鱼类组蛋白核苷酸的多态性及其在杀鱼爱德华氏菌感染中的作用

组蛋白是染色体核小体的重要组分,在调控染色质结构、基因转录、个体发育等不同生物学过程中起着重要作用。为了研究鱼类组蛋白基因是否存在核苷酸的多态性以及组蛋白核苷酸多态性是否会影响鱼类的抗病力,本实验以斑马鱼和草鱼为研究对象,通过PCR扩增克隆了组蛋白H2A的全长开放阅读框;利用过表达技术、菌落平板计数、感染存活分析以及荧光定量PCR技术,研究了斑马鱼和草鱼组蛋白H2A核苷酸多态性不同变异体在杀鱼爱德华氏菌感染中的作用。在本研究中,实验发现鱼类组蛋白H2A存在着丰富的核苷酸多态性。序列分析结果显示斑马鱼和草鱼组蛋白H2A核苷酸多态性的变异体核苷酸序列相似性为90%～100%;而两两H2A核苷酸多态性变异体氨基酸序列之间最多只有3个位点存在差异。通过体内和体外抗菌实验可知,斑马鱼和草鱼组蛋白H2A核苷酸的多态性显著影响H2A的抗菌活性。此外,筛选出的抗菌组蛋白H2A核苷酸多态性的变异体在斑马鱼体内的过表达,不仅具有免疫增强的作用,还能显著增强斑马鱼对杀鱼爱德华氏菌感染的抗病力。本研究为筛选具有抗病作用的组蛋白H2A免疫保护原奠定了重要基础。     

Effect of different feeds on the growth,survival and reproductive performance of zebrafish,Danio rerio (Hamilton, 1822)

Present experiment was conducted to determine the effect of different feeds with varying protein levels on the growth, survival and reproductive performance of zebrafish, Danio rerio. The control diet (T1) was wild‐collected zooplankton from local fish ponds, while test diets with 350 g kg^?1 protein (T2), 400 g kg^?1 protein (T3) and 450 g kg^?1 protein (T4) were formulated and fed to fish for a period of 210 days. The significantly (P < 0.05) highest mean weight gain and specific growth rate were observed in T1, which were similar with T3 and T4. The significantly (P < 0.05) highest number of egg production per female and relative fecundity were found in T1, followed by T4 and T3 while T2 produced lowest number of eggs. No significant (P > 0.05) differences were observed in brood survival rate, fertilization and hatching rate among the dietary treatments. The highest (P < 0.05) fry survival rate was recorded in T1, followed by T3 and T4. Thus, it is suggested that control diet i.e. mixed zooplankton exhibited better growth, reproductive performance and fry survival rate. However, diet containing 400 g kg^?1 crude protein also gave comparable results in terms of growth, survival and reproductive performance of zebrafish.     

First report of Fusarium oxysporum species complex infection in zebrafish culturing system

Fusarium oxysporum species complex (FOSC) is a highly diverse fungus. Recently, F. oxysporum infection was identified from zebrafish (Danio rerio) culturing system in Korea. Initially, a rapid whitish smudge was appeared in the water with the fungal blooming on walls of fish tanks. Microscopic studies were conducted on fungal hyphae, colony pigmentation and chlamydospore formation and the presence of macro‐ and microspores confirmed that the isolated fungus as F. oxysporum. Furthermore, isolated F. oxysporum was confirmed by internal transcribed spacer sequencing which matched (100%) to nine F. oxysporum sequences available in GenBank. Experimental hypodermic injection of F. oxysporum into adult zebrafish showed the development of fungal mycelium and pathogenicity similar to signs observed. Histopathologic results revealed a presence of F. oxysporum hyphae in zebrafish muscle. Fusarium oxysporum growth was increased with sea salt in a concentration‐dependent manner. Antifungal susceptibility results revealed that F. oxysporum is resistant to copper sulphate (up to 200 μg mL^?1) and sensitive to nystatin (up to 40 μg mL^?1). This is the first report of FOSC from zebrafish culture system, suggesting it appears as an emerging pathogen, thus posing a significant risk on zebrafish facilities in the world.     

Effects of prebiotic mannan oligosaccharide on the growth,survival, and anxiety-like behaviors of zebrafish (Danio rerio)

A study was designed to investigate the possible positive prebiotic effects of mannan oligosaccharides (MOS) on growth and reduction of anxiety behaviors in zebrafish (Danio rerio). The experimental diets were supplemented with 0, 2, 4, 6, or 8 g MOS kg^?1 and were fed to juvenile fish (0.47 ± 0.017 g) in triplicates for six weeks. Significant differences were found in the final body weight, body weight intake, percent body weight intake, and specific growth rate among treatments. The regression analyses showed that the optimum MOS level was 4–4.1 g MOS kg^?1 diet. Fish fed 4 g MOS kg^?1 feed showed higher survival than the other treatments. Also, using the novel tank test, fish fed with 4 g MOS kg^?1 diet showed lower anxiety by swimming in the upper portion of the tank. The other behavior parameters remained unaffected by the prebiotic. The results indicated the beneficial effect of the prebiotic MOS on growth and partly on welfare of zebrafish juveniles.     

低温驯化下斑马鱼LINE1的表达检测

长散布核元件-1(Long spread nuclear element-1,LINE1)是跳跃基因。前期比较基因组研究发现,南极鱼经历漫长的低温适应进化后,与南极圈外的同亚目鱼类相比较,在基因水平上LINE1的扩增效率高达8~300倍,但LINE1的扩增与鱼类抵御寒冷之间的关系尚未明了。本实验对斑马鱼(Danio rerio)胚胎成纤维细胞ZF4进行了不同时间梯度的低温处理(18℃、5 d和18℃、30 d),同时对斑马鱼成鱼也进行了不同时间的低温处理(10℃,3 h、6 h、1 d、3 d、5 d)。采用RT-qPCR检测了LINE1的mRNA水平,并克隆了斑马鱼LINE1基因启动子区,利用Luciferase双荧光报告系统,在ZF4细胞中验证LINE15’UTR在低温压力下的生物活性。结果显示,短时间低温处理下,ZF4细胞中LINE1 mRNA水平有所降低,而在长时间低温处理中,LINE1的mRNA水平显著升高。在成鱼中,短时间低温处理下,LINE1 mRNA水平降低;长期低温处理下,LINE1 mRNA水平显著升高。在ZF4细胞中发现,LINE15’UTR具有生物活性。在低温处理(18℃,3 d)下,报告基因信号减弱,间接表明LINE1启动子活性减弱。研究结果表明,低温压力会影响LINE1在鱼类中的表达。本研究为进一步探究LINE1在鱼类适应低温环境中的作用机制奠定了基础。     

谷甾醇对斑马鱼生长发育和生殖的影响

为了研究谷甾醇(sitosterol)暴露对斑马鱼(Barchydanio rerio var)内分泌的干扰效应,通过不同浓度的谷甾醇(50、100、150、200μg/L)对雌性斑马鱼进行为期60 d的水浴暴露,同时设乙醇对照,分别于60 d后测定各组分雌性斑马鱼的生长指标,对部分组织进行切片观察,从组织病理学和毒理学方面评估谷甾醇暴露的毒性效应。结果表明:在200μg/L谷甾醇暴露下,斑马鱼全部死亡,其他各浓度处理与对照组相比,除臀鳍数随谷甾醇浓度的增加呈现倒"U"型趋势,以及肝重随谷甾醇浓度的增加而上升外,其他各生长指标均不同程度受到抑制,抑制作用与暴露浓度呈明显的剂量效应。此外,性腺指数(GSI)呈下降趋势,肝体指数(HSI)呈上升趋势,各组织切片也表现出明显的毒性反应。因此,可初步判断谷甾醇对斑马鱼的生长发育和繁殖系统会产生较大影响。     

甲氰菊酯对斑马鱼的毒性效应

选用模式生物斑马鱼(Brachydanio rerio)作为毒性实验动物,探索甲氰菊酯(fenpropathrin)对鱼类的毒性效应,为农业生产和环境保护提供参考数据。结果显示甲氰菊酯对斑马鱼成鱼96h LC50为3.38×10-3mg/kg,属于剧毒级,安全浓度为0.34×10-3mg/kg;较低浓度下甲氰菊酯对斑马鱼早期发育影响不显著,在较高浓度1、10mg/kg下,斑马鱼96h畸形率分别达到84%和90%,心包囊肿率分别为25%和88%,而致死效应不明显。亚致死剂量下甲氰菊酯对斑马鱼肝胰脏GPT、GOT、SOD活性有明显诱导效应,在高浓度和长时间暴露下诱导效应降低;肝胰脏中AChE活性显著地受到甲氰菊酯的抑制,抑制效应对毒物的浓度和染毒时间有良好的依赖性,是一种良好的环境污染检测生物学指标。     

Characterization of two microparticle types for delivery of food to altricial fish larvae

The characteristics of two microparticulate types were determined for delivery of nutrients to fish larvae. A yeast-based commercial diet for larval fish (Microfeast Plus L-10, Salt Creek, Inc., Salt Lake City, UT, USA) was encapsulated within cross-linked protein-walled capsules (CLPWC) or gelatin-alginate beads (GAB). Microparticle stability was determined by encapsulating a nontoxic red dye (Poly R 478) within CLPWC or GAB. The stabilities of both particle types suggested that high molecular weight, water-soluble nutrients could be delivered to freshwater fish larvae without major losses from leaching. Acceptability experiments included determination of gut fullness and feeding incidence of zebrafish Brachydanio rerio larvae fed on the two particle types. Acceptability of GAB by first-feeding zebrafish larvae was significantly greater than that for CLPWC. Acceptability of CLPWC increased in larger larvae and was similar to that for GAB. Both particle types were broken down by first-feeding zebrafish larvae. Growth experiments with CLPWC showed that up to 40% substitution of Artemia nauplii could be accomplished without reduced growth and survival of zebrafish larvae after a feeding period of 8 days. Twenty per cent substitution of Artemia nauplii could be achieved with GAB without reduced growth and survival.     

jnk3基因在金鱼和斑马鱼不同发育时期胚胎与成体不同组织中的分化表达

JNKs是丝裂原活化蛋白激酶(MAPK)家族重要成员,参与应激反应和动物体轴的构建。为了进一步了解JNK家族在动物发育中的功能,首次分离和克隆了金鱼jnk3基因,研究了jnk3在金鱼和斑马鱼组织特异性和胚胎发育特异性表达状况。金鱼jnk3基因cDNA总长1 794 bp,其中阅读框1 293 bp,编码430个氨基酸。对jnk3基因序列及其推导的氨基酸序列进行同源性分析,结果显示,jnk3基因在脊椎动物较为保守,金鱼jnk3基因核苷酸序列与斑马鱼、人的同源性分别为94.1%和80.7%,金鱼jnk3基因氨基酸序列与斑马鱼、人的同源性分别为99.7%和93.4%。jnk3基因在鱼类成体中的表达存在着显著的组织差异,在金鱼和斑马鱼脑和精巢组织的表达具专一性,此外在斑马鱼心脏中也检测到jnk3的表达。RT-PCR检测结果显示,在鱼类胚胎发育中,神经胚期开始检测到jnk3基因mRNA表达,从神经胚到心跳期胚胎,jnk3基因表达水平逐渐增高,此后直至出膜一直保持较高的表达水平。研究表明,jnk3基因可能在鱼类后期的胚胎发育和成体脑、精巢与心脏发育中具有重要作用。     

斑马鱼CDKAL1基因的生物信息学分析

[目的]深入了解斑马鱼CDKAL1基因的结构特点。[方法]运用生物信息学方法对斑马鱼CDKAL1基因的基因序列、编码蛋白的理化性质、结构及功能进行分析。[结果]分析结果显示,此基因一部分存在于细胞质,并存在一个跨膜结构域,没有信号肽。该基因编码蛋白质的变异不大;含有3个功能结构域,均为Erk D-domain,分别位于L189L、384、V315;在Y292位置有一磷酸化位点;有UPF0004超家族、Radical SAM超家族和MiaB结构域3个保守结构域;在脑、肌肉、肾脏中表达。推测该基因表达的蛋白质可能是酶、异构酶或者中间代谢产物,与胰岛素受体的作用有关。[结论]该研究为今后进一步研究人类Ⅱ型糖尿病提供了科学依据。