Influences of life history, environmental gradients, and disturbance on riparian tree regeneration in Western Oregon

In two related field studies: (1) a multiscale riparian forest inventory and (2) a comparative study of natural forest gap and nongap environments, we explored regeneration patterns of native riparian trees in relation to large- and small-scale ecological drivers in four western Oregon watersheds spanning a climatic gradient from dry to wet. Twenty-three tree species were classified by life history traits into five functional groups that differed in shade and drought tolerance; distribution and abundance of tree regeneration were analyzed by group. For most groups, seedling abundance varied substantially across the large scale climate gradient. In particular, drought tolerant species decreased sharply in abundance from the drier to wetter watersheds. Overall seedling frequency and diversity also decreased from the driest to wettest watersheds, while nurse log use increased. Regeneration of most, but not all, species was greater in gaps.Principal conclusions are that life history information was useful for categorizing species and quite predictive of regeneration behavior overall, yet for many species contextual factors such as climate, forest structure, and adjoining species were also very important. Species appeared to regenerate opportunistically wherever local conditions fell within their environmental tolerances and competitive abilities. Management or restoration of riparian forests, therefore, requires knowledge of site conditions, the life history of the riparian trees present, and in particular an understanding of the species’ environmental tolerances, disturbance responses, and competitive abilities relative to one another.     

Resistance to drought of mollusks of the genus Bulinus, vectors of human and animal trematode infections in Senegal. II. Study under natural conditions in the North-Sudan area. Ecology and resistance to drought of Bulinus umbilicatus and B. senegalensis

The authors report on the results of a 2-year study on the ecology and resistance to drought of B. umbilicatus and B. senegalensis on 3 temporary ponds in the North-Sudan area (region of Tambacounda, Senegal). The variations in some abiotic factors like the temperature and the pH of water do not seem to have a strong influence on the ecology while rainfall has a great importance on the distribution and the density of molluscs. As a fact, the quantity of water and the drying out period of these ponds depend upon rain factors which rule the existence and the survival of the malacological fauna. In the second part of the rainy season, the population reaches its maximum, i.e., during the reproduction period. Monthly observations show that the relative abundance of B. umbilicatus is higher than that of B. senegalensis. These ponds are dry during 6 to 8 months per year. However the populations of molluscs regenerate regularly, a fact which presupposes a certain ability to resist drought. Some come through this period successfully, but the middle-sized ones (7 to 9.9 mm) resist better than others (70 to 80 per cent of the population). Immediately after the first rains they resume their activity and lay intensively in order to reconstitute the population. B. umbilicatus and B. senegalensis are potential intermediate hosts for human and animal trematode infections, but in the studied region only B. umbilicatus intervenes in the transmission of S. haematobium and S. curassoni which occurs between September and November. Under natural Sahel conditions the epidemiological cycle is short and everything happens within 4 to 6 months with the regeneration and the growth of the population of molluscs, its infestation and the transmission of trematode infections. The ecological behaviour of these molluscs in the North-Sudan region is very important in the epidemiology of human and animal trematode infections and requires a new controlling strategy. The destruction of molluscs is more effective and more economic at the end of the rain season, which is the beginning of the drying of ponds, a period in which they concentrate in the residual water pools.     

Alien chromosome transmission and somatic elimination in monosomic addition lines of Gossypium australe F. Muell in G. hirsutum L.

The efficiency of using monosomic alien addition lines (MAALs) to introgress agronomical traits of interest carried by wild diploid Gossypium species into the main cultivated cotton species G. hirsutum depends on the opportunities of confronting the alien chromosome with the recipient background genome at each generation and on the occurrence of translocations and homoeologous recombinations. The selfed-progeny of five MAALs of G. australe in G. hirsutum was screened with SSR markers to determine the transmission frequency of the alien chromosome and monitor its integrity. Three MAALs revealed a transmission frequency significantly lower than the expected ratio and one MAAL presented an exclusive transmission of the additional chromosome. In these four MAAL the alien chromosome was transmitted almost unaltered. With the fifth MAAL the alien chromosome was normally transmitted but was altered in half of the plants carrying it. In one MAAL, normally carrying brown fiber, the emergence of some plants carrying white and brown fiber revealed the somatic elimination of the additional chromosome. The loss of this chromosome seems to be triggered by its deletion.     

Estimation of the density of the protocatechuate-degrading bacterial community in soil by real-time PCR

The β-ketoadipate pathway is the major route for degradation of aromatic compounds by various soil microorganisms. Protocatechuate 3,4-dioxygenase, a key enzyme of this pathway and which is encoded by pcaGH genes, catalyses the ring cleavage of protocatechuate. Microorganisms harbouring pcaGH genes are widely distributed in the environment but little is known about their relative abundance within the total microflora. Hence, this paper reports the development of a real-time PCR assay to quantify the bacterial pcaH sequence that encodes the β sub-unit of the protocatechuate 3,4-dioxygenase. This real-time PCR assay was linear over seven orders of magnitude with a calculated efficiency of 99% and sensitive up to 10² copies of the pcaH sequence per assay. Real-time PCR analyses performed on six soils with different physico-chemical properties, revealed pcaH densities ranging from 10³ to 10⁴ copies of pcaH  ng⁻¹ of soil DNA, which corresponded to approximately 0.2–10.9% of the total bacterial community. The sequencing of real-time PCR amplicons yielded 48 deduced amino acid sequences that exhibited 44–100% identity to known bacterial PcaH sequences, thereby confirming the accuracy of this real-time PCR assay.     

Heterosis and combining ability for yield and resistance to grain mold in tannin-free photoperiod-insensitive sorghum [Sorghum bicolor (L) Moench] in Senegal

Journal of Crop Science and Biotechnology - Increasing sorghum production per unit area in the farmer’s field by developing high yielding tannin-free and grain mold tolerant varieties in...     

Effects of single and dual inoculation with selected microsymbionts (rhizobia and arbuscular mycorrhizal fungi) on field growth and nitrogen fixation of <Emphasis Type="Italic">Calliandra calothyrsus</Emphasis> Meissn

Our study aimed to assess the effect of dual inoculation with the selected Rhizobium strain KWN35 and the arbuscular mycorrhizal isolate BEG 176 (Glomus etunicatum) on the growth of Calliandra calothyrsus cultivated under irrigation in the field in Senegal (Dakar) over a period of 24 months. Although plants inoculated with both microsymbionts grew better (height and root collar diameter) than plants from three other inoculation treatments (control, single inoculation with KWN35 or BEG 176), these results were not statistically different except at 1 and 5 months after field transplantation. KWN35 was present in a relatively high percentage of nodules harvested from plants inoculated with this rhizobial strain either alone or with mycorrhiza (approximately 60% and 40% 1 and 2 years after field transplantation respectively). The percentage of mycorrhizal root infections was around 60% in the inoculated plants after 12 months with significantly higher N, P and K foliar contents of trees compared with the non-inoculated controls. However, as for nodulation, by 24 months after transplantation, there were no significant differences between treatments. We conclude that field inoculation of C. calothyrsus with Rhizobium strain KWN35 and arbuscular mycorrhizal isolate BEG 176 did not have a long-lasting effect on the growth of trees, even when a majority of nodules were occupied by the inoculated rhizobia and the roots infected by the mycorrhiza. Several reasons can be postulated for these results, such as a possible effect of soil fertility on the efficiency of the nodules.     

Managing disturbance regimes to maintain biological diversity in forested ecosystems of the Pacific Northwest

Managing for biodiversity in Pacific Northwest forest ecosystems requires a means to predict the interactive effects of natural, introduced, and altered disturbance regimes. Although disturbances are known to be a determinant of patterns of biological diversity, disturbance and diversity principles have not been consistently applied in management of forest ecosystems in the Pacific Northwest. Here we review disturbance and diversity theory and develop a synthetic conceptual model for use in predicting the effects of disturbances of any origin on biodiversity, focusing on the Pacific Northwest. Disturbance principles have traditionally been applied to understanding patterns of species diversity, but they can also be applied to understanding the broader concept of biodiversity. Our conceptual model integrates these principles, illustrating relationships among mechanisms that limit species diversity and those that enhance it. Diversity-limiting factors are: environmental stress due to high levels of disturbance relative to productivity, and competitive exclusion that can arise where disturbance has been suppressed or managed to favor a particular species’ dominance. Conversely, biological diversity will be enhanced by disturbances that are not too frequent to be stressful, and that create functional heterogeneity (spatial and temporal variation in habitat structure and biological legacies that are vital for post-disturbance reproduction and growth). The three disturbance-related mechanisms that determine diversity operate over local to landscape spatial scales and ecological time scales and thus can be readily influenced by management. By comprehensively evaluating existing disturbance regimes and how they are influencing these factors, managers can help maintain or restore the ecological foundation for biodiversity. We describe management approaches to improve this foundation focusing on forests managed for multiple goals in the Pacific Northwest, where there is considerable potential for and interest in maintaining and enhancing biodiversity.     

Serogrouping of United States and some African serotypes of bluetongue virus using RT-PCR

The diagnostic potential of RT-PCR for detection of bluetongue virus (BTV) ribonucleic acid (RNA) sequence in cell culture and tissue samples from infected ruminants from United States, Sudan, South Africa and Senegal, was evaluated. The non structural protein 1 (NS1) gene of North American BTV serotype 11 was targeted for PCR amplification. The United States BTV serotypes 2, 10, 11, 13 and 17 and the Sudanese BTV serotypes 1, 2, 4 and 16 and BTV serotype 4 from South Africa and BTV serotype 2 from Senegal were studied. RNAs from all BTV field isolates used in this study, propagated in cell cultures, were detected by the described RT-PCR-based assay. The first specific 790bp BTV PCR products were amplified using a pair of outer primers (BTV1 and BTV2). Specificity of the PCR products was confirmed by a nested amplification of a 520bp PCR product using a pair of internal (nested) primers (BTV3 and BTV4). The BTV PCR products were visualized on ethidium bromide-stained agarose gels. Amplification products were not detected when the RT-PCR-based assay was applied to RNAs from closely related orbiviruses including, epizootic hemorrhagic disease virus (EHDV) prototypes serotypes 1, 2, 4; RNA from Sudanese isolate of palyam orbiviruses serogroup and total nucleic acid extracts from uninfected Vero cells. Application of the nested BTV RT-PCR to clinical samples resulted in amplification of BTV RNA from blood and serum samples from goats experimentally infected with BTV4 and from naturally infected sheep, goats, cattle and deer. The results of this study indicated that this RT-PCR assay could be applied for rapid detection of BTV, in cell culture and clinical samples from susceptible ruminants during an outbreak of the disease, in the United States and African.