Evaluation of the Abbott LCx Mycobacterium Tuberculosis Assay for Direct Detection of Mycobacterium Bovis in Bovine Tissue Samples

The commercial LCx amplification assay, usually employed to detect the Myocobacterium tuberculosis complex in respiratory specimens, was evaluated by comparing the results it gave with those obtained using Löwenstein-Jensen solid medium and pathological findings on 55 lymph nodes from cattle with positive and 10 lymph nodes from cattle with negative skin tests for tuberculosis. Fifty-three cultures (51 and 2, respectively) were positive for M. bovis, while the results for the LCx assay and the histological method were positive in 48 (45, 3) and 24 (20, 4) samples, respectively. None of the samples from cattle from certified tuberculosis-free herds were positive by any of the procedures. The results obtained with the LCx assay, compared with the culture procedure, regarded as the gold standard among the diagnostic techniques, gave a specificity of 91.6% and sensitivity of 90.5%. Although the sensitivity of LCx was suboptimal, DNA of M. bovis was detected in 81.8% of the skin test-positive animals. Amplification techniques could provide a rapid and reasonably reliable tool for detecting bovine tuberculosis.     

Re-shaping the “original SIN”: a need to re-think sediment management and policy by introducing the “buffer zone” concept

Purpose

The effects of long-standing industrialization processes and poor environmental management practices have often left a harmful legacy for marine-coastal sites worldwide, causing a wide range of unforeseen impacts on the ecosystem and on human health. A critical revision of available data from three highly contaminated Italian sites (Augusta Bay, Sicily; Cagliari Gulf, Sardinia; Pozzuoli Bay, Campania) revealed the crucial role of biogeochemical/physical dynamics and potential widespread delivery of contaminants as key components for a wider comprehensive sediment management.

Materials and methods

Datasets of organic pollutants (ΣPAHs, ΣPCBs), heavy metals (As, Cd, Co, Cr, Cu, Hg, Ni, Pb, V, and Zn), radionuclides, and grain size composition of marine sediments of all three sites were critically reviewed and seafloor bathymetric data were analyzed.

Results and discussion

A critical review of available physical and chemical information of sediments collected from the three marine sites provides a better understanding of the physical and biogeochemical dynamics of large-scale dispersion of contaminants in those areas, as well as new insights in terms of improved sediments management policies with actions of larger scale monitoring of the “buffer zone” confining with the national relevance and highly contaminated site to trace inputs and accumulation effects of pollutants deriving from the point-source.

Conclusions

This study demonstrates how the presence of polluted sediments on the coastal areas can have, also after the closure of anthropogenic activities, a potential impact at a large scale. Then to better evaluate the effective impact, we suggest the adoption of a buffer zone contiguous to the national relevance sites (SIN) area. While SINs are optimized to define the state of the art of the near-source pollution, buffer zones may help to outline the rate of delivery of pollutants to the deep sea. Buffer zones must be designed by taking into account the local hydrodynamics, sedimentology, and geomorphology, and should be monitored, even if at a lower resolution, like SINs.

     

Conflicting outcomes of an integrated approach to sediment quality assessment in a Sardinian coastal area subjected to mining activities

Journal of Soils and Sediments - Multidisciplinary research was carried out to verify the best approach for a reliable assessment of sediment quality in marine areas affected by strong metal...     

Integrated approach of multiple environmental datasets for the assessment of sediment contamination in marine areas affected by long-lasting industrial activity: the case study of Bagnoli (southern Italy)

Purpose

The Bagnoli’s brownfield site (southern Italy) is an environmental priority for the Italian Government and is currently considered as a case study for the definition and application of innovative approaches to ecosystem recovery after a prolonged pollution history and eventual steel plant decommissioning.

Materials and methods

Here, we analyse high-quality datasets that constrain the distribution patterns and sources of contaminants in the coastal zone facing the site where the steel plant operated for almost one century. Innovative statistical approaches provide new insights into the temporal and spatial distribution of anthropogenic impacts, documented over the last 30 years, following lines of evidence emerging from investigations on grain size, TOC, heavy metals, PAHs, PCBs and high-resolution morpho-bathymetric information.

Results and discussion

The results derived from statistical analysis, referred also to the seafloor morphological variability, highlighted the presence of recent disposal of highly contaminated sediments and their potential pathways of dispersion to wider and deeper water zones.

Conclusions

The adopted multidisciplinary approach yields fundamental information towards an effective and proper ecosystem recovery of highly contaminated marine coastal areas and provides at the same time, a sound base for the refitting of decommissioned industrial plants.

     

Cadmium Affects the Interaction Between Peas and Root Nodule Bacteria

This study investigated the ability of Rhizobium soil inoculants isolated from cadmium (Cd)-contaminated soils to form effective symbioses with peas in the presence of Cd. With Cd present, certain isolates induced high pea dry matter production; an isolate, G, from 399-ppm Cd soil induced high nitrogen uptake and one from 33-ppm Cd, C, soil accelerated Cd uptake. Promising isolates regarding Cd response were used to inoculate various pea selects. Transmission electron microscope analyses showed differences in Cd tolerance between bacterial isolates and pea selects.