Characterization and antimicrobial susceptibility of biofilm-producing Avian Pathogenic Escherichia coli from broiler chickens and their environment in India

Veterinary Research Communications - Avian pathogenic Escherichia coli (APEC) is responsible for colibacillosis in poultry. APEC remains a constant problem for the poultry industry, despite the use...     

Carbon sequestration potential of five tree species in a 25-year-old temperate tree-based intercropping system in southern Ontario,Canada

Carbon (C) sequestration potential was quantified for five tree species, commonly used in tree-based intercropping (TBI) and for conventional agricultural systems in southern Ontario, Canada. In the 25-year-old TBI system, hybrid poplar (Populus deltoides × Populus nigra clone DN-177), Norway spruce (Picae abies), red oak (Quercus rubra), black walnut (Juglans nigra), and white cedar (Thuja occidentalis) were intercropped with soybean (Glycine max). In the conventional agricultural system, soybean was grown as a sole crop. Above- and belowground tree C Content, soil organic C, soil respiration, litterfall and litter decomposition were quantified for each tree species in each system. Total C pools for hybrid poplar, white cedar, red oak, black walnut, Norway spruce and a soybean sole-cropping system were 113.4, 99.4, 99.2, 91.5, 91.3, and 71.1 t C ha^?1, respectively at a tree density of 111 trees ha^?1, including mean tree C content and soil organic C stocks. Net C flux for hybrid poplar, white cedar, red oak, black walnut, Norway spruce and soybean sole-crop were 2.1, 1.4, 0.8, 1.8, 1.6 and ?1.2 t C ha^?1 year^?1, respectively. Results presented suggest greater atmospheric CO₂ sequestration potential for all five tree species when compared to a conventional agricultural system.     

Estimating coarse root biomass with ground penetrating radar in a tree-based intercropping system

Conventional measurements of tree root biomass in tree-based intercropping (TBI) systems can be inadequate in capturing the heterogeneity of rooting patterns or can be highly destructive and non-repeatable. In this study, we estimated coarse root biomass using ground penetrating radar (GPR) of 25-year-old trees inclusive of five species (Populus deltoides × nigra clone DN-177, Juglans nigra L., Quercus rubra L., Picea abies L. Karst, and Thuja occidentalis L.) at a TBI site in Southern Ontario, Canada. Subsurface images generated by GPR were collected in grids (4.5 × 4.5 m) centred on tree stems. The predictive relationship developed between GPR signal response and root biomass was corrected for species effects prior to tree-scale estimates of belowground biomass. Accuracy of the tree-scale estimates was assessed by comparing coarse root biomass measured from complete excavations of the corresponding tree. The mean coarse root biomass estimated from GPR analysis was 54.1 ± 8.7 kg tree^?1 (mean ± S.E.; n = 12), within 1 % of the mean coarse root biomass measured from excavation. Overall there was a root mean square error of 14.4 kg between measured and estimated biomass with no detectable bias despite variable conditions within the in-field and multi-species study. Root system C storage by species, calculated with species-specific root carbon concentrations, is estimated at 5.4 ± 0.7–34.8 ± 6.9 kg C tree^?1 at this site. GPR is an effective tool for non-destructively predicting coarse root biomass in multi-species environments such as temperate TBI systems.     

Mechanisms of resistance to shoot fly, <Emphasis Type="Italic">Atherigona soccata</Emphasis> in sorghum

Summary Sorghum shoot fly, Atherigona soccata (Rondani) is an important pest of sorghum in Asia, Africa, and Mediterranean Europe, and host plant resistance is an important component for the management of this pest. The levels of resistance in the cultivated germplasm are low to moderate, and therefore, it is important to identify genotypes with different mechanisms of resistance to pyramid the resistance genes. We studied the antixenosis for oviposition, antibiosis, and tolerance components of resistance in a diverse array of shoot fly-resistant and -susceptible genotypes. The main plants and tillers of SFCR 151, ICSV 705, SFCR 125, and, IS 18551 experienced lower shoot fly deadhearts at 28 days after seedling emergence, produced more number of productive tillers. The insects fed on these genotypes also exhibited longer larval period (10.1–11.0 days compared to 9.3 days on Swarna), lower larval survival and adult emergence (54.7–67.8 and 46.7–52.2% compared to 73.3 and 60.6% on Swarna, respectively), and lower growth and adult emergence indices as compared to the susceptible check, Swarna. Physico-chemical traits such as leaf glossiness, trichome density, and plumule and leaf sheath pigmentation were found to be associated with resistance, and chlorophyll content, leaf surface wetness, seedling vigor, and waxy bloom with susceptibility to shoot fly and explained 88.5% of the total variation in deadhearts. Step-wise regression indicated that 90.4% of the total variation in deadhearts was due to leaf glossiness and trichome density. The direct and indirect effects, correlation coefficients, multiple and step-wise regression analysis suggested that deadhearts, plants with eggs, leaf glossiness, trichomes on the abaxial surface of the leaf, and leaf sheath pigmentation can be used as marker traits to select for resistance to shoot fly, A. soccata in sorghum.     

Relative susceptibility of different male-sterile cytoplasms in sorghum to shoot fly, <Emphasis Type="Italic">Atherigona soccata</Emphasis>

Summary The shoot fly, Atherigona soccata is an important pest of sorghum, and host plant resistance is one of the most effective components for managing this pest. Most of the hybrids grown in India based on milo cytoplasm (A₁ cytoplasm) are highly susceptible to shoot fly. Therefore, the present studies were undertaken to evaluate different male-sterile cytoplasms (CMS) for their relative susceptibility to sorghum shoot fly. Oviposition and deadheart formation were significantly lower on the maintainer lines as compared to the corresponding male-sterile lines. Among the cytoplasms tested, A₄M cytoplasm showed antixenosis for oviposition and suffered lower deadheart formation than the other cytoplasms tested. The A₄G₁ and A₄M cytoplasms suffered lower deadhearts in tillers than the other cytoplasms. Recovery following shoot fly damage in A₄M, A₃, and A₂ cytoplasms was better than in the other cytoplasms tested. The larval and pupal periods were longer and male and female pupal weights lower in A₄M and A₄VzM CMS backgrounds compared to the other CMS systems. Fecundity and antibiosis indices on CMS lines were lower than on the B-lines. The A₄M cytoplasm was found to be relatively resistant to sorghum shoot fly, and can be exploited for developing shoot fly-resistant hybrids for sustainable crop production in future.     

An Analysis of Seasonal Effects on Leaf Nitrate Reductase Activity and Nitrogen Accumulation in Maize (Zea mays L.)

The important enzyme in nitrogen (N) assimilation, nitrate reductase (NR), is an inducible enzyme influenced by many external (light, temperature, etc.) and internal (genotype) factors. The efficiency of the N assimilation system may vary with genotype and season. In the present study, the effects of season on NR activity in relation to N accumulation in maize plants were investigated. Six different cultivars of maize, namely Ganga-11, Deccan-103, Hi-starch (hybrids), Arun, Manjari and Vijay (composites), were sown during the monsoon (88-day crop duration) and in winter (150-day crop duration). In vivo NR activity in the last fully expanded leaf (LFEL), and the N contents of the whole plant and the LFEL were estimated at seven phenological growth stages. Three different states of N metabolism in maize, namely (i) low NR activity per unit leaf area per unit time coinciding with high accumulation of N, (ii) high NR activity coinciding with low N accumulation, and (iii) low NR activity coinciding with low N accumulation, were noted. These results clearly demonstrate that the relationships between N uptake and accumulation parameters change with the season and crop growth stage and are subject to a genotypic influence. Thus it is necessary to evaluate genotypes under similar environments to select a genotype with high N use efficiency. As these relationships are growth dependent, care must be taken to evaluate them at a particular phenological stage rather than on the basis of days after sowing.     

Sediment Retention by Alternative Filtration Media Configurations in Stormwater Treatment

Urban stormwater can be treated by infiltration at the source using systems like permeable paving. A critical component of such a system is the filtration media. Laboratory experiments were conducted using columns and boxes to evaluate the sediment retention efficiencies of different filtration media—crushed Greywacke, Greywacke mixed with 10% sand, and layered Greywacke and sand-Greywacke mix. Sediments of 0.001–6 mm were applied at concentrations of 460–4,200 mg/l along with water at flow rates of 100–900 ml/min. All columns showed between 96 and 91% sediment retention efficiency for single dry sediment applications, with lowered sediment retentions at higher flow rates. Decreasing the sediment loading, applying particles of <38 μm size, and suspending the particles in inflow as opposed to directly applying sediments to the column surface gave lower sediment retention efficiencies of 55 to 89%. Sediment retention primarily occurred in the top 20 mm of all columns and the 50th percentile value of retained sediments was 100–300 μm. The box tests showed little effect of flow and sediment loading on particle retention, with the tests showing an average retention of 93%. Similar to the column tests, the box tests showed lower sediment retention (84 to 88%) for <38 μm sediments and greater retention (approximately 95%) for larger sediments.     

Dry matter partitions and specific leaf weight of soybean change with tree competition in an intercropping system

In 2004 and 2005, the yield, leaf area, dry weight and dry weight partitions of soybeans were determined at the Agroforestry Research Site (ARS) (est. 1987, Ontario, Canada). Soybean was intercropped with poplar (Populus deltoides x nigra DN-177 L., 556 m³crown tree⁻¹), silver maple (Acer saccharinum L., 308 m³), black walnut (Juglans nigra L., 148 m³) and pecan (Carya illinoensis Wangenh., 114 m³), or grown alone (monoculture). Yield of soybean was not different in either year between the monoculture and the black walnut or pecan intercrops. In the poplar and silver maple treatments, yield was 66 and 85% (2004 and 2005) lower than in the monoculture. Despite the fact that different tree species were used, there was a significant negative linear regression between yield and tree crown volume (R ² = 0.76, P = 0.0049 and R ² = 0.93, P < 0.0001 in 2004 and 2005, respectively). With increasing tree crown volume, soybean tended to partition more dry matter to the photosynthetic and reproductive parts and less to structural tissue and petiole. This demonstrates the phenotypic flexibility of the crop component in agroforestry systems. Contrary to theoretical predictions, soybean leaves were thicker as shade increased (increase by 6.2 × 10⁻⁴–1.2 × 10⁻³ mg cm⁻², per unit of crown volume), pointing to competitive interactions specific to tree-based intercrops.