Shifting cultivation effects on creek water quality around Barkal Upazila in Chittagong Hill Tracts, Bangladesh

We report the effects of shifting cultivation on water quality in 16 creeks investigated once in 2007 and twice in 2008 in 16 apparently similar small neighboring watersheds,each of 3 to 5 ha,at four locations around Barkal sub-district under Rangamati District of Chittagong Hill Tracts in Bangladesh.Concentrations of SO 4 2and K +,and pH in creek water were lower,and NO 3-N and Na + concentrations were higher in shifting-cultivation land compared to land with either plantation or natural forest or a combination of these cover types.Shifting cultivation effects on some water quality parameters were not significant due to change in land cover of the watershed between two sampling periods either through introduction of planted tree species or naturally regenerated vegetation.Conductivity and concentrations of HCO 3,PO 4 3,Ca 2+ and Mg 2+ in creek water showed no definite trend between shifting cultivation and the other land cover types.At one area near the Forest Range Office of Barkal,creek water pH was 5.8 under land cover with a combination of shifting cultivation and plantation.At this area Na + concentration in shifting-cultivation land ranged from 32.33 to 33.00 mg L-1 and in vegetated area from 25.00 to 30.50 mg L-1 in 2007.At another area,Chaliatali Chara,SO 4 2concentration in a shifting-cultivation watershed ranged from 4.46 to 10.51 mg L-1,lower than in a vegetated watershed that ranged from 11.69 to 19.98 mg L-1 in 2007.SO 4 2concentration in this shifting-cultivation area ranged from 1.28 to 1.37 mg L-1 and in the vegetated area from 1.37 to 3.50 mg L-1 in 2008.     

Water quality of Kaptai reservoir in Chittagong Hill Tracts of Bangladesh

A study was conducted in Kaptai reservoir, one of the largest man-made freshwater lakes of South-east Asia, to determine present status of water quality and its suitability for fishing and other uses. Water samplings were from middle part of the reservoir at 0.2 and 0.8 fractional depths at five different locations from upstream to downstream viz. Burburichara, Maichchari, Subolong, Basanthakum, and Rangamati. Water analyses show that concentrations of NO3-N, K+ and total P, and suspended solid at all the sampling stations were beyond the recommended values for fish culture. Concentrations of Na+, Ca2+, Mg2+, SO42-, Cl-, total dissolved solid (TDS), dissolved oxygen (DO) and chemical oxygen demand (COD) were within the standards for aquaculture. Concentrations of NO3-N, SO42-, K+ and total P showed no definite trend with depths, locations as well as rainy and dry seasons. Water pH, conductivity, Na+ and HCO3- contents were lower in rainy season, and DO and COD higher at almost all the locations in both the depths, compared with dry season. Total solids and concentrations of TDS, DO, COD, Ca2+, Mg2+ and Na+ were higher in upstream and decreased gradually towards downstream in the reservoir. Concentrations of DO and Ca2+ and pH were higher and Mg2+ less at 0.2-fractional depth than those at 0.8-fractional depth at almost all the locations. The reservoir is in mesotrophic condition containing high concentration of NO3-N and total P, in alarming status with the presence of excessive suspended solids from urban pollution around the town. It is necessary to adopt measures for protecting water quality in the reservoir due to such deteriorations.     

Land cover mapping of deciduous forest regions using ETM+ data: a case study of Azerbaijan Province,Iran

Up to date information about the existing land cover patterns and changes in land cover over time is one of the prime prerequisites for the preparation of an integrated development plan and economic development program of a region. By using ETM+ image data from 2002, we provided a land cover map of deciduous forest regions in Azerbaijan Province, Iran. Initial qualitative evaluation of the data showed no significant radiometric errors. Image classification was carried out using a maximum likelihood-based supervised classification method. In the end, we determined five major land cover classes, i.e., grass lands, deciduous broad-leaf forest, cultivated land, river and land without vegetation cover. Accuracy, estimated by the use of criteria such as overall accuracy from a confusion matrix of classification was 86% with a 0.88 Kappa coefficient. Such high accuracy results demonstrate that the combined use of spectral and textural characteristics increased the number of classes in the field classification, also with excellent accuracy. The availability and use of time series of remote sensing data permit the detection and quantification of land cover changes and improve our understanding of the past and present status of forest ecosystems.     

Screening of Iranian Potato Germplasm for Resistance to the Potato Tuberworm Phthorimaea operculella (Lepidoptera: Gelechiidae)

The potato tuberworm, Phthorimaea operculella (Zeller), is an important insect pest of potato, Solanum tuberosum L., both in storage and in the field. In this research, tubers of eight commercial potato cultivars and four Iranian selections with equal weight and dormancy were exposed to 10 pairs of adult P. operculella in a climate chamber set at 25?±?1 °C, 65?±?5 % RH and total darkness. In a free-choice situation, oviposition was lower on 397082–2, Khavaran and Morene compared to the other germplasm that were exposed to adults of P. operculella. Number of mines per tuber, length of mines per tuber, time of development of larvae, number of pre-pupae produced per tuber, weight of pre-pupae and number of eggs developed in ovaries per female were counted and/or measured on each commercial cultivar and selection. There were fewer and shorter mines on tubers of 397082–2, Khavaran and Morene compared to the other potato germplasm. The number of pre-pupae produced per tuber and the weight of pre-pupae were lower when P. operculella was reared on tubers of 397082–2, Khavaran and Morene. Also the development, survival and fecundity were lower when P. operculella was reared on those same germplasm. Flesh firmness was negatively correlated with larval survival (r ²?=?0.87); in addition, the percentage of starch and macronutrient composition was low on these three germplasm. Thus, tuber flesh firmness of these germplasm could delay larval penetration and lower establishment 397082–2, Khavaran and Morene showed promising traits that can be integral component of potato breeding for resistance to P. operculella and pest management programs.     

Cytogenetic and FMS-like tyrosine kinase 3 mutation analyses in acute promyelocytic leukemia patients

Background: The secondary genetic changes other than the promyelocytic leukemia-retinoic acid receptor (PML-RARA) fusion gene may contribute to the acute promyelocytic leukemogenesis. Chromosomal alterations and mutation of FLT3 (FMS-like tyrosine kinase 3) tyrosine kinase receptor are the frequent genetic alterations in acute myeloid leukemia. However, the prognostic significance of FLT3 mutations in acute promyelocytic leukemia (APL) is not firmly established. Methods: In this study, the chromosomal abnormalities were analyzed by bone marrow cytogenetic in 45 APL patients and FLT3 internal tandem duplications (ITD) screening by fragment length analysis and FLT3 D835 mutation by melting curve analysis were screened in 23 APL samples. Results: Cytogenetic study showed 14.3% trisomy 8 and 17.1% chromosomal abnormalities other than t(15;17). About 13% of the patients had FLT3 ITD, and 26% had D835 point mutation. FLT3 ITD mutation was associated with higher white blood cell count at presentation and poor prognosis. Conclusion: The PML-RARA translocation alone may not be sufficient to induce leukemia. Therefore, we assume that FLT3 mutations and the other genetic and chromosomal alterations may cooperate with PML-RARA in the development of APL disease.Key Words: Chromosome aberrations, FMS-like tyrosine kinase 3, Acute promyelocytic leukemia     

Genotype×tillage interaction and the performance of winter bread wheat genotypes in temperate and cold dryland conditions

Growing concerns for food security and the alleviation of hunger necessitate knowledge-based crop management technologies for sustainable crop production. In this study, 13 winter bread wheat genotypes (old, relatively old, modern, and breeding lines) were evaluated under three different tillage systems, i.e., conventional tillage (CT, full tillage with residue removed), reduced tillage (RT, chisel tillage with residue retained) and no-tillage (NT, no-tillage with residue retained on the soil surface) in farmer's fields under rainfed conditions using strip-plot arrangements in a randomized complete block design with three replications in the west of Iran (Kamyaran and Hosseinabad locations) over two cropping seasons (2018–2019 and 2019–2020).The main objectives were to investigate the effects of tillage systems and growing conditions on the agronomic characteristics, grain yield and stability performance of rainfed winter bread wheat genotypes.Significant (P<0.01) genotype×tillage system interaction effects on grain yield and agronomic traits suggested that the genotypes responded differently to the different tillage systems. The number of grains per spike and plant height were positively (P<0.0) associated with grain yield under the NT system, so they may be considered as targeted traits for future wheat breeding. Using statistical models, the modern cultivars (“Sadra” and “Baran”) were identified as high yielding and showed yield stability across the different tillage systems. As per each tillage system, genotype “Sadra” followed by “Zargana-6//Dari 1-7 Sabalan” exhibited higher adaption to CT; while cultivars “Jam” and “Azar2” showed better performance under the RT system; and cultivars “Varan” and “Baran” tended to have better performance expression in the NT condition.The increased grain yields achieved in combination with lower costs and greater profits from conservation agriculture suggest that adapted cultivar and NT systems should be evaluated and promoted more widely to farmers in the west of Iran as an attractive package of crop management technologies.In conclusion, variations in the performance of genotypes and the significant genotype×tillage system interaction effects on grain yield and some agronomic traits assessed in this study suggest that the development and selection of cultivars adapted to the NT system should be considered and included in the strategies and objectives of winter wheat breeding programs for the temperate and cold dryland conditions of Iran.     

土地覆盖对孟加拉国山区流域小溪和渗透水质量的影响

为了调查不同土地植被覆盖对水质量的影响,在孟加拉吉大港山区兰加马蒂的三个地区(Manikchari,Ghagra和Muralipara)对小溪和渗透水采集流动水样,进行化学分析。结果表明,在Manikchari地区,与自然植被和人工林混交植被相比,在成熟和幼年的石梓(Gmelina arborea)人工林植被流动的溪流水样中,SO2-、Ca2+的浓度和pH值较高 (p<0.05),Na+浓度较低。在Ghagra地区,与衰退的自然植被中的水域中采集的水样比较,在8年生的柚木(Tectona grandis)人工林水域流动的溪流水样中,有明显高浓度SO42-和K+、高传导率和高总溶解固体物,但HCO3-、NO3-和PO43-浓度明显较低。在Muralipara地区,与轮作地的渗透水中采集的水样相比,在自然植被和耕地混交地中采集的流动的溪流水样中,有明显高浓度的HCO3-、NO3-、Na-、k-、Ca2+和Mg2+,同时,其电导率和总溶解固体量也明显高于渗透水和轮作耕地管井水。表2参13。     

Considering and comparing regeneration in natural and man-made stands in northern Iran

In this study the regeneration diversity of Syahkal forests afforestated and natural stands in north of Iran was studied and compared from the point of view of evenness and diversity index.In order to accomplish this study two natural and man-made stands that almost are located in the same height above the sea level were chosen.The area of each stand was 30 ha and the inventory was done by the random-systematic method with a 5R land measurement(500 m2)selected.Also,in order to study the regeneration in the center of each sample piece 125 square meters micro plots were formed.The results show that regeneration diversity index in natural stands is more than that in man-made stands which in this case Mc-Arthur index with 2.41 has the most amount while Simpson index with 0.543 has the least amount.But the evenness indexes in man-made stands are more than that in natural stand which the main reason is the purity of the man-made stand.     

Strategic use of Iranian bread wheat landrace accessions for genetic improvement: Core set formulation and validation

Iranian wheat landrace accessions (IWAs) were collected from country‐wide farm fields and market places in 1935 by a professor at the University of Tehran and shared with University of California at Davis, California. IWAs were further submitted to the genebank of International Maize and Wheat Improvement Center (CIMMYT), Mexico. 2,403 IWAs from CIMMYT’s genebank were assayed by DArT‐seq technology to assess genetic diversity. No apparent ecogeographic patterns related to genetic diversity were detected, probably due to long‐term transport and frequent interchange of landraces among farmers. A multivariate clustering procedure combining genotypic and phenotypic information was used in selecting a core‐set, which represented 15% of the hexaploid wheat accessions included in this study. This subset captured an estimated 93% of rare (frequency <0.05) alleles. Multisite phenotypic data (India, Mexico) validated the ability of the core‐set in detecting useful variants. Potential donor accessions for multiple traits (disease resistance, zinc concentration) were identified from the core‐set for wheat‐breeding. This report illustrates a breeder friendly robust core‐set formulation strategy for harnessing the useful genetic variation stored in the genebanks.     

Grouping patterns of rainfed winter wheat test locations and the role of climatic variables

Soybean mosaic virus (SMV) is a member of genus Potyvirus, which causes worldwide soybean [Glycine max (L.) Merr.] yield loss and seed quality deterioration. It is of great significance to find new resistance loci and genes for cultivation of soybean variety. In the present study, a recombinant inbred line (RIL) population and a genome-wide association study (GWAS) panel, which contained 193 lines and 379 germplasms, respectively, were used for QTL mapping of resistance to SMV. Linkage mapping identified a major QTL, qSMV13, on chromosome 13, conferring resistance to SMV SC3 and SC7 strains, explaining phenotypic variations 71.21 and 76.59?%, respectively. The QTL qSMV13 was located close to the known SMV resistance loci Rsv1-h. GWAS analysis revealed five single nucleotide polymorphisms (SNPs) significantly associated with resistance to SC3 on chromosomes 2, 11, 13, 14 and 16. One of the SNP markers, ss715614844, was the right flanking marker of qSMV13. Combining linkage mapping and GWAS analysis enabled us to delimit qSMV13 in a 97.2-kb genomic region containing seven genes. A LRR-RLK protein was proposed as the candidate gene of qSMV13. These results provided selection markers and candidate genes for SMV resistance in soybean molecular breeding programs.