不同栽培类型蓝莓遗传多样性的SSR分析

以南方地区的蓝莓品种为主要对象,利用SSR标记分析现有品种种质的遗传多样性。设计合成了56对蓝莓SSR分子标记引物,进行扩增和多态性引物筛选,将多态性好的引物用于66份蓝莓不同类型种质的遗传多样性分析。结果表明,56对引物均能扩增出预期大小条带,其中条带清晰多态性较好的引物为25对,占比引物数的44.64%,多数引物扩增的位点数在5~7个之间。25对引物在66份蓝莓供试种质中检测多态性,共检测到165个等位变异,平均每个位点有6.6个等位变异,PIC值变幅为0.656~0.947,平均值为0.777。多态性最好的引物Vc26可以检测到15个等位基因数目。北方高丛、南方高丛和兔眼类型66份蓝莓种质的遗传相似系数位于0.60~0.96之间,品种间遗传差异较丰富。利用UPGMA聚类将3种类型种质进行分析,发现除了兔眼类型品种‘红粉佳人’外,其余明显分为3个类群,且同一类型的种质基本聚在一起。结合不同类型种质的系谱分析,发现分类与品种种质的遗传成分相似有一定的相关。研究利用SSR分子标记揭示了蓝莓不同类型种质的遗传多样性,对今后杂交育种亲本选择利用有一定借鉴意义。     

马铃薯镰刀菌干腐病研究进展及防控手段

马铃薯是世界第四大粮食作物。马铃薯干腐病是一种重要的马铃薯收获后真菌病害,在我国各马铃薯产区内广泛发生,导致马铃薯块茎的商品薯率大幅下降,对马铃薯的产量造成严重经济损失。本文针对马铃薯干腐病的症状、发生与危害、病原菌种类以及综合防控手段进行综述,以期为病害的研究及防治提供参考。     

Inhibiting fungus on largemouth bass eggs with copper sulfate and its toxicity to fry and juveniles

This study determined the effectiveness of copper sulfate (CuSO₄) to inhibit fungal growth (caused by Saprolegnia spp.) on largemouth bass (LMB) eggs spawned on/in fiber mats in very high-alkalinity/-hardness waters; experiments also determined the toxicity of CuSO₄ to LMB fry and juveniles. An untreated control and three CuSO₄ concentrations (10, 20, and 40 mg/L) were tested under a flow-through scenario in the effectiveness experiment. Eggs were treated daily until hatching began. Fungal load at the time of hatch had a total area > 3.0 cm² in the untreated controls, total area 1.0 to <2.0 cm² in the 10 and 20 mg/L CuSO₄ treatments, and total area > 1.0 cm² in the 40 mg/L CuSO₄ treatments. Fungus samples were identified as Saprolegnia australis. The 24-hr median lethal concentration (LC50) values on the LMB yolk-sac and swim-up fry were 32.0 and 4.6 mg/L CuSO₄, respectively; the No Observed Effect Concentrations (NOEC) were 16.0 and 0.125 mg/L CuSO₄, respectively. Juvenile LMB were extremely tolerant to CuSO₄, and their 24-hr LC50 value was 185.5 mg/L; the NOEC was 64 mg/L. This study indicates that CuSO₄ can be an important resource for hatcheries to control egg fungus, especially in high-alkalinity/-hardness waters.     

Clostridium bifermentans and C. subterminale are associated with kiwifruit vine decline,known as moria,in Italy

Since 2012, a new pathogenic syndrome has frequently been observed in many areas of kiwifruit cultivation in Italy. The main symptoms include an initial withering of the leaves followed by a total and sudden collapse of plants, mainly occurring during summer. The withered leaves fall and the main and secondary feeder roots appear rotten, sometimes showing a reddish-brown discoloration. The disease, that affects both the green and yellow-fleshed cultivars, has been called kiwifruit vine decline and is locally known as moria. The syndrome has been found consistently associated with soil waterlogging, which frequently occurs either after the traditional agronomical practice of irrigating orchards through surface irrigation or after very heavy rainfall. So far, the role played by bacteria in this syndrome has not been investigated. In the present study, Clostridium spp. were isolated from both rotten roots and soils obtained from Italian kiwifruit orchards affected by the syndrome, indicating for the first time that anaerobic bacteria are able to cause damage to woody crops. C. bifermentans and C. subterminale incited symptoms in kiwifruit in both in vivo and in vitro pathogenicity tests. Soil waterlogging seems to potentially favour colonization of kiwifruit roots by anaerobic bacteria, probably because saturation of the soil can facilitate proliferation and persistence of these bacteria during long periods of the vegetative growth of the crop. The occurrence of anaerobic bacteria does not exclude the possibility that other microorganisms can play additional/synergic role(s) in causing the kiwifruit vine decline.     

贝莱斯芽孢杆菌XC1的筛选、鉴定及其对苹果连作障碍的影响

从连作苹果园健康苹果树根际土壤中筛选出1株对苹果连作障碍镰孢属病原菌具有较强拮抗作用的细菌XC1,该菌对尖孢镰孢菌的抑菌率最高,达到79.83%。根据其形态、生理生化特征和基于16S rDNA、gyrA基因的系统发育分析,鉴定该菌为贝莱斯芽孢杆菌(Bacillus velezensis)。目前菌株XC1已保藏于中国微生物菌种保藏管理委员会普通微生物中心,保藏号为CGMCC No.20057。苹果连作土盆栽试验表明,XC1菌肥处理能显著促进平邑甜茶(Malus hupehensis Rehd.)幼苗的生长,其株高、地径、鲜质量和干质量分别比对照提高了54.8%、34.8%、121.1%和96.0%;显著提高连作土壤中的蔗糖酶、脲酶、过氧化氢酶和中性磷酸酶的活性,分别为对照的1.57倍、2.71倍、1.21倍和1.79倍;显著减少连作土壤中真菌的数量,提高细菌和放线菌的数量,且对尖孢镰孢菌(Fusarium oxysporum)有很好的抑制作用,尖孢镰孢菌的基因拷贝数比对照降低了76.4%。这说明贝莱斯芽孢杆菌抑制连作障碍病原菌的效果明显,可改善土壤环境,促进平邑甜茶幼苗的生长,能在一定程度上减轻苹果连作障碍。     

中草药与苯扎溴铵联用治疗车轮虫病的案例分析

车轮虫病是鱼类重要的常见纤毛虫病。近年来,对传统化学药物耐药的车轮虫和小车轮虫越来越多。本文介绍了复方中草药联合苯扎溴铵治疗河鲀、黄颡鱼和草鱼车轮虫病的典型案例,以期为类似病例治疗提供参考。     

Cryptic species and population genetic structure of Plasmopara viticola in São Paulo State,Brazil

Downy mildew (Plasmopara viticola) is one of the most important diseases in grape-growing areas worldwide, including Brazil. To examine pathogen population biology and structure, P. viticola was sampled during the 2015/16 growing season from 516 lesions on nine grape cultivars in 11 locations in subtropical areas of São Paulo State, Brazil. For identification of cryptic species, a subsample of 130 isolates was subjected to cleaved amplified polymorphic sequence (CAPS) analysis, and for 91 of these isolates the ITS1 region was sequenced. These analyses suggest that the population of P. viticola in São Paulo State consists of a single cryptic species, P. viticola clade aestivalis. Seven microsatellite markers were used to determine the genetic structure of all 516 P. viticola isolates, identifying 23 alleles and 55 multilocus genotypes (MLGs). Among these MLGs, 34.5% were clonal and represented 93% of the isolates sampled. Four dominant genotypes were present in at least five different locations, corresponding to 65.7% of the isolates sampled. Genotypic diversity (Ĝ = 0.21–0.89) and clonal fraction (0.58–0.96) varied among locations (populations). Most populations showed significant deviation from Hardy–Weinberg expectations; in addition, excess of heterozygosity was verified for many loci. However, principal coordinate analysis revealed no clusters among locations and no significant isolation by distance was found, suggesting high levels of migration. The results indicate that downy mildew epidemics result from multiple clonal infections caused by a few genotypes of P. viticola, and reproduction of P. viticola in São Paulo State is predominantly asexual.     

Comparative pathogenicity of Vibrio spp., Photobacterium damselae ssp. damselae and five isolates of Aeromonas salmonicida ssp. achromogenes in juvenile Atlantic halibut (Hippoglossus hippoglossus)

Juvenile Atlantic halibut (~100 mg, Hippoglossus hippoglossus) were exposed to Vibrio proteolyticus, a Vibrio spp. isolate, Photobacterium damselae ssp. damselae and five different isolates of Aeromonas salmonicida ssp. achromogenes via an hour‐long bath immersion to ascertain their variation in pathogenicity to this fish species. Results were analysed using Kaplan–Meier survival analysis. Analysis of the data from challenges using A. salmonicida ssp. achromogenes revealed three survival values of zero and a spread of values from 0 to 28.43. Challenges using a Vibrio spp isolate, V. proteolyticus and P. damselae resulted in Kaplan–Meier survival estimates of 31.21, 50.41 and 57.21, respectively. As all bacterial species tested could induce juvenile halibut mortalities, they must all be considered as potential pathogens. However, the degree of pathogenicity of A. salmonicida is isolate dependent.     

蝴蝶兰热激蛋白基因PhHsp70序列分析及对冷胁迫的响应

通过RT-PCR和RACE相结合的方法从蝴蝶兰叶片中克隆了一个热激蛋白基因PhHsp70 c DNA序列(Gen Bank登录号为MG214259),该基因全长为2 239 bp,编码647个氨基酸,与多种植物的HSP70基因具有94%以上的相似性;其编码蛋白包含HSP70结构域,属于胞质型HSP70;系统进化分析显示,该蛋白与铁皮石斛的HSP70蛋白亲缘关系最近;PhHsp70基因在营养器官和生殖器官中均有表达,其中在根中表达水平最高,在花器官中表达水平较低;PhHsp70基因在4℃冷胁迫处理0.5 h表达水平下降,冷胁迫1 h后,表达水平升高,在处理24 h时表达水平最高。由此推测,PhHsp70基因参与蝴蝶兰4℃冷胁迫的生理反应。研究结果可为研究蝴蝶兰热激蛋白在低温胁迫响应中的调控机理提供理论基础。     

Survey of viruses infecting open‐field pepper crops in Côte d'Ivoire and diversity of Pepper veinal mottle virus and Cucumber mosaic virus

The prevalence of viruses in pepper crops grown in open fields in the different agro‐ecological zones (AEZs) of Côte d'Ivoire was surveyed. Pepper veinal mottle virus (PVMV; genus Potyvirus) and Cucumber mosaic virus (CMV; genus Cucumovirus) were the most frequent viruses among those surveyed, while tobamoviruses (genus Tobamovirus) were detected at low frequency. PVMV showed a high heterogeneity across AEZs, which may be related to climatic, ecological or agronomical conditions, whereas CMV was more homogeneously distributed. The molecular diversity of CMV and PVMV were analysed from partial genome sequences. Despite the low number of CMV isolates characterized, two molecular groups were revealed, one corresponding to subgroup IA and the other to reassortants between subgroups IA and IB. RNAs 1 and 3 of the reassortants clustered with the IB subgroup of CMV isolates, whereas their RNA 2 clustered with the IA subgroup. Importantly, RNA 1 of CMV isolates of the IB subgroup has been shown to be responsible for adaptation to pepper resistance. The diversity of PVMV in the VPg‐ and coat protein‐coding regions revealed multiple clades. The central part of the VPg showed a high level of amino acid diversity and evidence of positive selection, which may be a signature of adaptation to plant recessive resistance. As a consequence, for efficient deployment of resistant pepper cultivars, it would be desirable to examine the occurrence of virulent isolates in the CMV or PVMV populations in Côte d'Ivoire and to follow their evolution as the resistance becomes more widely deployed.