Genetics of soybean-Heterodera glycines system

Genetics of resistance to soybean cyst nematode (SCN), Heterodera glycines Ichinohe is very complex. Crosses involving PI 437654, which is resistant to all races of cyst nematodes with other sources of resistance (Peking, PI 88788, and PI 90763) indicated that resistance to race 3 was controlled by four genes, two of which were dominant resistance genes and the other two were recessive resistance genes. For race 5, a four gene model with two recessive and two dominant resistance genes in epistasis has been proposed. For race 14, the results suggested a three gene model with one dominant and two recessive alleles. Several other plant introductions have been isolated which have different genes conditioning resistance. Most of the currently grown soybean varieties derived resistance from Peking and/or PI 88788. Resistance to SCN in these soybean varieties has broken down because of the emergence of several new races and populations of SCN. The use of PI 437654 or Hartwig and other plant introductions with different genes for resistance will broaden genetic diversity and stabilize yield.     

Evapotranspiration relationship with pan evaporation and evapotranspiration ratio of corn under different nitrogen levels and moisture regimes

In a field experiment with four moisture regimes and eight nitrogen levels, the ratios between evapotranspiration and pan evaporation ($\text{Et}\text{Eo}$) were low in the initial stages of crop growth and attained maximum values at 70–80% (20 and 40% available soil moisture depletion (ASMD)), 65% (60% ASMD) and 55% (80% ASMD) of the crop growth stage. Amongst nitrogen levels, the evapotranspiration ratio (ETR) was highest (3573) under no nitrogen and lowest (1312) with 180 kg N/ha. The 20% ASMD regime utilised less water (ETR= 1499 to produce a kilogram of grain than did the other moisture regimes. The lowest evapotranspiration ratio (914) was recorded with 20% ASMD and 180 kg N/ha in combination. The highest ETR (3954) was found with 60% ASMD and no nitrogen. An additive effect of nitrogen and moisture was found, in indicating that they can be substituted one for the other, when one of them becomes a constraint.     

Genetic and physiological evidence for the production of N-acyl homoserine lactones by Pseudomonas syringae pv. syringae and other fluorescent plant pathogenic Pseudomonas species

N-acyl homoserine lactones (AHLs) function as cell density (quorum) sensing signals and regulate diverse metabolic processes in several gram negative bacteria. We report that strains of Pseudomonas syringae pvs. syringae (Pss), tabaci and tomato as well as P. corrugata and P. savastanoi produce difussible AHLs that activate the lux operons of Vibrio fischeri or the tra::lacZ fusion of Agrobacterium tumefaciens. In Pss strain B3A, AHL production occurs in cell density dependent manner. Nucleotide sequence and genetic complementation data revealed the presence of ahlI_Pss, a luxI homolog within the Ahl⁺ DNA of Pss strain B3A. The DNA expresses in AHL-deficient strains of P. fluorescens and E. carotovora subsp. carotovora (Ecc), and restores extracellular enzyme production and pathogenicity in the Ecc strain. The derivatives of Pss strains B3A and 301D carrying chromosomal ahlI::lacZ do not produce AHL, but like their wild type parents, produce extracellular protease and the phytotoxin syringomycin as well as elicit the hypersensitive reaction in tobacco leaves. While these strains also produce a basal level of -galactosidase activity, the expression of ahlI::lacZ is substantially stimulated in the presence of multiple copies of the DNA or by the addition of cell-free spent cultures containing AHL. The activation of -galactosidase production occurs with spent cultures of some, but not all Pseudomonas strains which produce AHL as indicated by the Lux and tra::lacZ assays. Pss strains deficient in the global regulatory genes, gacA or lemA, produce very low levels of AHL. Since inactivation of ahlI_Pss eliminates AHL production and since Ahl⁺ Pseudomonas strains carry the homolog of ahlI_Pss, we conclude that ahlI_Pss specifies a key step in AHL biosynthesis and it has been conserved in many plant pathogenic pseudomonads.     

Characterization and antimicrobial susceptibility of biofilm-producing Avian Pathogenic Escherichia coli from broiler chickens and their environment in India

Veterinary Research Communications - Avian pathogenic Escherichia coli (APEC) is responsible for colibacillosis in poultry. APEC remains a constant problem for the poultry industry, despite the use...     

In vitro studies on the binding, antioxidant, and cytotoxic actions of punicalagin

The protective bioactivity of punicalagin, a high molecular weight polyphenol isolated from pomegranate fruit pith and carpellary membrane, against oxidative damages to lipids, amino acids constituting the proteins, and guanosine as a model for DNA has been investigated. The ABTS*-, guanosine, and tryptophan radical generated pulse radiolytically were repaired by punicalagin, k = (0.9-15) x 10(7) dm3 mol-1 s-1. The results are rationalized on the basis of the scavenging activity of punicalagin against various one-electron oxidizing radicals, namely, .OH, N3., and NO2. . The formation of the transient species in these reactions and the rate constants of the scavenging reactions have been probed using a time-resolved kinetic spectrophotometric technique. The antioxidant action of punicalagin is expressed not only through its scavenging reactions but also by its ability to form metal chelates. Binding of punicalagin with bovine serum albumin and metal ions such as iron and copper revealed different binding affinities, whereas its binding with DNA was very weak and nonspecific. In vitro cytotoxic studies against three cell lines, namely, Vero (normal African green monkey kidney cell line), Hep-2 (human larynx epithelial cancer cell line), and A-549 (human small cell lung carcinoma cell line) showed that this polyphenol is toxic only at higher concentration.     

Monitoring biochemical changes in bacterial spore during thermal and pressure-assisted thermal processing using FT-IR spectroscopy

Pressure-assisted thermal processing (PATP) is being widely investigated for processing low acid foods. However, its microbial safety has not been well established and the mechanism of inactivation of pathogens and spores is not well understood. Fourier transform infrared (FT-IR) spectroscopy was used to study some of the biochemical changes in bacterial spores occurring during PATP and thermal processing (TP). Spore suspensions (approximately 10(9) CFU/mL of water) of Clostridium tyrobutyricum, Bacillus sphaericus, and three strains of Bacillus amyloliquefaciens were treated by PATP (121 degrees C and 700 MPa) for 0, 10, 20, and 30 s and TP (121 degrees C) for 0, 10, 20, and 30 s. Treated and untreated spore suspensions were analyzed using FT-IR in the mid-infrared region (4000-800 cm(-1)). Multivariate classification models based on soft independent modeling of class analogy (SIMCA) were developed using second derivative-transformed spectra. The spores could be differentiated up to the strain level due to differences in their biochemical composition, especially dipicolinic acid (DPA) and secondary structure of proteins. During PATP changes in alpha-helix and beta-sheets of secondary protein were evident in the spectral regions 1655 and 1626 cm(-1), respectively. Infrared absorption bands from DPA (1281, 1378, 1440, and 1568 cm(-1)) decreased significantly during the initial stages of PATP, indicating release of DPA. During TP changes were evident in the bands associated with secondary proteins. DPA bands showed little or no change during TP. A correlation was found between the spore's Ca-DPA content and its resistance to PATP. FT-IR spectroscopy could classify different strains of bacterial spores and determine some of the changes occurring during spore inactivation by PATP and TP. Furthermore, this technique shows great promise for rapid screening PATP-resistant bacterial spores.     

Temperate forest development during secondary succession: effects of soil,dominant species and management

With the increase in abandoned agricultural lands in Western Europe, knowledge on the successional pathways of newly developing forests becomes urgent. We evaluated the effect of time, soil type and dominant species type (shade tolerant or intolerant) on the development during succession of three stand attributes: above-ground biomass, stand height (HT) and stem density (SD). Additionally, we compared above-ground biomass (AGB) in natural and planted forests, using ten chronosequences (8 from the literature and 2 from this study). Both AGB and HT increased over time, whereas SD decreased. HT, SD and AGB differed among species types. For example, birch had greater HT than alder, willow and ash at a similar age and had higher SD than pine and oak at a similar age. However, birch showed lower AGB than pine. HT and AGB differed among soil types. They were higher in rich soil than in poor soils. Comparative analysis between chronosequences showed an effect of the regeneration method (natural regeneration vs plantation) on above-ground biomass. Planted sites had higher AGB than natural regeneration. Time, soil type, species and regeneration method influenced the mechanism of stand responses during secondary succession. These characteristics could be used to clarify the heterogeneity and potential productivity of such spontaneously growing temperate forest ecosystems.     

Breeding crops for reduced-tillage management in the intensive, rice–wheat systems of South Asia

The importance of reduced tillage in sustainable agriculture is well recognized. Reduced-tillage practices (which may or may not involve retention of crop residues) and their effects differ from those of conventional tillage in several ways: soil physical properties; shifts in host–weed competition; soil moisture availability (especially when sowing deeply or under stubble); and the emergence of pathogen populations that survive on crop residues. There may be a need for genotypes suited to special forms of mechanization (e.g. direct seeding into residues) and to agronomic conditions such as allelopathy, as well as specific issues relating to problem soils. This article examines issues and breeding targets for researchers who seek to improve crops for reduced-tillage systems. Most of the examples used pertain to wheat, but we also refer to other crops. Our primary claim is that new breeding initiatives are needed to introgress favourable traits into wheat and other crops in areas where reduced or zero-tillage is being adopted. Key traits include faster emergence, faster decomposition, and the ability to germinate when deep seeded (so that crops compete with weeds and use available moisture more efficiently). Enhancement of resistance to new pathogens and insect pests surviving on crop residues must also be given attention. In addition to focusing on new traits, breeders need to assess germplasm and breeding populations under reduced tillage. Farmer participatory approaches can also enhance the effectiveness of cultivar development and selection in environments where farmers’ links with technology providers are weak. Finally, modern breeding tools may also play a substantial role in future efforts to develop adapted crop genotypes for reduced tillage.