The extent of genetic diversity among Vanilla species: Comparative results for RAPD and ISSR

Vanilla is a large genus of about 110 species in the orchid family (Orchidaceae), including the species Vanilla planifolia from which commercial vanilla flavoring is derived. Since most species of vanilla are considered rare and endangered there is an urgent need to conserve them through genetic analysis and propagation/conservation studies on this crop.The present study investigated the genetic diversity among nine leafy- and leaf-less Vanilla species employing 30 decamer RAPD primers and 10 ISSR primers. The species under study were diverse and displayed a range of variability (0–66% and 0–81% for RAPD and ISSR, respectively). A total of 154 RAPD polymorphic markers (83.24%, h = 0.378) and 93 ISSR polymorphic markers (86.11%, h = 0.363) were used to generate a genetic similarity matrix followed by the cluster analysis. Specific groupings were revealed by each cluster analysis with slight variation between two different markers. Among the nine species studied, V. planifolia, Vanilla aphylla and Vanilla tahitensis revealed very low level of variation within their collections, thus indicating a narrow genetic base. The large genetic distance of Vanilla andamanica from other species suggests its different origin. A close genetic affinity was observed between the pairs V. planifolia, V. tahitensis and Vanilla albida, V. aphylla. These are the first comparative results for RAPD and ISSR reporting inter-relationship among nine cultivated, wild and hybrid Vanilla species.     

Bronchoalveolar lavage in horses: effect of exercise and repeated sampling on cytology

SUMMARY Bronchoalveolar lavage (BAL) was performed at weekly intervals in 10 Thoroughbred horses in race training (group 1) and in 4 rested horses (group 2) for 10 weeks. Lavages were continued on a weekly basis in 4 group 1 horses for an additional 9 weeks (group 3). Cytological analysis of samples included leukocyte counts, erythrocyte counts, differential leukocyte counts, and haemosiderophage score. The mean leukocyte concentration was significantly lower in group 1(92.1 ± 4.6 cells/μL) when compared with group 2 (133.5 ± 8.2 cells/μL), P = 0.037. The differential leukocyte data were not significantly different between groups. There was a large amount of variability in the percent-age of macrophages and lymphocytes in the differential counts over time with no obvious trends. The proportion of neutrophils demonstrated a tendency to decrease over time for both groups 1 and 2. Erythrocyte counts and haemosiderin scores were significantly higher in the exercising group than the rested horses. Neither exercise nor the technique itself evoked an inflammatory response in the BAL fluid.     

Inflammation and increased numbers of bacteria in the lower respiratory tract of horses within 6 to 12 hours of confinement with the head elevated

SUMMARY: Confinement of horses with their heads elevated for periods up to 24 hours was used to evaluate the extent and the effects of bacterial contamination of the equine lower respiratory tract. Significant (P < 0.05) increases in bacterial numbers (up to 10⁹ colony forming units/mL in transtracheal aspirate derived samples) occurred within 6 or 12 hours in most horses. Pasteurella/Actinobacillus spp and Streptococcus spp were most commonly isolated. Lowering of the head for 30 minutes every 6 hours to facilitate postural drainage did not prevent multiplication of organisms to levels equivalent to those achieved by horses where the head was elevated for 24 hours. When horses were released from confinement and heads were no longer maintained in an elevated position, clearance of accumulated secretions and bacteria occurred within 8 to 12 hours. Thus, confinement with the head elevated resulted in significant bacterial contamination and multiplication within the lower respiratory tract during a period often encountered in routine management procedures, such as transportation. The clearance of accumulated secretions occurred over a prolonged period after release from such confinement.     

Survey of equine castration techniques,preferences and outcomes among Australian veterinarians

Objectives

(1) To collect the perceptions of veterinarians performing equine castrations in Australia on techniques, preferences and outcomes, (2) to investigate veterinarian use and experience with the Henderson castrating instrument and (3) to investigate potential associations between demographics, castration methods and techniques, and complications.

Design

Online survey of members of the Australian Veterinary Association’s Special Interest Group, Equine Veterinarians Australia (EVA).

Methods

A link to the survey was included in the EVA e‐newsletter and practices on the EVA website were contacted by telephone and follow‐up email. Fisher’s exact test was used to determine associations between ligation and complications. A generalised linear model with a negative binomial family was used to determine associations between count response variables and categorical independent variables.

Results

Responses were obtained from 138 veterinarians (response rate, 13.1%) who performed 5330 castrations over 12 months. Castrations were most commonly performed in the field, on anaesthetised horses, using emasculators, via an open approach and without ligation of the spermatic cord. Estimated complications after use of emasculators were swelling (25%), haemorrhage (5%) and infection (5%). The Henderson instrument was used by approximately 10% of respondents and its use for castration was associated with fewer reports of postoperative swelling compared with emasculators (P = 0.002). Rates of evisceration with the Henderson and emasculator methods were comparable (0.43% and 0.9%, respectively).

Conclusion

Castration preferences varied widely among survey participants. Reported complication types and rates were comparable to those reported previously in other countries. Perceptions that the Henderson instrument was associated with less swelling should be investigated further via a prospective controlled investigation.     

Alteration in important quality traits and antioxidant activities in Brassica oleracea with Ogura cybrid cytoplasm

In vegetable brassicas, cytoplasmic male sterility (CMS) system is the most preferred mechanism for hybrid seed production and Ogura cybrid cytoplasm is the only source used widely. Effects of the alien cybrid cytoplasm on important quality traits need to be understood for their effective use in breeding programme. In analysing 38 Ogura cybrid cytoplasm‐based cauliflower CMS lines, it was revealed that introgression of Ogura cytoplasm resulted in significant alteration in important quality traits. Cupric reducing antioxidant activity and ferric reducing ability of plasma values were increased up to 5–10 times in different genotypes. Among 38 analysed CMS lines, concentration of plant pigments such as anthocyanin, total chlorophylls and ascorbic acid was reduced in 21, 17 and 32 genotypes, respectively. However, the concentration of total carotenoids and β‐carotene was elevated in most of the CMS lines and total carotenoid was increased up to 20 times in the CMS line, Ogu13‐85‐2A. The results indicate the role of nuclear–cytoplasmic interaction and mitochondrial genome in determining concentration of different quality traits.     

Soil organic carbon stock variability in the Northern Gangetic Plains of India: interaction between agro‐ecological characteristics and cropping systems

Soil organic carbon (SOC) content and its spatial distribution in the Northern Gangetic Plain (NGP) Zone of India were determined to establish the cause–effect relationship between agro‐ecological characteristics, prevailing crop management practices and SOC stock. Area Spread Index (ASI) approach was used to collect soil samples from the NGP areas supporting predominant cropping systems. Exponential ordinary kriging was found most suitable geo‐statistical model for developing SOC surface maps of the NGP. Predicted surface maps indicated that 43.7% area of NGP had 0.5–0.6% SOC, while the rest of the area was equally distributed with high (0.61–0.75%) and low (< 0.5%) SOC content levels. Averaged across cropping systems, maximum SOC content was recorded in Bhabar and Tarai Zone (BTZ), followed by Central Plain Zone (CPZ), Mid‐Western Plain Zone (MWPZ), Western Plain Zone (WPZ) and South‐Western Plain Zone (SWPZ) of the NGP. The SOC stock was above the optimum threshold (> 12.5 Mg/ha) in 97.8, 57.6 and 46.4% areas of BTZ, CPZ and MWPZ, respectively. Only 9.8 and 0.4% area of WPZ and SWPZ, respectively, had SOC stock above the threshold value. The variation in SOC stock was attributed largely to carbon addition through recycling of organic sources, cropping systems, tillage intensity, crop or residue cover and land‐use efficiency, nutrient‐use pattern, soil texture and prevailing ecosystem. Adoption of conservation agriculture, balanced use of nutrients, inclusion of legumes in cropping systems and agro‐forestry were suggested for enhancing SOC stock in the region.     

Cultivar Specific Response of CO2 Fertilization on Two Tropical Mung Bean (Vigna radiata L.) Cultivars: ROS Generation,Antioxidant Status,Physiology, Growth,Yield and Seed Quality

Increasing atmospheric carbon dioxide concentration (CO₂) is an important component of global climate change that will have a significant impact on the productivity of crop plants. In recent years, growth and yield of agricultural crop plants have been shown to increase with elevated CO₂ (EC) and have enticed considerable interest due to variation in the response of crop plants. In this study, comparative response of two mung bean cultivars (HUM‐2 and HUM‐6) was evaluated against EC at different growth stages under near‐natural conditions for two consecutive years. The plants were grown in ambient as well as EC (700 ppm) in specially designed open‐top chambers. Under elevated CO₂, marked down‐regulation of reactive oxygen species (ROS) levels, membrane disruption and activities of superoxide dismutase and catalase were noticed in both the cultivars, but the extent of reduction was more in HUM‐6. As compared to ambient CO₂, EC increased total chlorophyll, photosynthetic rate, growth and yield parameters. Cultivar‐specific response was noticed as HUM‐6 showed higher increase in yield attributes than HUM‐2. Under CO₂ treatment, soluble protein and reducing sugars decreased while total soluble sugars and starch showed an opposite trend. Principal component analysis showed that both the cultivars responded more or less similarly to EC in their respective groupings of physiological and growth parameters, but the magnitude of ROS and antioxidative enzymes was variable. The experimental findings depict that both the cultivars of mung bean showed contrasting response against EC and paved the way for selecting the suitable cultivar having higher productivity in a future high‐CO₂ environment.     

Root growth, water potential, and yield of irrigated rice

Root length density (Lv), leaf water potential (Ψ leaf) and yield of rice were studied in 1983 and 1984 on a Phool bagh clay loam (Typic Haplaquoll) and on a Beni silty clay loam (Aquic Hapludoll) in the Tarai region of Uttar Pradesh under naturally fluctuating shallow (0.07–0.92 m) and medium-depth (0.13–1.26 m) water table conditions with six water regimes ranging from continuous submergence under 0.05 m ± 0.02 m (Ic) to completely rainfed (Io). In irrigation treatments, Ic1, Ic3, Ic5, and Ic7, 0.07 m irrigation was applied on days 1, 3, 5, and 7 respectively, after the disappearance of ponded water. Maximum rooting depth (0.55 m in the shallow and 0.65 m in the medium-depth water table) was attained at the dough stage (125 days after transplanting) and was more strongly influenced by fluctuations in water table depth than by the water regime. For wet regimes (Ic1–Ic5), roots were concentrated at and above the water table interface and had greater horizontal development, whereas in dry regimes, (Ic7 and Io) they were concentrated in lower horizons and had a more vertical distribution. Like Lv, Ψ leaf was not significantly affected by water regime up to 90–95 days after rice transplanting but was significantly affected thereafter, except for Lv beneath 0.2 m–0.25 m. Grain yields with irrigation treatments Ic1 and Ic3 under shallow and Ic1 under medium-depth water table conditions were not significantly different from those under continuous submergence, but there was a (nonsignificant) trend to lower yield with less water. However, differences among the wet regimes (Ic, Ic1, and Ic3) were small (141–490 kg ha^–1) under shallow and 413–727 kg ha^–1 under medium-depth water table conditions. The results demonstrate that optimum yield (5500–6000 kg ha^–1) could be obtained under Tarai conditions by adopting an intermittent irrigation schedule of 3–5 days after the disappearance of ponded water under shallow, and of 1–3 days under medium-depth water table conditions, in place of continuous submergence. Received: 26 February 1996     

FLOODING STRESS: The Effects of Planting Pattern and Water Regime on Root Morphology,Physiology and Grain Yield of Rice

Field experiments were conducted over two growing seasons to investigate the effects of variations in water regime and planting pattern on the growth of rice plant roots and shoots and on yield. Four water regimes were evaluated with split plot design: intermittent flooding during the vegetative stage only (IF‐V); intermittent flooding extending into the reproductive stage (IF‐R); not flooded (NF); and continuously flooded (CF), interacting with three different planting patterns: single seedling per hill with wider 30 × 30 cm spacing (P1); single seedling per hill with closer 20 × 20 cm spacing (P2); and three to four seedlings per hill with 20 × 20 cm spacing (P3). The treatment combination CF/P3 corresponds most closely with current conventional practice. The other combinations were evaluated to contribute to a better understanding of the effects of the two parameters studied, respectively and together. IF‐V/P1 was considered as an approximation of System of Rice Intensification (SRI) practice. This study found that the combination of singly transplanted seedlings, both P1 and P2, with the IF‐V water regime improved root length density, root physiological activity, and chlorophyll content of the upper and lower leaves, leading to higher grain yield compared with the other treatment combinations. With continuous flooding (CF), P2 gave 23 % more yield compared with the P3 planting pattern. Combining IF‐V and P2 produced 32 % more grain yield compared with the CF/P3 treatment. These results showed a synergistic effect on grain yield from reduced intra‐hill competition and IF‐V water management. In these trials, there was no significant yield difference between the IF‐V/P1 and CF/P3 treatments. Wider spacing improved the performance of individual hills when grown under IF‐V water regimes, but tiller number per unit area remained a dominant determinant of yield. The yield reduction observed for CF/P1 compared with CF/P3 indicated that in more hypoxic CF soils, denser plant populations can produce more than sparser ones, whereas the latter benefit from more aerobic soil conditions. Intermittent irrigation during the vegetative growth stage and transplanting single seedlings/hill are major elements of SRI methodology. These findings contribute to an understanding of why SRI methods can produce the higher yields reported. A consideration of the effects of interaction between planting pattern and water regime shows the need to establish empirically the optimum values for these treatments according to varietal, soil and climatic characteristics for the greatest yield response.