The release of silicon from amorphous silica and rice straw in Sri Lankan soils

Silicon release from rice straw and amorphous silica when shaken in solution with five Sri Lankan soils was studied indirectly using sorption isotherms and changes in concentration and directly using straw in dialysis bags examined using electron microscopy. The aim was to further our understanding of the processes and factors affecting the release of straw-Si in soils and its availability to rice. The soils (alfisols and ultisols) shaken with 0.1 M NaCl (5 g per 125 mL for 250 days) produced concentrations of 1–4 mg L⁻¹ of monosilicic acid-Si. Amorphous silica added to these suspensions (36.5 mg, containing 17 mg Si) raised the concentrations to 20–40 mg L⁻¹, and added rice straw (0.5 g, containing 17 mg Si) gave 10–25 mg L⁻¹. Sorption isotherms (7 days equilibrations) were used to calculate from the concentrations the amounts of Si released (24–38% and 8–21%, respectively). Both materials gave about 40 mg L⁻¹ of monosilicic acid-Si plus 30 mg L⁻¹ of disilicic acid-Si when shaken in solution alone (5 g per 125 mL). Straw in dialysis bags (0.5 g per 25 mL in 0.1 M NaCl) was shaken in soil suspension (5 g per 100 mL) for 60 days. Similar concentrations and releases were measured to those obtained above. About one fifth of the mass of straw was lost by decomposition in the first 15 days. A chloroform treatment prevented decomposition, but Si release was unaffected. Disintegration continued throughout the experiments, with phytoliths being exposed and dissolved. Compared to the rate of release from straw into solution without soil, the release of Si into soil suspensions was increased during the first 20 days by adsorption on the soil, but was then reduced probably through the effect of Fe and Al on the phytolith surfaces. The extent of this blocking effect varied between soils and was not simply related to soil pH.     

Gene dosage effect of the wheat Wx alleles and their interaction on amylose synthesis in the endosperm

To find out gene dose effect of each of the three homoeologous Wx genes and their interaction on the production of granule-bound starch synthase (GBSS I) and amylose biosynthesis in the endosperm, Chinese Spring and its near-isogenic waxy types were crossed reciprocally and, obtained a plant population with varying doses of each Wx gene. The amount of GBSSI was increased linearly with increasing gene dose of either of Wxloci. In each of the three Wx loci, the change in amylose content was linear up to 3 doses, with a more potent capacity ofWx-B1a at any dose. Higher level of amylose production was observed in the reciprocal F₁ grains than the expected effect of dose/s of each gene or additive effect of different allelic combination by artificially blend starches which have amylose produced by equivalent number ofWx alleles to that of relevant F₁ cross. When Wx-B1a and Wx-A1a were combined, increase in amylase content was not in proportion to increase in gene dosage. The enhanced amylase synthesis was shown by 2-gene and 3-geneinteraction, indicating that not only type of the three Wx genes and its dose but the interaction among them have significant roles in determining the amylose content. This revised version was published online in July 2006 with corrections to the Cover Date.     

Transformations of nitrogen fertilizers in soil

The effects of ¹⁵N-labelled urea, (NH₄)₂SO₄ and KNO₃ on immobilization, mineralization, nitrification and ammonium fixation were examined under aerobic conditions in an acid tropical soil (pH 4.0) and in a neutral temperate soil (pH 6.8). Urea, (NH₄)₂SO₄ and KNO₃ slightly increased net mineralization of soil organic nitrogen in both soils. There was also an apparent Added Nitrogen Interaction (ANI) i.e. added labelled NH₄-N stood proxy for unlabelled NH₄-N that would otherwise have been immobilized. So far as immobilization and nitrification were concerned, urea and (NH₄)₂SO₄ behaved very similarly in each soil. Immobilization of NO₃-N was negligible in both soils. Some of the added labelled NH₄-N was rapidly fixed, more by the temperate soil than by the tropical soil. This labelled fixed NH₄-N decreased during incubation, in contrast to labelled organic N, which did not decline.     

Nitrification and autotrophic nitrifying bacteria in acid tea soils

Pure cultures of ammonium-oxidizing, autotrophic, nitrifying bacteria were isolated from acid soils (pH range, 4.0–4.5) from tea estates in Sri Lanka (8 soils) and Bangladesh (4 soils). All the Bangladesh nitrifiers were Nitrosospira spp but the Sri Lanka isolates were identified as Nitrosolobus spp Nitrosospira spp and one species of Nitrosovibrio. Nitrite-oxidizing nitrifiers were detected in several of the soils but pure cultures were not isolated.Evidence was obtained that Nitrosospira caused nitrification in situ in an acid soil (pH 4.1). Indigenous nitrate was first eliminated from the soil by denitrification. The soil was then incubated aerobically and the nitrate formed was estimated as N₂O by gas chromatography after denitrification.     

Bulbing responses of two cultivars of red tropical onions to photoperiod,light integral and temperature under controlled growth conditions

Summary

The effects of photoperiod, light intensity and temperature on bulb formation and bulb structure of two tropical onion cultivars were investigated. From an initial experiment it was observed that the number of true scales and sheath scales differed significantly between the cultivars ‘Red Creole’ and ‘Agrifound Dark Red’. When these two cultivars were given 11, 12 and 13 h photoperiod treatments, it was found that both cultivars needed at least 12 h photoperiod for bulb formation. Modify the R/FR ratio from 1.22 to 1.16 in the final hour of the 11 h light period did not induce bulbing. The 13 h photoperiod increased the number of true scales and decreased the number of sheath scales compared with the 12 h photoperiod in both cultivars but total scale + leaf sheath numbers remained nearly constant. When onion plants were grown under 0%, 25%, 50% and 75% shading treatments, (12 h photoperiod), only plants receiving 0% and 25% shading bulbed. Low light intensity decreased the number of true scales and increased the number of sheath scales. Four temperature regimes were compared in a growth room experiment. Plants under the 29°348C treatment bulbed within two weeks and matured within six weeks. However, plants receiving the 25°308C treatment delayed bulb initiation more than those plants receiving 17°228C and 21°268C treatments. At the lowest temperature, bigger bulbs with thick necks were produced. This may be due to changes in bulb structure since at low temperature, the number of sheath scales was increased, however the number of true scales remained relatively constant in both cultivars. Dormant leaf initials decreased with decreasing temperature while the number of secondary meristems significantly increased. The results suggest that ‘Red Creole’ was more responsive to shorter photoperiods, bulbing earlier than ‘Agrifound Dark Red’. There was no significant difference in time to bulbing in response to temperature between the two cultivars if measured by bulbing ratio however there were differences in bulb structure which suggested that ‘Red Creole’ bulbed earlier. These effects may be due to the breeding histories of the two cultivars. It is suggested that studying bulb structure may provide a useful method of interpreting onion bulbing responses.     

Nitrification in acid tea soils and a neutral grassland soil: Effects of nitrification inhibitors and inorganic salts

Nitrification was much slower in five strongly acid (pH 4.0–4.3) soils from tea plantations in Sri Lanka than in a near-neutral grassland soil from the U.K., suggesting that the nitrifiers in these tea soils are close to the lower limit of their pH range. Nitrapyrin effectively inhibited nitrification in all the soils: dicyandiamide was less effective. Low concentrations of KC1 slowed nitrification in the acid tea soils but not in the near-neutral grassland soil. The concentrations of KC1 used (up to 20 mM) were sufficient to cause measurable decreases in soil pH in both acid and neutral soils. It is proposed that this salt-induced decrease in pH is detrimental to nitrifying organisms operating at the limit of their pH range but not to nitrifiers nearer their pH optimum.     

Molecular characterization and phylogenetic analysis of Setaria digitata of Sri Lanka based on CO1 and 12S rDNA genes

The aim of the present research is to determine the phylogenetic position of Setaria digitata of Sri Lanka in the evolutionary tree of filarial worms. DNA sequences of portions of the mitochondrial genes cytochrome c oxidase subunit 1 (CO1) and small subunit ribosomal RNA (12S rDNA) were analysed. Intra-specific variation was observed in CO1 but not in 12S rDNA. Phylogenetic trees inferred from these two genes resembled one another in recognizing monophyly of Setaria. S. digitata and Setaria labiatopapillosa appear to be sister species.     

Scanning interferometric apertureless microscopy: optical imaging at 10 angstrom resolution

Interferometric near-field optical microscopy achieving a resolution of 10 angstroms is demonstrated. The scattered electric field variation caused by a vibrating probe tip in close proximity to a sample surface is measured by encoding it as a modulation in the optical phase of one arm of an interferometer. Unlike in regular near-field optical microscopes, where the contrast results from a weak source (or aperture) dipole interacting with the polarizability of the sample, the present form of imaging relies on a fundamentally different contrast mechanism: sensing the dipole-dipole coupling of two externally driven dipoles (the tip and sample dipoles) as their spacing is modulated.     

Tissue tropism of avian reoviruses is genetically determined.

Two genome segments, M2 and S1, were preferentially selected in reassortants isolated in Vero cells. Analysis with monoclonal antibodies (MAbs) against RAM-1 strain showed that the 39-kDa protein encoded by the genome segment S1 contained epitopes involved in neutralisation of virus infectivity for both Vero and chicken kidney (CK) cells. The 39-kDa protein appeared to have two major epitopes that are attachment sites for cell receptors, one interacting only with CK cell receptors and the other with both CK and Vero cell receptors but principally Vero cell receptors. These results suggest that the strain RAM-1 may have developed an epitope for Vero cell receptors owing to mutation in the S1 genome segment, but still retained the epitope responsible for infection of CK cells.