Genetic relationship, inbreeding and generation interval in registered Gir cattle in Brazil

SUMMARY: Two-hundred random pedigrees of cows and fifty of sires born in 1987 from the Gir herdbook of the Brazilian Association of Zebu Breeders were analized. The bull Chave de Ouro DGR no. 2851 was the most influential animal with a 7% direct relationship to the breed. Total average inbreeding was 3.62 and 3.25 for the female and male sample, respectively. The subdivision of total inbreeding into current and non-current components resulted in values of 1.62, 1.25, 2.00 and 2.00 for the female and male sample, respectively. Long-term inbreeding was the principal component of non-current inbreeding, with values of 1.52% and 1.26%, respectively. Inbreeding due to strain formation strain due formation was less important (0.48% and 0.74%, respectively). The average generation interval was 8.02 years. The breed appears not yet to be subdivided into strains but this process may be starting. The average generation interval for the pedigree population was very high. Culling of old bulls could decrease this interval. ZUSAMMENFASSUNG: Verwandtschaft, Inzucht und Generationsintervall bei Gir Herdbuchrindern in Brasilien 200 zuf?llige Stammb?ume von Kühen und 50 von 1987 geborenen Stieren wurden vom Gir Herdbuch des brasilianischen Zebu Zuchtverbandes genommen. Der Stier Chave de Ouro DGR Nr. 2851 war das einflu?reichste Tier mit einer 7%igen direkten Verwandtschaft zur Rasse. Der gesamte Inzuchtkoeffizient war 3.6 und 3.25% für die weibliche und m?nnliche Stichprobe. Die Unterteilung der gesamten Inzucht in laufende und nicht laufende Komponenten resultierte in Werten von 1.62, 1.25, 2.0, 2.0 für die weibliche und die m?nnliche Stichprobe. Langfristige Inzucht war die Hauptursache für Nicht-Rezente Inzucht mit Werten von 1.5 und 1.26. Inzucht aufgrund von Linienbildung war weniger wichtig (0.48% und 0.74%). Das durchschnittliche Generationsintervall war 8.02 Jahre. Die Rasse scheint noch nicht in Linien unterteilt zu sein, aber dieser Proze? k?nnte begonnen haben. Das durchschnittliche Generationsintervall ist mit 8.02 Jahren sehr hoch. Nichtverwendung alter Stiere k?nnte dieses Intervall verkürzen.     

In vitro ruminal fermentation parameters and methane production of Marandu palisadegrass (Urochloa brizantha) in a silvopastoral system associated with levels of protein supplementation

The addition of protein supplementation in a silvopastoral system can contribute to improved forage intake and digestibility. Our objective was to evaluate in vitro ruminal parameters, digestibility and gas production of Marandu palisadegrass [Urochloa brizantha (Hochst. ex A. Rich.) R. D. Webster] in a silvopastoral system and compare this to parameters obtained from diets with protein supplementation. Forage was sampled during the growing season (November to April) in 2016/17 and 2017/18. In vitro incubation treatments consisted of four levels of protein supplement (20% of crude protein; CP) in the diet (0.1, 0.2, 0.3 and 0.4 g/kg of body weight). The neutral detergent fibre, acid detergent fibre and indigestible neutral detergent fibre concentrations were highest in the first year. In the second year, CP concentration was 21% greater than in the first year. There was a linear increase for digestion rate, a quadratic effect for lag time and a linear decrease for average digestion time as supplementation levels were increased. The least lag time and digestion time occurred in the second year. There was no supplementation effect on ruminal pH, acetate and butyrate concentrations. Second-year in vitro dry matter digestibility (IVDMD) was greater than in the first year. Increases in supplementation levels linearly enhanced IVDMD and reduced methane (CH₄) production. The inclusion of a protein supplement contributed to reduced CH₄ and increased volatile fatty acids production; therefore, we recommended the supplement inclusion of >0.28 g/kg of BW for animals grazing in well-managed palisadegrass pastures.     

Use of genomic and phenotypic selection in lines for prediction of testcrosses in maize II: grain yield and plant traits

Plant breeders have been trying to predict the performance of hybrids based on their parental performance. One application of molecular markers is its use in selection. The objectives were to map quantitative trait loci (QTL) and verify its congruence in maize lines and in their testcrosses and verify the possibility to select testcrosses from the predicted means of the lines by using information from markers. Two-hundred and fifty six lines and the testcrosses of these lines with two testers were evaluated in six environments, considering grain yield, plant lodging, days to anthesis and silking, anthesis-silking interval, plant and ear height and ear placement. QTL were mapped in the lines and in testcrosses and the predicted means of the lines were computed based on QTL effects and in all markers of the genome. The congruence of QTL detected in the lines and testcrosses were small for all traits. The correlations between the predicted means of the lines and the phenotypic means of the testcrosses ranged from low for grain yield to moderate for cycle and stature traits. The highest coincidences of the lines and selected testcrosses were observed for cycle and stature traits and the lowest for grain yield. Even by using molecular markers information, it is only possible to predict the testcrosses performance from the lines information to less complex traits and with reduced dominance effect. For complex traits and with pronounced dominance effect, information of markers must be obtained directly in the testcrosses, so they can be used for selection.     

Changes in Physical Properties of Soils with Land Use Time in the Brazilian Savanna Environment

Soils from central Brazil have been intensively used over the last decades because of the rapid conversion of savannas ( Cerrado ) into corn/soybean fields. The objective of this work is to study modifications in the physical properties of soils in the Rio Verde watershed, as a function of the land use time for agriculture, determined from classification of Landsat satellite images between 1980 and 2010. Soil samples were collected at surface (0–20 cm) and subsurface (20–40 cm) horizons for the different classes of land use time (<10, 10–20, 20–30, and >30 years). The following physical properties were measured: bulk density (BD), air permeability (K_a), penetration resistance (PR), microporosity (MI), macroporosity (MA), and total porosity (TP). Results showed a strong expansion with time of agriculture that occupied 35·3% (1980), 37·4% (1990), 51·3% (2000), and 60·9% (2010) of the watershed area. When properties were compared with those from the reference areas (preserved soils under native vegetation), significant differences were observed for all the physical attributes of soils for a land use time higher than 20 years. Overall, BD and PR increased with land use time, and the opposite was verified for K_a, MA, and TP. Some physical properties presented values (e.g., 1·54 g cm⁻³ for BD and 0.06 cm³ cm⁻³ for MA) close to the critical ones reported to affect crop development, but they were not still impacting on local soybean yield. Copyright © 2013 John Wiley & Sons, Ltd.     

Phenotypic and genotypic characterization of Paenibacillus larvae isolates

Paenibacillus larvae is the causative agent of American Foulbrood (AFB), a severe disease of honeybees (Apis melifera). The aim of this work was to develop a strategy for the subtyping and the epidemiological analysis of P. larvae. Phenotypic characterisation, susceptibility to several antibiotics, electrophoresis of whole bacterial proteins, rep-PCR, ribotyping and DGGE were assessed using a collection of P. larvae isolates from different Uruguayan and Argentinean locations. Results indicated that there are two P. larvae genotypes circulating in Uruguay ERIC I-BOX A (worldwide distributed) and ERIC I-BOX C (exclusively detected in Argentina until this study). These results suggest that P. larvae isolates had moved between Argentina and Uruguay, probably through the Uruguay River. Patterns of whole bacterial proteins, DGGE and ribotyping did not improve the P. larvae intraspecific discrimination. Antibiotic susceptibility assays showed that 100% isolates were OTC-sensitive and 22% (belonging to ERIC I-BOX A group) were sulfisoxazole-resistant. This work may contribute to the elucidation of basic aspects related to the epidemiology of AFB in Uruguay and in the region.