various treatments after 27 crop cycles. The highest and lowest values were obtained in 100% NPK+FYM and 100% NP treatments, respectively. Non‐exchangeable K was also depleted more in the treatments without K fertilization (control, 100% N, and 100% NP). Parabolic diffusion equation could describe the reaction rates in CaCl₂ solutions. Release rate constants (b) of non‐exchangeable K for different depth of soil profile showed the variations among the treatments indicating that long‐term cropping with different rates of fertilizers and manures influenced the rate of K release from non‐exchangeable fraction of soil. The b values were lowest in 100% NP and highest in 100% NPK+FYM treatment in the surface soil. In the sub‐surface soil layers (15—30 and 30—45 cm) also the higher release rates were obtained in the treatments supplied with K than without K fertilization indicating that the sub‐soils were also stressed for K in these treatments.     

Identification of potential sources of mungbean yellow mosaic India virus resistance in black gram (Vigna mungo) and expression of antioxidants and R-genes modulating resistance response in cultivated and its two wild relatives

Black gram is one of the most important short duration grain legume, which contributes significantly towards nutritional security and environmental sustainability. The virus specific primers confirms the presence of mungbean yellow mosaic India virus (MYMIV) in representative samples. A total of 27 cultivated and two wild species were found as highly resistant (HR) to MYMIV and validated through molecular markers. The start codon target (SCoT) markers analysis revealed that the SCoT loci, namely, SCoT-4 (2200 bp), SCot-9 (1150/ 1200 bp), SCoT-15 (1150/1100 bp), SCoT-16 (700 bp), SCoT-24 (2500 bp), SCoT-25 (700 bp), SCoT-33 (900/1000 bp), and SCoT-34 (600 bp), were found unique, able to distinguish HR and highly susceptible (HS) genotypes. Biochemical characterization and gene expression profiling revealed the higher expression of antioxidants and R-genes just after pathogen inoculation indicated the activation of defence mechanism in both cultivated and its wild relatives, which modulates the resistant responses in cultivated and wild accessions. These information will be really helpful in accelerating resistance breeding in black gram.     

Water use in rice crop through different methods of irrigation in a sodic soil

Sodic soils are characterized by high exchangeable sodium on exchange sites, soil pH greater than 8.5, relatively low electrical conductivity, low infiltration rate and dispersed clay. These characteristics restrict the capacity of soil to absorb water, resulting in poor infiltration. Evidently, these soils require application of irrigation water at shorter intervals for crop production. Thus, irrigation strategy for sodic soils differs from that of normal soils. An experiment to determine the suitable irrigation strategy along with methods of application namely: surface (farmer’s practice), sprinkler (double nozzle impact sprinkler), and low-energy water application device (LEWA) were initiated in the year 2012 for rice crop. Irrigation depths of 6 cm in case of surface method and 4 cm in case of sprinkler and LEWA methods were applied at each irrigation event. The irrigation events for rice were scheduled at 2-DAD (days after the disappearance of the ponded water), 3-DAD, and 4-DAD through surface method, and at daily, 1- and 2-day intervals (after initial ponding disappeared) by sprinkler and LEWA methods. Sprinkler and LEWA methods resulted in highest rice yield of 4.4 t ha^?1 in irrigated plots at the 2-day interval which was at par with the highest yielding surface-irrigated plot scheduled at 2-DAD. At the same time, irrigation strategy of 2-day interval through sprinkler and LEWA methods registered water saving to the extent of 30–40% over 2-DAD under surface irrigation method. Results revealed that there could be substantial saving of water and energy (electricity and diesel) through the use of sprinkling devices for irrigating rice under sodic soil environments.     

Maternal salinity environment affects salt tolerance during germination in Anabasis setifera: A facultative desert halophyte

The effects of maternal salinity and light incubation on the salinity tolerance of the facultative halophyte Anabasis setifera during their germination stages were assessed. Seeds were collected from non-saline habitats in Egypt and saline habitats in the United Arab Emirates(UAE). The seeds of the two populations were germinated in 0, 100, 200, 400, 600 and 800 m M Na Cl, and incubated at 25°C/15°C in both 12-h light and 12-h darkness regimes and continuous darkness. Significantly more seeds germinated in the Egyptian population than in the UAE population. Salinity tolerance was significantly greater with the Egyptian population than with the UAE population, especially under the conditions of higher salinities. The difference in salinity tolerance between the seeds of two populations was attributed to their seed mass. In addition, germination was significantly faster for the Egyptian population than for the UAE population. Most of the saline treated seeds were able to recover their germination when transferred to distilled water, but this depended on their maternal salinity and light incubation. Recovery from higher salinities was significantly better for the seeds under darkness than for those under light in the UAE population, but the reverse was true for the seeds in the Egyptian population. The higher salinity tolerance for the A. setifera seeds from the non-saline Egyptian population and the lower salinity tolerance for the seeds from the saline UAE population cannot explain their natural distribution. Further studies about other possible roles, such as levels of different promoting and inhibiting phytohormones, are needed to understand the importance of salinity as an environmentally induced maternal effect.