Mapping QTLs using a novel source of salinity tolerance from Hasawi and their interaction with environments in rice

Background

Salinity is one of the most severe and widespread abiotic stresses that affect rice production. The identification of major-effect quantitative trait loci (QTLs) for traits related to salinity tolerance and understanding of QTL × environment interactions (QEIs) can help in more precise and faster development of salinity-tolerant rice varieties through marker-assisted breeding. Recombinant inbred lines (RILs) derived from IR29/Hasawi (a novel source of salinity) were screened for salinity tolerance in the IRRI phytotron in the Philippines (E1) and in two other diverse environments in Senegal (E2) and Tanzania (E3). QTLs were mapped for traits related to salinity tolerance at the seedling stage.

Results

The RILs were genotyped using 194 polymorphic SNPs (single nucleotide polymorphisms). After removing segregation distortion markers (SDM), a total of 145 and 135 SNPs were used to construct a genetic linkage map with a length of 1655 and 1662 cM, with an average marker density of 11.4 cM in E1 and 12.3 cM in E2 and E3, respectively. A total of 34 QTLs were identified on 10 chromosomes for five traits using ICIM-ADD and segregation distortion locus (SDL) mapping (IM-ADD) under salinity stress across environments. Eight major genomic regions on chromosome 1 between 170 and 175 cM (qSES1.3, qSES1.4, qSL1.2, qSL1.3, qRL1.1, qRL1.2, qFWsht1.2, qDWsht1.2), chromosome 4 at 32 cM (qSES4.1, qFWsht4.2, qDWsht4.2), chromosome 6 at 115 cM (qFWsht6.1, qDWsht6.1), chromosome 8 at 105 cM (qFWsht8.1, qDWsht8.1), and chromosome 12 at 78 cM (qFWsht12.1, qDWsht12.1) have co-localized QTLs for the multiple traits that might be governing seedling stage salinity tolerance through multiple traits in different phenotyping environments, thus suggesting these as hot spots for tolerance of salinity. Forty-nine and 30 significant pair-wise epistatic interactions were detected between QTL-linked and QTL-unlinked regions using single-environment and multi-environment analyses.

Conclusions

The identification of genomic regions for salinity tolerance in the RILs showed that Hasawi possesses alleles that are novel for salinity tolerance. The common regions for the multiple QTLs across environments as co-localized regions on chromosomes 1, 4, 6, 8, and 12 could be due to linkage or pleiotropic effect, which might be helpful for multiple QTL introgression for marker-assisted breeding programs to improve the salinity tolerance of adaptive and popular but otherwise salinity-sensitive rice varieties.

     

Evaluation of mechanical properties of jute/glass/carbon fibers reinforced hybrid composites

A study on the tensile and flexural properties of jute-glass-carbon fibers reinforced epoxy hybrid composites in inter-ply configuration is presented in this paper. Test specimens were manufactured by hand lay-up process and their tensile and flexural properties were obtained. The effects of the hybridization, different fibers content and plies stacking sequence on the mechanical properties of the tested hybrid composites were investigated. Two-parameter Weibull distribution function was used to statistically analyze the experimental results. The failure probability graphs for the tested composites were drawn. These graphs are important tools for helping the designers to understand and choose the suitable material for the required design and development. Results showed that the hybridization process can potentially improve the tensile and flexural properties of jute reinforced composite. The flexural strength decreases when partial laminas from a carbon/epoxy laminate are replaced by glass/epoxy or jute/epoxy laminas. Also, it is realized that incorporating high strength fibers to the outer layers of the composite leads to higher flexural resistance, whilst the order of the layers doesn’t affect the tensile properties.     

Narbon Vetch (Vicia narbonensis L.): A Potential Feed Legume Crop for Dry Areas in West Asia

Provision of feed supplies for the rapidly growing livestock population is essential in West Asia. Shortages can be alleviated by growing forage crops in the existing fallow lands.
Narbon vetch (Vicia narbonensis L.) is a leguminous species with high yield potential, drought tolerance and cold resistance. It could be used for grain and straw production as source for animal feed in dry areas. It is good source of protein with seeds contain 28 % protein yielding 364 kg per hectare protein, whilst straw contains 9 % protein and yields a similar amounts of digestible protein per hectare.
Nine promising lines of Narbon vetch developed at ICARDA were tested at two sites over four years under rainfed conditions. Since climatic conditions were considered to be of considerable importance, each site in each year was treated as a separate environment to give eight environments with annual rainfall varied from 195 to 504 mm.
Narbon vetch possessed high seedling vigour with rapid winter growth and negligible cold damage. Grain yield varied form 0.47 to 1.90 t/ha, with a harvest index varying from 30 to 40 %. The data indicated that below 300 mm rainfall the grain yield varied from 0.47 t/ha when rain fall was 195 mm to 1.4 t/ha when rainfall was 245 mm. Most of the lines had wide adaptation to dry areas in terms of both grain yield and stability. Climate, except early spring rains had little effect on biological and grain yields.     

Rotavirus infection in calves in Bangladesh

Faecal samples from 434 calves under 1 year of age (307 diarrhoeal and 127 normal) were collected from three dairy farms and one village in selected areas of Bangladesh. The samples were tested by an enzyme-linked immunosorbent assay (ELISA) to detect the presence of rotavirus antigen. Of 402 dairy calves tested, 28 (7.0%) were positive, of which 21 (7.2%) were from diarrhoeic calves and 7 (6.3%) from non-diarrhoeic calves. Rotavirus infection varied from farm to farm (2.7–9.2%) and there was no positive response from any of the 32 village calves. Rotavirus was most commonly found in calves of 1 week of age or less (up to 22.2% in one group) but was not found in any calves later than 6 months of age. More than 80% of rotavirus-positive samples from diarrhoeic calves exhibited a titre of 128 or more (geometric mean 345±4.5), whereas non-diarrhoeal calves had titres less than or equal to 128 (geometric mean=29±1.9), suggesting that rotavirus infection in calves in Bangladesh was mostly associated with diarrhoea.     

Biochemical Changes in Freshwater Prawn Macrobrachium rosenbergii During Larval Development

Abstract.— Quantitative changes in the protein, lipid and carbohydrate were studied in the early larval stages of developing freshwater prawn Macrobrachium rosenbergii reared under fed and starved conditions to understand the relative importance of these nutrients in energy metabolism of the growing larvae. Larvae obtained from several females were stocked into three 250-L tanks at a density of 30 larvae/L. The feeding regime consisted of newly hatched Artemia nauplii. Protein was always the major organic constituent followed by lipids and then carbohydrates of both fed and starved larvae. Protein levels of both fed and starved larvae increased during development, suggesting an important role in morphogenesis. The decline of lipid during the larval growth that was more rapid for starved larvae, suggests a probable utilization of lipid as the major metabolic source of energy. Carbohydrates formed less than 5 and 2.4% of the larval dry weight of fed and starved larvae, respectively, suggesting their limited role in larval metabolism.     

Prevalence of Leptospira serogroup-specific antibodies in cattle associated with reproductive problems in endemic states of India

Tropical Animal Health and Production - In this study, the seroprevalence and distribution of Leptospira in dairy cattle in endemic states of India were investigated in association with...     

Postharvest quality response of strawberries with aloe vera coating during refrigerated storage

Strawberries (Fragaria × ananassa Duch.) were coated either with chitosan (1, 1.5, and 2% solution, w/v) or aloe vera (AV) gel and the coatings were air dried. Coated strawberries were put in a polypropylene box and stored in refrigerator (6 ± 1°C and 50 ± 5% relative humidity. The success of coating in retaining the postharvest quality of the strawberries was evaluated by determining respiration rate, firmness, weight loss, external colour change, ascorbic acid content, total soluble solids, acidity, pH, microbial decay and sensory quality. The incidence of microbial rot started on day-6 in uncoated and 1% chitosan coated strawberries. Strawberries coated with 1.5 and 2% chitosan were affected by microbial decay on day-9 of storage. On the other hand, rot incidence was initiated in AV gel coated strawberries on day-15 of storage. Aloe vera gel or chitosan coating reduced respiration rate, weight loss, and microbial decay and preserved firmness, ascorbic acid content, and other quality parameters, thus delaying ripening and the progress of fruit decay due to senescence or microbial attack. Furthermore, AV gel delayed the changes in external colour and retained all other postharvest quality of strawberries compared to chitosan coated or uncoated ones throughout the storage.     

Redox halopriming: A Promising Strategy for Inducing Salt Tolerance in Bread Wheat

New strategies to enhance growth and productivity of food crops in saline soils represent important research priorities. This study has investigated the role of certain priming techniques to induce salt tolerance of bread wheat. Wheat grains were soaked in 0.2 mm sodium nitroprusside as nitric oxide donor (redox priming), diluted sea water (halopriming) and the combination of both (redox halopriming). Grains were also soaked in distilled water (hydropriming); in addition, untreated grains were taken as control. Our results indicated that priming treatments significantly improved all growth traits and increased leaf pigments concentration as compared to the control. Priming treatments markedly enhanced membrane stability index, proline, total soluble sugars and K⁺ concentration with simultaneous decrease in the concentration of Na⁺ and malondialdehyde (MDA). Furthermore, yield and yield‐related traits such as plant height, spike length, total number of tillers, 1000‐grain weight, straw and grain yield considerably affected by priming treatments. Moreover, the grain yield of both genotypes was positively affected by redox halopriming treatment. However, the extent of enhancement was more prominent in Gemmiza‐9 (salt sensitive) than that in Sakha‐93 (salt‐tolerant). Overall, this study clearly indicated that redox halopriming treatment is a promising and handy technique to induce salinity tolerance of wheat genotypes.     

Community water management to intensify agricultural productivity in the polders of the coastal zone of Bangladesh

Paddy and Water Environment - Most of the lands of the southern coastal zone of Bangladesh are protected from tidal flooding and storm surges by embankments constructed during the 1960s and 1970s,...