Challenges in developing and implementing a decision support systems (ETÇAP) in forest management planning: a case study in Honaz and Ibradı, Turkey

Decision support systems (DSSs) are indispensable tools in preparing a forest management plan for a better combination of multiple forest values. This study attempted to develop and explain a stand-based forest management DSS (Ecosystem-based multiple-use forest planning [ETÇAP]) comprising a traditional simulation, linear programming (LP), metaheuristics and geographic information system. The model consists of five submodels; traditional management approach to handle inventory data, an empirical growth and yield model, a simulation to conceptualize management actions, a LP technique to optimize resource allocation and a simulated annealing approach to directly create a spatially feasible harvest schedule. The ETÇAP model has been implemented in a comparative two case study areas; Denizli–Honaz and Akseki–Ibrad?. Both simulation and optimization models outperformed to the traditional management plan. The periodical change of growing stock, allowable cuts, carbon sequestration and water production are used as performance indicators. The results showed that more amount of wood could be harvested over time compared to traditional level of harvesting. It could be concluded that various management strategies allowed managers to stimulate more decision options for better outputs through intertemporal trade-offs of management interventions as the model provided tools to quantify forest dynamics over time and space. Challenges exist to establish the functional relationships between forest structure and values for better quantification and integration into the management plans.     

Histologic characteristics and local cellular immunity of the gland of the third eyelid after topical ophthalmic administration of 2% cyclosporine for treatment of dogs with keratoconjunctivitis sicca

OBJECTIVE: To evaluate the efficacy of topical administration of a 2% solution of cyclosporine (CsA) for treatment of dogs with keratoconjunctivitis sicca (KCS) and to correlate results with histopathologic characteristics and local cellular immunity of the gland of the third eyelid. ANIMALS: 24 dogs with bilateral KCS. PROCEDURE: Lacrimal secretion was measured, using Schirmer tear test (STT) strips. Leukocyte and T-lymphocyte subsets were determined in blood samples. Histopathologic changes as well as CD4+, CD8+, and alpha-naphthyl-acetate esterase-positive (ANAE+) lymphocytes were evaluated. RESULTS: Clinical signs resolved at the end of 1 month in conjunction with significantly increased STT values, compared with baseline values. Fifteen and 30 days after discontinuation of CsA treatment, a decrease was observed in STT values in both eyes; however, only values for the right eye were significantly different. There was a significant decrease in the number of lymphocytes and ANAE+ lymphocytes 15 and 30 days after discontinuation of CsA treatment, compared with baseline values. Differences were not observed in number of CD4+ lymphocytes among treatment groups. However, there was a significant decrease in number of CD8+ lymphocytes with reversal of the CD4+:CD8+ in both eyes after CsA treatment for 30 days, compared with the control group. Increased secretory activity and decreased lymphocyte infiltration were characteristic histopathologic findings. CONCLUSIONS AND CLINICAL RELEVANCE: Topical administration of a 2% solution of CsA was effective for the treatment of dogs with KCS. Strict follow-up monitoring is required after the cessation of treatment because of the possibility of recurrence of KCS.     

Ongoing Activity of Toscana Virus Genotype A and West Nile Virus Lineage 1 Strains in Turkey: A Clinical and Field Survey

Toscana virus (TOSV), West Nile virus (WNV) and tickborne encephalitis virus (TBEV) are among major viral pathogens causing febrile disease and meningitis/encephalitis. The impact of these viruses was investigated at a referral centre in Ankara Province, Central Anatolia in 2012, where previous reports suggested virus circulation but with scarce information on clinical cases and vector activity. Serum and/or cerebrospinal fluid samples from 94 individuals were evaluated, in addition to field‐collected arthropod specimens that included 767 sandflies and 239 mosquitoes. Viral nucleic acids in clinical samples and arthropods were sought via specific and generic nested/real‐time PCRs, and antibody responses in clinical samples were investigated via commercial indirect immunofluorescence tests (IIFTs) and virus neutralization. A WNV antigen assay was also employed for mosquitoes. WNV neuroinvasive disease has been identified in a 63‐year‐old male via RNA detection, and the WNV strain was characterized as lineage 1. TOSV infections were diagnosed in six individuals (6.3%) via RNA or IgM detection. Partial sequences in a 23‐year‐old female, presented with fever and transient pancytopenia, were characterized as TOSV genotype A. Febrile disease with arthralgia and/or peripheral cranial nerve involvement was noted in cases with TOSV infections. Previous WNV and TOSV exposures have been observed in 5.3% and 2.1% of the subjects, respectively. No confirmed TBEV exposure could be identified. Morphological identification of the field‐collected mosquitoes revealed Culex pipiens sensu lato (74.4%), Anopheles maculipennis (20.9%), An. claviger (2.1%) and others. Sandfly species were determined as Phlebotomus papatasi (36.2%), P. halepensis (27.3%), P. major s. l. (19.3%), P. sergenti (8.9%), P. perfiliewi (4.4%), P. simici (2.6%) and others. Viral infections in arthropods could not be demonstrated. TOSV genotype A and WNV lineage 1 activity have been demonstrated as well as serologically proven exposure in patients. Presence of sandfly and mosquito species capable of virus transmission has also been revealed.     

Biosorption of Ce(III) onto modified Pinus brutia leaf powder using central composite design

The biosorption of Ce(III) from aqueous solution by citric acid-modified Pinus brutia leaf powder was studied in a batch system as a function of initial pH, temperature, initial concentration of adsorbate, and contact time. Central composite design method was used in the experiments. Thermodynamic parameters such as standard enthalpy (ΔH ⁰), entropy (ΔS ⁰), and free energy (ΔG ⁰) were calculated, and the results indicated that biosorption was exothermic. The biosorption of Ce(III) on modified Pinus brutia leaf powder was investigated by Freundlich, Langmuir, and Dubinin-Radushkevich (D-R) isotherms. The results show that Ce(III) adsorption can be explained by Langmuir isotherm model, and monolayer capacity was found as 62.1?mg/g. The results suggested that the modification process enhances the biosorption capacity of the adsorbent, and modified Pinus brutia leaf powder may find promising applications for the recovery of Ce(III) from aqueous effluents.     

Investigation of developmental toxicity and teratogenicity of macrolide antibiotics in cultured rat embryos

Macrolides are considered to be one of the safest anti-infective groups in clinical use, with severe adverse reactions being rare. However, there are limited data about their embryotoxicity and teratogenicity. We aimed to investigate and compare the effects of these agents on embryonic growth and development. Rat embryos were cultured in vitro for 48 h in rat serum. Whole rat serum was used as a culture medium for the control group while different concentrations of spiramycin and azithromycin (1.25-6.25 microg/ml), and clarithromycin (2.5-30 microg/ml) were added to rat serum for the experimental groups. Dose-dependent effects of macrolides on embryonic developmental parameters were compared using morphological methods. Embryos were evaluated for the presence of any malformations. After morphological examination of the embryos, total DNA was extracted from the cells using standard procedures to determine fragmentation of nuclear DNA of embryonic cells. When compared with the control embryos, the macrolides significantly decreased all growth and developmental parameters dose dependently. While clarithromycin was found to cause more developmental toxicity than spiramycin and azithromycin, azitromycin was determined to have more teratogenicity potential. Compared with controls, there was no difference regarding the fragmentation of nuclear DNA of all the agents used. According to these results, when the toxic and teratogenic potential of the used agents compared, because of the lower toxic and teratogenic effects observed with spiramycin, this agent may be preferred for parturients.     

The effect of salt stress on Arabidopsis thaliana and Phelipanche ramosa interaction

Salinity and Orobanche or Phelipanche spp. infection are important crop stress factors in agricultural areas. In this study, we investigated the effect of salt stress on Phelipanche ramosa seed germination and its attachment onto Arabidopsis thaliana roots. We also evaluated the effect of both stresses on the expression of genes regulated by abiotic and biotic stresses. According to our results, high concentration of NaCl delayed P. ramosa seed germination in the presence of a strigolactone analogue (GR24). A similar pattern was observed in the presence of A. thaliana plants. Furthermore, we found that salt‐treated A. thaliana seedlings were more sensitive to P. ramosa attachment compared with the untreated plants, indicating that there was a positive correlation between salt sensitivity and the ability of P. ramosa to infect A. thaliana plants. At the molecular level, a synergystic effect of both salt and P. ramosa stresses was observed on the cold‐regulated (COR) gene expression profile of treated A. thaliana seedlings. Our data clarify the interaction between parasitic plants and their hosts under abiotic stress conditions.     

Quantifying aggregate stability of a clay soil under annual forage crops

This study explored the influence of 10 annual forage legumes belonging to the Lathyrus and Vicia genera on wet aggregate stability (WAS) and dispersion ratio (DR) indices of a clay soil. Five Lathyrus and five Vicia species were sown in autumn. Seed‐to‐seed and row‐to‐row distance was maintained at 5 cm and 20 cm, respectively. The experiment was planned in a randomized block design with three replications. After 90 d following seed harvest, soil cores were collected from two depths (0–15, 15–30 cm) in each plot and WAS and DR were determined. Annual forage legumes increased WAS of the soil but decreased the DR index. The WAS and DR values were affected at level of p < 0.001 by genus, species, and soil depth. Values of WAS and DR of the control plots without plant on the average were found to be 44.5% and 9.3% for 0–15 cm, and 41.2% and 10.1% for 15–30 cm, respectively. For 0–15 cm depth, the highest WAS (77.7%) and the lowest DR (6.4%) values were found in L. sphaericus L. (wild) plots. For 15–30 cm depth, the highest WAS value (62.6%) was obtained in L. annuus L. (wild) plots and the lowest DR value (6.7%) was in L. sativus L. (Gurbuz‐2001) plots.     

Phylogenetic relationships among Triticum L. and Aegilops L. species as genome progenitors of bread wheat based on sequence diversity in trnT-F region of chloroplast DNA

Cultivated wheat, (Triticum aestivum L.), is one of the most important food crops in the world. The Aegilops L. genus is frequently utilized by plant breeders for improving the current wheat cultivars due to their close relationships. Therefore, understanding the phylogenetic relationships among the species of these genera is not only valuable for plant taxonomy, but also for plant breeding efforts. The presented phylogenetic analysis was based on the sequences of trnT-F chloroplast DNA containing three non-coding sub-regions. Twelve genotypes belonging to four species of Triticum L. genus and twenty-four genotypes belonging to eight species of Aegilops genus were used in the current study. The results postulated a close genetic relationship between diploid Aegilops species containing the BB genome and polyploid Triticum species. With the exception of Aegilops cylindrica Host (CCDD), all other Aegilops species having the CC genome were alienated from Aegilops speltoides Tausch (BB) and clustered together. These two clusters joined by a third cluster including the AA genome containing diploid Triticum species.     

Nitrogen and phosphorous fertilizer improve pastures naturally growing under hazelnut trees

Abstract

This three-year study (2003–2005) aimed to improve the yield and quality of pastures growing naturally that are colonized by naturally occurring vegetation without agricultural input under hazelnut (Corylus sp.) orchards in the middle and eastern Black Sea regions of Turkey. There were eight treatments: 1) control; 2) fertilizer only (triple superphosphate 44% and calcium ammonium nitrate 26%) (80kg ha^?1 P and 60 kg ha^?1 N in Samsun; 100 kg ha^?1 P and 80 kg ha^?1 N in Ordu; 100 kg ha^?1 P and 40 kg ha^?1 N in Giresun); 3) lime only (calcium carbonate 94%) (3.0 t ha^?1 lime in Samsun; 4.5 t ha^?1 lime in Ordu and Giresun); 4) early cut only; 5) soil aeration only; 6) fertilizer+lime; 7) fertilizer+lime+early cut; 8) fertilizer+lime+soil aeration, laid out in a randomized complete block design with four replicates at each location. The highest dry matter (DM) yield of kg ha^?1 and crude protein content (%) was obtained from the treatments that included fertilizer. There was no difference in DM production between any of the combination treatments that involved fertilizer and the fertilizer alone treatment. Only lime and aeration applications also increased yield compared to control, but not as much as did any treatment including fertilizer. Crude protein content of the pasture ranged from 13.3 to 18.1% across locations. Nitrogen and phosphorus fertilizer are recommended to improve DM yields and herbage quality for pastures under hazelnut orchards.     

A study on the productivity and cost of cable logging in Turkey

Tower yarders have recently been introduced to forestry in Turkey. Clarification of the productivity and cost of logging using the tower yarder is often requested because the cost for machinery is a significant factor in all calculations concerning mechanized operations. Machines are often extremely expensive compared with the low cost of labor in developing regions. In this study, a new logging system using a tower yarder was compared with a conventional system using a stationary yarder in terms of productivity and cost. The research was conducted in the northeast of Turkey, in 1989 and 1992. The productivity of the tower yarder and the stationary yarder was found to be 5.655 m³/h and 5.002 m³/h, respectively. Harvesting cost was analyzed based on observed productivity. The harvesting costs of the tower yarder and the stationary yarder were found to be 47,410 TL/m³ and 17,553 TL/m³, respectively. With the tower yarder, the machine cost reached 93.1 % of the harvesting cost while the machine cost using the stationary yarder reached 71.1%. A part of this paper was orally presented at the 3rd Annual Meeting of the Japan Forest Engineering Society (1996).