Some determinants of the spatio-temporal fire cycle in a mediterranean landscape (Corsica,France)

Based on recent needs to accurately understand fire regimes and post-fire vegetation resilience at a supra-level for carbon cycle studies, this article focusses on the coupled history of fire and vegetation pattern for 40 years on a fire-prone area in central Corsica (France). This area has been submitted since the beginning of the 20^th century to land abandonment and the remaining land management has been largely controlled by frequent fires. Our objectives were to rebuild vegetation and fire maps in order to determine the factors which have driven the spatial and temporal distribution of fires on the area, what were the feed backs on the vegetation dynamics, and the long-term consequences of this inter-relationship. The results show a stable but high frequency of small fires, coupled with forest expansion over the study period. The results particularly illustrate the spatial distribution of fires according to topography and vegetation, leading to a strong contrast between areas never burnt and areas which have been burnt up to 7 times. Fires, when occuring, affect on average 9 to 12% of the S, SE and SW facing slopes (compared to only 2 to 5% for the N facing slopes), spread recurrently over ridge tops, affect all the vegetation types but reburn preferentially shrublands and grasslands. As these fire-proning parameters have also been shown to decrease the regeneration capacity of forests, this study highlights the needs in spatial studies (both in terms of fire spread and vegetation dynamic) to accurately apprehend vegetation dynamic and functionning in fire-prone areas.This revised version was published online in May 2005 with corrections to the Cover Date.     

Carbon Depletion by Plowing and its Restoration by No‐Till Cropping Systems in Oxisols of Subtropical and Tropical Agro‐Ecoregions in Brazil

The continuous use of plowing for grain production has been the principal cause of soil degradation. This project was formulated on the hypothesis that the intensification of cropping systems by increasing biomass‐C input and its biodiversity under no‐till (NT) drives soil restoration of degraded agro‐ecosystem. The present study conducted at subtropical [Ponta Grossa (PG) site] and tropical regions [Lucas do Rio Verde, MT (LRV) site] in Brazil aimed to (i) assess the impact of the continuous plow‐based conventional tillage (CT) on soil organic carbon (SOC) stock vis‐à‐vis native vegetation (NV) as baseline; (ii) compare SOC balance among CT, NT cropping systems, and NV; and (iii) evaluate the redistribution of SOC stock in soil profile in relation to soil resilience. The continuous CT decreased the SOC stock by 0·58 and 0·67 Mg C ha⁻¹ y⁻¹ in the 0‐ to 20‐cm depth at the PG and LRV sites, respectively, and the rate of SOC sequestration was 0·59 for the PG site and ranged from 0·48 to 1·30 Mg C ha⁻¹ y⁻¹ for the LRV site. The fraction of C input by crop residues converted into SOC stock was ~14·2% at the PG site and ~20·5% at the LRV site. The SOC resilience index ranged from 0·29 to 0·79, and it increased with the increase in the C input among the NT systems and the SOC sequestration rates at the LRV site. These data support the hypothesis that NT cropping systems with high C input have a large potential to reverse the process of soil degradation and SOC decline. Copyright © 2013 John Wiley & Sons, Ltd.     

Comparison of the Sensitivity of Landscape-fire-succession Models to Variation in Terrain, Fuel Pattern, Climate and Weather

The purpose of this study was to compare the sensitivity of modelled area burned to environmental factors across a range of independently-developed landscape-fire-succession models. The sensitivity of area burned to variation in four factors, namely terrain (flat, undulating and mountainous), fuel pattern (finely and coarsely clumped), climate (observed, warmer & wetter, and warmer & drier) and weather (year-to-year variability) was determined for four existing landscape-fire-succession models (EMBYR, FIRESCAPE, LANDSUM and SEM-LAND) and a new model implemented in the LAMOS modelling shell (LAMOS(DS)). Sensitivity was measured as the variance in area burned explained by each of the four factors, and all of the interactions amongst them, in a standard generalised linear modelling analysis. Modelled area burned was most sensitive to climate and variation in weather, with four models sensitive to each of these factors and three models sensitive to their interaction. Models generally exhibited a trend of increasing area burned from observed, through warmer and wetter, to warmer and drier climates with a 23-fold increase in area burned, on average, from the observed to the warmer, drier climate. Area burned was sensitive to terrain for FIRESCAPE and fuel pattern for EMBYR. These results demonstrate that the models are generally more sensitive to variation in climate and weather as compared with terrain complexity and fuel pattern, although the sensitivity to these latter factors in a small number of models demonstrates the importance of representing key processes. The models that represented fire ignition and spread in a relatively complex fashion were more sensitive to changes in all four factors because they explicitly simulate the processes that link these factors to area burned. The US Government's and the Canadian Government's right to retain a non-exclusive, royalty-free license is acknowledged     

Hepatitis E virus chronic infection of swine co-infected with Porcine Reproductive and Respiratory Syndrome Virus

In developed countries, most of hepatitis E human cases are of zoonotic origin. Swine is a major hepatitis E virus (HEV) reservoir and foodborne transmissions after pork product consumption have been described. The risk for HEV-containing pig livers at slaughter time is related to the age at infection and to the virus shedding duration. Porcine Reproductive and Respiratory Syndrome Virus (PRRSV) is a virus that impairs the immune response; it is highly prevalent in pig production areas and suspected to influence HEV infection dynamics. The impact of PRRSV on the features of HEV infections was studied through an experimental HEV/PRRSV co-infection of specific-pathogen-free (SPF) pigs. The follow-up of the co-infected animals showed that HEV shedding was delayed by a factor of 1.9 in co-infected pigs compared to HEV-only infected pigs and specific immune response was delayed by a factor of 1.6. HEV shedding was significantly increased with co-infection and dramatically extended (48.6 versus 9.7 days for HEV only). The long-term HEV shedding was significantly correlated with the delayed humoral response in co-infected pigs. Direct transmission rate was estimated to be 4.7 times higher in case of co-infection than in HEV only infected pigs (0.70 and 0.15 per day respectively). HEV infection susceptibility was increased by a factor of 3.3, showing the major impact of PRRSV infection on HEV dynamics. Finally, HEV/PRRSV co-infection – frequently observed in pig herds – may lead to chronic HEV infection which may dramatically increase the risk of pig livers containing HEV at slaughter time.

Electronic supplementary material

The online version of this article (doi:10.1186/s13567-015-0207-y) contains supplementary material, which is available to authorized users.     

Quantifying and simulating carbon and nitrogen mineralization from diverse exogenous organic matters

The potential contributions of exogenous organic matters (EOMs) to soil organic C and mineral N supply depend on their C and N mineralization, which can be assessed in laboratory incubations. Such incubations are essential to calibrate decomposition models, because not all EOMs can be tested in the field. However, EOM incubations are resource-intensive. Therefore, easily measurable EOM characteristics that can be useful to predict EOM behaviour are needed. We quantified C and N mineralization during the incubation of 663 EOMs from five groups (animal manures, composts, sewage sludges, digestates and others). This represents one of the largest and diversified set of EOM incubations. The C and N mineralization varied widely between and within EOM subgroups. We simulated C and N mineralization with a simple generic decomposition model. Three calibration methods were compared. Individual EOM calibration of the model yielded good model performances, while the use of a unique parameter set per EOM subgroup decreased the model performance, and the use of two EOM characteristics to estimate model parameters gave an intermediate model performance (average RMSE-C values of 32, 99 and 65 mg C g⁻¹ added C and average RMSE-N values of 50, 126 and 110 mg N g⁻¹ added N, respectively). Because of the EOM variability, individual EOM calibration based on incubation remains the recommended method for predicting most accurately the C and N mineralization of EOMs. However, the two alternative calibration methods are sufficient for the simulation of EOMs without incubation data to obtain reasonable model performances.     

Treatment of Hydroponics Wastewater Using Constructed Wetlands in Winter Conditions

Hydroponics culture generates large amounts of wastewater that are highly concentrated in nitrate and phosphorus but contains almost no organic carbon. Constructed wetlands (CWs) have been proposed to treat this type of effluent, but little is known about the performance of these systems in treating hydroponic wastewater. In addition, obtaining satisfactory winter performances from CWs operated in cold climates remains a challenge, as biological pathways are often slowed down or inhibited. The main objective of this study was to assess the effect of plant species (Typha sp., Phragmites australis, and Phalaris arundinacea) and the addition of organic carbon on nutrient removal in winter. The experimental setup consisted of 16 subsurface flow CW mesocosms (1 m², HRT of 3 days) fed with 30 L?d¹ of synthetic hydroponics wastewater, with half of the mesocosms fed with an additional source of organic carbon (sucrose). Carbon addition had a significant impact on nitrate and phosphate removal, with removal means of 4.9 g m^-2?d^-1 of NO₃-N and 0.5 g m^-2 d^-1 of PO₄-P. Planted mesocosms were generally more efficient than unplanted controls. Furthermore, we found significant differences among plant treatments for NO₃-N (highest removal with P. arundinacea) and COD (highest removal with P. australis/Typha sp.). Overall, planted wetlands with added organic carbon represent the best combination to treat hydroponics wastewater during the winter.     

Use of scanning electron microscopy to investigate dental calculus in dogs

The formation of dental calculus in dogs is a major problem. Scanning electron microscopy of tartar specimens from dogs revealed on the outer surface of the plaque polymorphic configurations, more or less arranged as free filaments, corn-cobs or swab-like structures. Uninhabited bacterial recesses were found on the inner surface of the calculus. Calcification may occur between or within the bacteria. Elucidating the mechanisms of calculus formation should help in the development of prophylactic measures.     

In vitro conservation of tropical plant germplasm — a review

Summary In vitro medium term conservation of tropical plant germplasm is used routinely in many laboratories. Growth reduction is achieved by modifying various parameters, such as temperature, culture medium, gaseous environment. For long term conservation, cryopreservation (i.e. storage in liquid nitrogen, –196°C) is the only current method available. Each successive step of the process requires precise conditions which have to be defined for each material. Cryopreservation protocols have been set up for more than 40 tropical species. Results obtained with various culture systems such as cell suspensions, protoplasts, calluses, meristems and embryos are discussed. The first example of the large scale application of cryopreservation (oil palm somatic embryos) is presented.     

Cosmic ray-produced radionuclides as tracers of atmospheric precipitation processes

Through recent developments in instrumental analysis it is now possible to measure with good precision the rainwater concentrations of five short-lived radionuclides which are produced by cosmic ray spallation of atmospheric argon. These measurements provide a method for studying the in-cloud nucleation times and aerosol scavenging efficiencies, and promise to provide information onshort-term processes which occur in rain and snow formation.     

Phonon dispersions of fcc delta-plutonium-gallium by inelastic x-ray scattering

We report an experimental determination of the phonon dispersion curves in a face-centered cubic (fcc) delta-plutonium-0.6 weight % gallium alloy. Several unusual features, including a large elastic anisotropy, a small-shear elastic modulus C', a Kohn-like anomaly in the T1[011] branch, and a pronounced softening of the [111] transverse modes, are found. These features can be related to the phase transitions of plutonium and to strong coupling between the lattice structure and the 5f valence instabilities. Our results also provide a critical test for theoretical treatments of highly correlated 5f electron systems as exemplified by recent dynamical mean field theory calculations for delta-plutonium.